RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 FBXW7Q969H0 707 aa12.11□□□□□ -0.47
NUP188-202ENST00000464729 KCNH8Q96L42 1107 aa12.1□□□□□ -0.47
NUP188-202ENST00000464729 EPAS1Q99814 870 aa12.1□□□□□ -0.47
NUP188-202ENST00000464729 TK2O00142 265 aa12.09□□□□□ -0.47
NUP188-202ENST00000464729 PTPREP23469 700 aa12.09□□□□□ -0.47
NUP188-202ENST00000464729 DDX12PQ92771 950 aa12.09□□□□□ -0.47
NUP188-202ENST00000464729 ADGRD1Q6QNK2 874 aa12.08□□□□□ -0.48
NUP188-202ENST00000464729 ARHGEF1Q92888 912 aaKnown RBP12.08□□□□□ -0.48
NUP188-202ENST00000464729 CC2D2AQ9P2K1 1620 aa12.08□□□□□ -0.48
NUP188-202ENST00000464729 P3H3Q8IVL6 736 aa12.05□□□□□ -0.48
NUP188-202ENST00000464729 SHROOM4Q9ULL8 1493 aa12.04□□□□□ -0.48
NUP188-202ENST00000464729 MYT1LQ9UL68 1186 aa12.04□□□□□ -0.48
NUP188-202ENST00000464729 NBR1Q14596 966 aa12.03□□□□□ -0.48
NUP188-202ENST00000464729 SLC4A5Q9BY07 1137 aa12.03□□□□□ -0.48
NUP188-202ENST00000464729 HRO43593 1189 aa12.02□□□□□ -0.49
NUP188-202ENST00000464729 ZBED2Q9BTP6 218 aa12.02□□□□□ -0.49
NUP188-202ENST00000464729 VPS9D1Q9Y2B5 631 aa12.02□□□□□ -0.49
NUP188-202ENST00000464729 PPP1R3GB7ZBB8 358 aa12.01□□□□□ -0.49
NUP188-202ENST00000464729 KDM2AQ9Y2K7 1162 aa12.01□□□□□ -0.49
NUP188-202ENST00000464729 EN1Q05925 392 aaPredicted RBP12□□□□□ -0.49
NUP188-202ENST00000464729 C6orf132Q5T0Z8 1188 aa12□□□□□ -0.49
NUP188-202ENST00000464729 RNF166Q96A37 237 aaPredicted RBP12□□□□□ -0.49
NUP188-202ENST00000464729 GRXCR2A6NFK2 248 aa11.99□□□□□ -0.49
NUP188-202ENST00000464729 COL9A1P20849 921 aa11.99□□□□□ -0.49
NUP188-202ENST00000464729 RBM33Q96EV2 1170 aaKnown RBP11.99□□□□□ -0.49
NUP188-202ENST00000464729 PRIM1P49642 420 aaKnown RBP11.97□□□□□ -0.49
NUP188-202ENST00000464729 EIF4G1Q04637 1599 aaKnown RBP11.96□□□□□ -0.49
NUP188-202ENST00000464729 OSBPP22059 807 aa11.96□□□□□ -0.49
NUP188-202ENST00000464729 MAP3K7O43318 606 aa11.95□□□□□ -0.5
NUP188-202ENST00000464729 VSIG10Q8N0Z9 540 aa11.95□□□□□ -0.5
NUP188-202ENST00000464729 TSR1Q2NL82 804 aaKnown RBP11.94□□□□□ -0.5
NUP188-202ENST00000464729 BHMG1C9JSJ3 638 aaPredicted RBP11.93□□□□□ -0.5
NUP188-202ENST00000464729 MLLT3P42568 568 aaPredicted RBP11.92□□□□□ -0.5
NUP188-202ENST00000464729 PROX2Q3B8N5 592 aa11.92□□□□□ -0.5
NUP188-202ENST00000464729 RABGEF1Q9UJ41 708 aa11.89□□□□□ -0.51
NUP188-202ENST00000464729 DCAF1Q9Y4B6 1507 aa11.89□□□□□ -0.51
NUP188-202ENST00000464729 STAC3Q96MF2 364 aa11.88□□□□□ -0.51
NUP188-202ENST00000464729 SEMA3EO15041 775 aa11.87□□□□□ -0.51
NUP188-202ENST00000464729 ONECUT3O60422 494 aaPredicted RBP11.87□□□□□ -0.51
NUP188-202ENST00000464729 NBPF3Q9H094 633 aa11.87□□□□□ -0.51
NUP188-202ENST00000464729 CDHR5Q9HBB8 845 aa11.87□□□□□ -0.51
NUP188-202ENST00000464729 TRIM6-TRIM34B2RNG4 842 aa11.86□□□□□ -0.51
NUP188-202ENST00000464729 SCRIBQ14160 1630 aa11.86□□□□□ -0.51
NUP188-202ENST00000464729 CERKQ8TCT0 537 aa11.85□□□□□ -0.51
NUP188-202ENST00000464729 MRPL50Q8N5N7 158 aaKnown RBP11.84□□□□□ -0.51
NUP188-202ENST00000464729 ZCCHC6Q5VYS8 1495 aaKnown RBP11.83□□□□□ -0.52
NUP188-202ENST00000464729 KIAA1468Q9P260 1216 aa11.83□□□□□ -0.52
NUP188-202ENST00000464729 TSKSQ9UJT2 592 aa11.82□□□□□ -0.52
NUP188-202ENST00000464729 TESPA1A2RU30 521 aaPredicted RBP11.81□□□□□ -0.52
NUP188-202ENST00000464729 PRSS12P56730 875 aa11.81□□□□□ -0.52
NUP188-202ENST00000464729 KCTD12Q96CX2 325 aaKnown RBP11.81□□□□□ -0.52
NUP188-202ENST00000464729 CDCA7LQ96GN5 454 aa11.8□□□□□ -0.52
NUP188-202ENST00000464729 NPDC1Q9NQX5 325 aaPredicted RBP11.8□□□□□ -0.52
NUP188-202ENST00000464729 LAPTM4BQ86VI4 370 aa11.79□□□□□ -0.52
NUP188-202ENST00000464729 RBM27Q9P2N5 1060 aaKnown RBP11.79□□□□□ -0.52
NUP188-202ENST00000464729 FAM198AQ9UFP1 575 aa11.78□□□□□ -0.52
NUP188-202ENST00000464729 PACS2Q86VP3 889 aa11.77□□□□□ -0.53
NUP188-202ENST00000464729 HCSTQ9UBK5 93 aa11.77□□□□□ -0.53
NUP188-202ENST00000464729 GOLGA8CPA6NN73 597 aa11.76□□□□□ -0.53
NUP188-202ENST00000464729 SEPT9Q9UHD8 586 aaPredicted RBP11.76□□□□□ -0.53
NUP188-202ENST00000464729 WNT2BQ93097 391 aa11.75□□□□□ -0.53
NUP188-202ENST00000464729 THSD4Q6ZMP0 1018 aa11.74□□□□□ -0.53
NUP188-202ENST00000464729 TTC13Q8NBP0 860 aa11.74□□□□□ -0.53
NUP188-202ENST00000464729 PTGDRQ13258 359 aa11.73□□□□□ -0.53
NUP188-202ENST00000464729 FAM98CQ17RN3 349 aaKnown RBP11.73□□□□□ -0.53
NUP188-202ENST00000464729 CUX2O14529 1486 aa11.72□□□□□ -0.53
NUP188-202ENST00000464729 SMYD5Q6GMV2 418 aa11.72□□□□□ -0.53
NUP188-202ENST00000464729 ZFRQ96KR1 1074 aaKnown RBP11.72□□□□□ -0.53
NUP188-202ENST00000464729 C3orf80F5H4A9 247 aa11.71□□□□□ -0.53
NUP188-202ENST00000464729 PADI6Q6TGC4 694 aa11.71□□□□□ -0.53
NUP188-202ENST00000464729 ANKK1Q8NFD2 765 aa11.71□□□□□ -0.53
NUP188-202ENST00000464729 NUTM2FA1L443 756 aa11.7□□□□□ -0.54
NUP188-202ENST00000464729 NBPF26B4DH59 902 aa11.7□□□□□ -0.54
NUP188-202ENST00000464729 RBM26Q5T8P6 1007 aaKnown RBP11.69□□□□□ -0.54
NUP188-202ENST00000464729 TATDN2Q93075 761 aa11.69□□□□□ -0.54
NUP188-202ENST00000464729 SMAPO00193 183 aa11.67□□□□□ -0.54
NUP188-202ENST00000464729 PTPN5P54829 565 aa11.67□□□□□ -0.54
NUP188-202ENST00000464729 PNMA3Q9UL41 463 aa11.67□□□□□ -0.54
NUP188-202ENST00000464729 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
NUP188-202ENST00000464729 FCHSD2O94868 740 aa11.65□□□□□ -0.54
NUP188-202ENST00000464729 BCAMP50895 628 aa11.65□□□□□ -0.54
NUP188-202ENST00000464729 NUDT18Q6ZVK8 323 aa11.65□□□□□ -0.54
NUP188-202ENST00000464729 ERCC6Q03468 1493 aa11.63□□□□□ -0.55
NUP188-202ENST00000464729 GPR37O15354 613 aa11.62□□□□□ -0.55
NUP188-202ENST00000464729 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.62□□□□□ -0.55
NUP188-202ENST00000464729 LRCH3Q96II8 777 aa11.61□□□□□ -0.55
NUP188-202ENST00000464729 HIC1Q14526 733 aa11.6□□□□□ -0.55
NUP188-202ENST00000464729 EYA1Q99502 592 aa11.6□□□□□ -0.55
NUP188-202ENST00000464729 SAMD7Q7Z3H4 446 aa11.59□□□□□ -0.55
NUP188-202ENST00000464729 ADGRG1Q9Y653 693 aa11.58□□□□□ -0.56
NUP188-202ENST00000464729 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
NUP188-202ENST00000464729 WBP1LQ9NX94 342 aa11.57□□□□□ -0.56
NUP188-202ENST00000464729 GPIHBP1Q8IV16 184 aa11.56□□□□□ -0.56
NUP188-202ENST00000464729 TSR3Q9UJK0 312 aaKnown RBP11.56□□□□□ -0.56
NUP188-202ENST00000464729 HPS5Q9UPZ3 1129 aa11.56□□□□□ -0.56
NUP188-202ENST00000464729 TULP1O00294 542 aaPredicted RBP11.55□□□□□ -0.56
NUP188-202ENST00000464729 GNPATO15228 680 aa11.55□□□□□ -0.56
NUP188-202ENST00000464729 NYAP1Q6ZVC0 841 aa11.55□□□□□ -0.56
NUP188-202ENST00000464729 PLA2G2EQ9NZK7 142 aa11.55□□□□□ -0.56
NUP188-202ENST00000464729 RBM46Q8TBY0 533 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms