RNA–Protein interactions for RNA: ENST00000465043.1

SCN3A-206, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 4

Gene SCN3A, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-206ENST00000465043 HCSTQ9UBK5 93 aa8.63□□□□□ -1.03
SCN3A-206ENST00000465043 ZBED2Q9BTP6 218 aa8.62□□□□□ -1.03
SCN3A-206ENST00000465043 NBPF3Q9H094 633 aa8.61□□□□□ -1.03
SCN3A-206ENST00000465043 ONECUT3O60422 494 aaPredicted RBP8.58□□□□□ -1.04
SCN3A-206ENST00000465043 GOLGA8CPA6NN73 597 aa8.57□□□□□ -1.04
SCN3A-206ENST00000465043 BHMG1C9JSJ3 638 aaPredicted RBP8.57□□□□□ -1.04
SCN3A-206ENST00000465043 C6orf132Q5T0Z8 1188 aa8.57□□□□□ -1.04
SCN3A-206ENST00000465043 MRPL50Q8N5N7 158 aaKnown RBP8.57□□□□□ -1.04
SCN3A-206ENST00000465043 DDX12PQ92771 950 aa8.57□□□□□ -1.04
SCN3A-206ENST00000465043 TSHZ2Q9NRE2 1034 aa8.56□□□□□ -1.04
SCN3A-206ENST00000465043 RABGEF1Q9UJ41 708 aa8.56□□□□□ -1.04
SCN3A-206ENST00000465043 EN1Q05925 392 aaPredicted RBP8.55□□□□□ -1.04
SCN3A-206ENST00000465043 NBR1Q14596 966 aa8.55□□□□□ -1.04
SCN3A-206ENST00000465043 ARHGEF1Q92888 912 aaKnown RBP8.54□□□□□ -1.04
SCN3A-206ENST00000465043 KCTD12Q96CX2 325 aaKnown RBP8.54□□□□□ -1.04
SCN3A-206ENST00000465043 MAP3K7O43318 606 aa8.53□□□□□ -1.04
SCN3A-206ENST00000465043 COL9A1P20849 921 aa8.53□□□□□ -1.04
SCN3A-206ENST00000465043 LAPTM4BQ86VI4 370 aa8.53□□□□□ -1.04
SCN3A-206ENST00000465043 CERKQ8TCT0 537 aa8.53□□□□□ -1.04
SCN3A-206ENST00000465043 RBM33Q96EV2 1170 aaKnown RBP8.53□□□□□ -1.04
SCN3A-206ENST00000465043 P3H3Q8IVL6 736 aa8.52□□□□□ -1.05
SCN3A-206ENST00000465043 PLCB2Q00722 1185 aa8.51□□□□□ -1.05
SCN3A-206ENST00000465043 WNT2BQ93097 391 aa8.5□□□□□ -1.05
SCN3A-206ENST00000465043 GRXCR2A6NFK2 248 aa8.49□□□□□ -1.05
SCN3A-206ENST00000465043 TRIM6-TRIM34B2RNG4 842 aa8.49□□□□□ -1.05
SCN3A-206ENST00000465043 PROX2Q3B8N5 592 aa8.49□□□□□ -1.05
SCN3A-206ENST00000465043 ANKK1Q8NFD2 765 aa8.49□□□□□ -1.05
SCN3A-206ENST00000465043 THSD4Q6ZMP0 1018 aa8.48□□□□□ -1.05
SCN3A-206ENST00000465043 PACS2Q86VP3 889 aa8.48□□□□□ -1.05
SCN3A-206ENST00000465043 KIAA1468Q9P260 1216 aa8.48□□□□□ -1.05
SCN3A-206ENST00000465043 PLA2G2EQ9NZK7 142 aa8.46□□□□□ -1.06
SCN3A-206ENST00000465043 OSBPP22059 807 aa8.45□□□□□ -1.06
SCN3A-206ENST00000465043 FAM98CQ17RN3 349 aaKnown RBP8.45□□□□□ -1.06
SCN3A-206ENST00000465043 TSR1Q2NL82 804 aaKnown RBP8.45□□□□□ -1.06
SCN3A-206ENST00000465043 KCNV2Q8TDN2 545 aa8.45□□□□□ -1.06
SCN3A-206ENST00000465043 PTPN5P54829 565 aa8.44□□□□□ -1.06
SCN3A-206ENST00000465043 NYAP1Q6ZVC0 841 aa8.44□□□□□ -1.06
SCN3A-206ENST00000465043 RBM27Q9P2N5 1060 aaKnown RBP8.44□□□□□ -1.06
SCN3A-206ENST00000465043 PRSS12P56730 875 aa8.43□□□□□ -1.06
SCN3A-206ENST00000465043 ZFRQ96KR1 1074 aaKnown RBP8.43□□□□□ -1.06
SCN3A-206ENST00000465043 CDCA7LQ96GN5 454 aa8.42□□□□□ -1.06
SCN3A-206ENST00000465043 SOWAHBA6NEL2 793 aa8.41□□□□□ -1.06
SCN3A-206ENST00000465043 NBPF26B4DH59 902 aa8.41□□□□□ -1.06
SCN3A-206ENST00000465043 TSKSQ9UJT2 592 aa8.4□□□□□ -1.06
SCN3A-206ENST00000465043 IFFO2Q5TF58 517 aa8.39□□□□□ -1.07
SCN3A-206ENST00000465043 LRCH3Q96II8 777 aa8.39□□□□□ -1.07
SCN3A-206ENST00000465043 SEPT9Q9UHD8 586 aaPredicted RBP8.39□□□□□ -1.07
SCN3A-206ENST00000465043 PRIM1P49642 420 aaKnown RBP8.38□□□□□ -1.07
SCN3A-206ENST00000465043 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.37□□□□□ -1.07
SCN3A-206ENST00000465043 HDGFP51858 240 aaKnown RBP8.36□□□□□ -1.07
SCN3A-206ENST00000465043 BCAMP50895 628 aa8.35□□□□□ -1.07
SCN3A-206ENST00000465043 HAP1P54257 671 aaPredicted RBP8.35□□□□□ -1.07
SCN3A-206ENST00000465043 SMYD5Q6GMV2 418 aa8.35□□□□□ -1.07
SCN3A-206ENST00000465043 TATDN2Q93075 761 aa8.35□□□□□ -1.07
SCN3A-206ENST00000465043 CDHR5Q9HBB8 845 aa8.35□□□□□ -1.07
SCN3A-206ENST00000465043 TSR3Q9UJK0 312 aaKnown RBP8.35□□□□□ -1.07
SCN3A-206ENST00000465043 MLLT3P42568 568 aaPredicted RBP8.34□□□□□ -1.07
SCN3A-206ENST00000465043 TTC13Q8NBP0 860 aa8.34□□□□□ -1.07
SCN3A-206ENST00000465043 NECTIN2Q92692 538 aa8.34□□□□□ -1.07
SCN3A-206ENST00000465043 PNMA3Q9UL41 463 aa8.34□□□□□ -1.07
SCN3A-206ENST00000465043 SLC4A3P48751 1232 aa8.33□□□□□ -1.08
SCN3A-206ENST00000465043 NPDC1Q9NQX5 325 aaPredicted RBP8.33□□□□□ -1.08
SCN3A-206ENST00000465043 HPS5Q9UPZ3 1129 aa8.32□□□□□ -1.08
SCN3A-206ENST00000465043 RGS20O76081 388 aa8.31□□□□□ -1.08
SCN3A-206ENST00000465043 ITGBL1O95965 494 aaPredicted RBP8.31□□□□□ -1.08
SCN3A-206ENST00000465043 PADI6Q6TGC4 694 aa8.31□□□□□ -1.08
SCN3A-206ENST00000465043 WBP1LQ9NX94 342 aa8.31□□□□□ -1.08
SCN3A-206ENST00000465043 FAM198AQ9UFP1 575 aa8.31□□□□□ -1.08
SCN3A-206ENST00000465043 PPP4CP60510 307 aa8.3□□□□□ -1.08
SCN3A-206ENST00000465043 PTGDRQ13258 359 aa8.3□□□□□ -1.08
SCN3A-206ENST00000465043 NUDT18Q6ZVK8 323 aa8.3□□□□□ -1.08
SCN3A-206ENST00000465043 NUTM2FA1L443 756 aa8.29□□□□□ -1.08
SCN3A-206ENST00000465043 SMAPO00193 183 aa8.29□□□□□ -1.08
SCN3A-206ENST00000465043 FCHSD2O94868 740 aa8.29□□□□□ -1.08
SCN3A-206ENST00000465043 SAMD7Q7Z3H4 446 aa8.29□□□□□ -1.08
SCN3A-206ENST00000465043 SEMA3EO15041 775 aa8.28□□□□□ -1.08
SCN3A-206ENST00000465043 VSIG10Q8N0Z9 540 aa8.28□□□□□ -1.08
SCN3A-206ENST00000465043 TESPA1A2RU30 521 aaPredicted RBP8.27□□□□□ -1.09
SCN3A-206ENST00000465043 KCNC4Q03721 635 aa8.26□□□□□ -1.09
SCN3A-206ENST00000465043 SLF2Q8IX21 1173 aa8.26□□□□□ -1.09
SCN3A-206ENST00000465043 RBM46Q8TBY0 533 aaKnown RBP8.26□□□□□ -1.09
SCN3A-206ENST00000465043 A0A0G2JS52 829 aa8.25□□□□□ -1.09
SCN3A-206ENST00000465043 EYA1Q99502 592 aa8.25□□□□□ -1.09
SCN3A-206ENST00000465043 C3orf80F5H4A9 247 aa8.23□□□□□ -1.09
SCN3A-206ENST00000465043 PRR14Q9BWN1 585 aa8.23□□□□□ -1.09
SCN3A-206ENST00000465043 TULP1O00294 542 aaPredicted RBP8.22□□□□□ -1.09
SCN3A-206ENST00000465043 RNF40O75150 1001 aa8.22□□□□□ -1.09
SCN3A-206ENST00000465043 DNAJB2P25686 324 aa8.22□□□□□ -1.09
SCN3A-206ENST00000465043 HIC1Q14526 733 aa8.22□□□□□ -1.09
SCN3A-206ENST00000465043 OATP04181 439 aa8.21□□□□□ -1.1
SCN3A-206ENST00000465043 SWT1Q5T5J6 900 aaKnown RBP8.21□□□□□ -1.1
SCN3A-206ENST00000465043 KDM2AQ9Y2K7 1162 aa8.21□□□□□ -1.1
SCN3A-206ENST00000465043 ADGRG1Q9Y653 693 aa8.21□□□□□ -1.1
SCN3A-206ENST00000465043 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.18□□□□□ -1.1
SCN3A-206ENST00000465043 TMEM134Q9H6X4 195 aa8.18□□□□□ -1.1
SCN3A-206ENST00000465043 IL21Q9HBE4 155 aa8.18□□□□□ -1.1
SCN3A-206ENST00000465043 TJAP1Q5JTD0 557 aa8.17□□□□□ -1.1
SCN3A-206ENST00000465043 RBM26Q5T8P6 1007 aaKnown RBP8.17□□□□□ -1.1
SCN3A-206ENST00000465043 GNPATO15228 680 aa8.16□□□□□ -1.1
SCN3A-206ENST00000465043 RSPH4AQ5TD94 716 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms