RNA–Protein interactions for RNA: ENST00000465278.2

CACNA1C-223, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 3

Gene CACNA1C, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-223ENST00000465278 HOXB1P14653 301 aaPredicted RBP10.7□□□□□ -0.7
CACNA1C-223ENST00000465278 ZDHHC16Q969W1 377 aa10.7□□□□□ -0.7
CACNA1C-223ENST00000465278 PTGDRQ13258 359 aa10.68□□□□□ -0.7
CACNA1C-223ENST00000465278 C6orf132Q5T0Z8 1188 aa10.68□□□□□ -0.7
CACNA1C-223ENST00000465278 FBXW7Q969H0 707 aa10.68□□□□□ -0.7
CACNA1C-223ENST00000465278 ADAM33Q9BZ11 813 aa10.68□□□□□ -0.7
CACNA1C-223ENST00000465278 NPDC1Q9NQX5 325 aaPredicted RBP10.68□□□□□ -0.7
CACNA1C-223ENST00000465278 GNPATO15228 680 aa10.66□□□□□ -0.7
CACNA1C-223ENST00000465278 AK7Q96M32 723 aa10.66□□□□□ -0.7
CACNA1C-223ENST00000465278 HIC1Q14526 733 aa10.65□□□□□ -0.7
CACNA1C-223ENST00000465278 FAM163AQ96GL9 167 aaPredicted RBP10.65□□□□□ -0.7
CACNA1C-223ENST00000465278 BICRAQ9NZM4 1560 aa10.65□□□□□ -0.71
CACNA1C-223ENST00000465278 ST18O60284 1047 aa10.63□□□□□ -0.71
CACNA1C-223ENST00000465278 MINK1Q8N4C8 1332 aaPredicted RBP10.62□□□□□ -0.71
CACNA1C-223ENST00000465278 IRF6O14896 467 aa10.62□□□□□ -0.71
CACNA1C-223ENST00000465278 PPP4R3BQ5MIZ7 849 aa10.62□□□□□ -0.71
CACNA1C-223ENST00000465278 NEUROD2Q15784 382 aa10.61□□□□□ -0.71
CACNA1C-223ENST00000465278 MARVELD3Q96A59 401 aa10.61□□□□□ -0.71
CACNA1C-223ENST00000465278 TRIM66O15016 1216 aa10.6□□□□□ -0.71
CACNA1C-223ENST00000465278 BRPF1P55201 1214 aaPredicted RBP10.6□□□□□ -0.71
CACNA1C-223ENST00000465278 PSDA5PKW4 1024 aaPredicted RBP10.59□□□□□ -0.71
CACNA1C-223ENST00000465278 MAP2K5Q13163 448 aa10.59□□□□□ -0.71
CACNA1C-223ENST00000465278 ERBB3P21860 1342 aa10.58□□□□□ -0.71
CACNA1C-223ENST00000465278 COL9A1P20849 921 aa10.58□□□□□ -0.72
CACNA1C-223ENST00000465278 FAM161AQ3B820 660 aa10.58□□□□□ -0.72
CACNA1C-223ENST00000465278 CCDC102AQ96A19 550 aa10.58□□□□□ -0.72
CACNA1C-223ENST00000465278 BCL2L12Q9HB09 334 aa10.57□□□□□ -0.72
CACNA1C-223ENST00000465278 VARS2Q5ST30 1063 aaKnown RBP10.56□□□□□ -0.72
CACNA1C-223ENST00000465278 PTPREP23469 700 aa10.55□□□□□ -0.72
CACNA1C-223ENST00000465278 PADI6Q6TGC4 694 aa10.55□□□□□ -0.72
CACNA1C-223ENST00000465278 EMP3P54852 163 aa10.54□□□□□ -0.72
CACNA1C-223ENST00000465278 PDE4DQ08499 809 aa10.54□□□□□ -0.72
CACNA1C-223ENST00000465278 CERKQ8TCT0 537 aa10.54□□□□□ -0.72
CACNA1C-223ENST00000465278 GPBP1L1Q9HC44 474 aaPredicted RBP10.54□□□□□ -0.72
CACNA1C-223ENST00000465278 FAM205CA6NFA0 338 aa10.53□□□□□ -0.72
CACNA1C-223ENST00000465278 PRSS12P56730 875 aa10.53□□□□□ -0.72
CACNA1C-223ENST00000465278 CDCA7LQ96GN5 454 aa10.53□□□□□ -0.72
CACNA1C-223ENST00000465278 KCNK17Q96T54 332 aa10.53□□□□□ -0.72
CACNA1C-223ENST00000465278 PSEN2P49810 448 aa10.51□□□□□ -0.73
CACNA1C-223ENST00000465278 AXIN2Q9Y2T1 843 aa10.51□□□□□ -0.73
CACNA1C-223ENST00000465278 FAM198AQ9UFP1 575 aa10.5□□□□□ -0.73
CACNA1C-223ENST00000465278 PPP1R3GB7ZBB8 358 aa10.48□□□□□ -0.73
CACNA1C-223ENST00000465278 POTEEQ6S8J3 1075 aa10.48□□□□□ -0.73
CACNA1C-223ENST00000465278 NLRP7Q8WX94 980 aa10.48□□□□□ -0.73
CACNA1C-223ENST00000465278 PHOX2BQ99453 314 aa10.48□□□□□ -0.73
CACNA1C-223ENST00000465278 POTEB3A0JP26 581 aa10.47□□□□□ -0.73
CACNA1C-223ENST00000465278 PROX2Q3B8N5 592 aa10.47□□□□□ -0.73
CACNA1C-223ENST00000465278 POTEBQ6S5H4 581 aa10.47□□□□□ -0.73
CACNA1C-223ENST00000465278 TTC13Q8NBP0 860 aa10.47□□□□□ -0.73
CACNA1C-223ENST00000465278 KDM4CQ9H3R0 1056 aa10.47□□□□□ -0.73
CACNA1C-223ENST00000465278 TSKSQ9UJT2 592 aa10.47□□□□□ -0.73
CACNA1C-223ENST00000465278 ADGRG1Q9Y653 693 aa10.47□□□□□ -0.73
CACNA1C-223ENST00000465278 NACADO15069 1562 aa10.47□□□□□ -0.73
CACNA1C-223ENST00000465278 IL27Q8NEV9 243 aa10.46□□□□□ -0.73
CACNA1C-223ENST00000465278 EIF4G1Q04637 1599 aaKnown RBP10.45□□□□□ -0.74
CACNA1C-223ENST00000465278 C3orf80F5H4A9 247 aa10.45□□□□□ -0.74
CACNA1C-223ENST00000465278 ARHGAP33O14559 1287 aa10.45□□□□□ -0.74
CACNA1C-223ENST00000465278 OATP04181 439 aa10.45□□□□□ -0.74
CACNA1C-223ENST00000465278 TTLL12Q14166 644 aaPredicted RBP10.45□□□□□ -0.74
CACNA1C-223ENST00000465278 LCE2DQ5TA82 110 aaPredicted RBP10.45□□□□□ -0.74
CACNA1C-223ENST00000465278 KCNH8Q96L42 1107 aa10.45□□□□□ -0.74
CACNA1C-223ENST00000465278 AMHR2Q16671 573 aa10.44□□□□□ -0.74
CACNA1C-223ENST00000465278 DMRTA1Q5VZB9 504 aa10.44□□□□□ -0.74
CACNA1C-223ENST00000465278 HS3ST6Q96QI5 342 aa10.44□□□□□ -0.74
CACNA1C-223ENST00000465278 REPIN1Q9BWE0 567 aaKnown RBP10.44□□□□□ -0.74
CACNA1C-223ENST00000465278 TRIM6-TRIM34B2RNG4 842 aa10.43□□□□□ -0.74
CACNA1C-223ENST00000465278 MDM2Q00987 491 aaPredicted RBP10.43□□□□□ -0.74
CACNA1C-223ENST00000465278 NUDT18Q6ZVK8 323 aa10.43□□□□□ -0.74
CACNA1C-223ENST00000465278 METTL3Q86U44 580 aaKnown RBP10.43□□□□□ -0.74
CACNA1C-223ENST00000465278 PARP9Q8IXQ6 854 aa10.43□□□□□ -0.74
CACNA1C-223ENST00000465278 ZNF687Q8N1G0 1237 aa10.43□□□□□ -0.74
CACNA1C-223ENST00000465278 PXYLP1Q8TE99 480 aa10.43□□□□□ -0.74
CACNA1C-223ENST00000465278 RBM27Q9P2N5 1060 aaKnown RBP10.43□□□□□ -0.74
CACNA1C-223ENST00000465278 SMAPO00193 183 aa10.42□□□□□ -0.74
CACNA1C-223ENST00000465278 TMEM132AQ24JP5 1023 aa10.42□□□□□ -0.74
CACNA1C-223ENST00000465278 PACS2Q86VP3 889 aa10.42□□□□□ -0.74
CACNA1C-223ENST00000465278 KIAA1468Q9P260 1216 aa10.42□□□□□ -0.74
CACNA1C-223ENST00000465278 TATDN2Q93075 761 aa10.41□□□□□ -0.74
CACNA1C-223ENST00000465278 ZBED2Q9BTP6 218 aa10.41□□□□□ -0.74
CACNA1C-223ENST00000465278 PNMA3Q9UL41 463 aa10.41□□□□□ -0.74
CACNA1C-223ENST00000465278 RBM46Q8TBY0 533 aaKnown RBP10.4□□□□□ -0.74
CACNA1C-223ENST00000465278 FAM117AQ9C073 453 aa10.4□□□□□ -0.74
CACNA1C-223ENST00000465278 EYA1Q99502 592 aa10.39□□□□□ -0.75
CACNA1C-223ENST00000465278 GIGYF2Q6Y7W6 1299 aaKnown RBP10.38□□□□□ -0.75
CACNA1C-223ENST00000465278 SHROOM4Q9ULL8 1493 aa10.37□□□□□ -0.75
CACNA1C-223ENST00000465278 CLCN1P35523 988 aa10.37□□□□□ -0.75
CACNA1C-223ENST00000465278 RCCD1A6NED2 376 aa10.36□□□□□ -0.75
CACNA1C-223ENST00000465278 TMUB1Q9BVT8 246 aa10.36□□□□□ -0.75
CACNA1C-223ENST00000465278 ERCC6Q03468 1493 aa10.36□□□□□ -0.75
CACNA1C-223ENST00000465278 NBPF26B4DH59 902 aa10.35□□□□□ -0.75
CACNA1C-223ENST00000465278 ONECUT3O60422 494 aaPredicted RBP10.35□□□□□ -0.75
CACNA1C-223ENST00000465278 MS4A1P11836 297 aa10.35□□□□□ -0.75
CACNA1C-223ENST00000465278 SSTR3P32745 418 aaPredicted RBP10.35□□□□□ -0.75
CACNA1C-223ENST00000465278 PBX2P40425 430 aa10.35□□□□□ -0.75
CACNA1C-223ENST00000465278 GPCPD1Q9NPB8 672 aa10.35□□□□□ -0.75
CACNA1C-223ENST00000465278 VPS9D1Q9Y2B5 631 aa10.34□□□□□ -0.75
CACNA1C-223ENST00000465278 SEPT9Q9UHD8 586 aaPredicted RBP10.33□□□□□ -0.76
CACNA1C-223ENST00000465278 RABGEF1Q9UJ41 708 aa10.32□□□□□ -0.76
CACNA1C-223ENST00000465278 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.31□□□□□ -0.76
CACNA1C-223ENST00000465278 PLEKHG3A1L390 1219 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms