RNA–Protein interactions for RNA: ENST00000464654.1

TM9SF3-203, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 5

Gene TM9SF3, Length 658 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-203ENST00000464654 DMRTA1Q5VZB9 504 aa9.58□□□□□ -0.88
TM9SF3-203ENST00000464654 ADGRD1Q6QNK2 874 aa9.58□□□□□ -0.88
TM9SF3-203ENST00000464654 DDX12PQ92771 950 aa9.57□□□□□ -0.88
TM9SF3-203ENST00000464654 PPP1R3GB7ZBB8 358 aa9.55□□□□□ -0.88
TM9SF3-203ENST00000464654 VSIG10Q8N0Z9 540 aa9.55□□□□□ -0.88
TM9SF3-203ENST00000464654 HRO43593 1189 aa9.54□□□□□ -0.88
TM9SF3-203ENST00000464654 VPS9D1Q9Y2B5 631 aa9.54□□□□□ -0.88
TM9SF3-203ENST00000464654 EN1Q05925 392 aaPredicted RBP9.53□□□□□ -0.88
TM9SF3-203ENST00000464654 NBR1Q14596 966 aa9.53□□□□□ -0.88
TM9SF3-203ENST00000464654 C6orf132Q5T0Z8 1188 aa9.53□□□□□ -0.88
TM9SF3-203ENST00000464654 ZBED2Q9BTP6 218 aa9.53□□□□□ -0.88
TM9SF3-203ENST00000464654 KDM2AQ9Y2K7 1162 aa9.51□□□□□ -0.89
TM9SF3-203ENST00000464654 GRXCR2A6NFK2 248 aa9.49□□□□□ -0.89
TM9SF3-203ENST00000464654 ONECUT3O60422 494 aaPredicted RBP9.49□□□□□ -0.89
TM9SF3-203ENST00000464654 OSBPP22059 807 aa9.49□□□□□ -0.89
TM9SF3-203ENST00000464654 MAP3K7O43318 606 aa9.48□□□□□ -0.89
TM9SF3-203ENST00000464654 COL9A1P20849 921 aa9.48□□□□□ -0.89
TM9SF3-203ENST00000464654 RBM33Q96EV2 1170 aaKnown RBP9.48□□□□□ -0.89
TM9SF3-203ENST00000464654 BHMG1C9JSJ3 638 aaPredicted RBP9.47□□□□□ -0.89
TM9SF3-203ENST00000464654 CERKQ8TCT0 537 aa9.47□□□□□ -0.89
TM9SF3-203ENST00000464654 RABGEF1Q9UJ41 708 aa9.46□□□□□ -0.9
TM9SF3-203ENST00000464654 STAC3Q96MF2 364 aa9.45□□□□□ -0.9
TM9SF3-203ENST00000464654 NBPF3Q9H094 633 aa9.45□□□□□ -0.9
TM9SF3-203ENST00000464654 PRIM1P49642 420 aaKnown RBP9.44□□□□□ -0.9
TM9SF3-203ENST00000464654 TSR1Q2NL82 804 aaKnown RBP9.44□□□□□ -0.9
TM9SF3-203ENST00000464654 MLLT3P42568 568 aaPredicted RBP9.42□□□□□ -0.9
TM9SF3-203ENST00000464654 PROX2Q3B8N5 592 aa9.42□□□□□ -0.9
TM9SF3-203ENST00000464654 TRIM6-TRIM34B2RNG4 842 aa9.41□□□□□ -0.9
TM9SF3-203ENST00000464654 RBM27Q9P2N5 1060 aaKnown RBP9.41□□□□□ -0.9
TM9SF3-203ENST00000464654 SEMA3EO15041 775 aa9.4□□□□□ -0.9
TM9SF3-203ENST00000464654 LAPTM4BQ86VI4 370 aa9.4□□□□□ -0.9
TM9SF3-203ENST00000464654 MRPL50Q8N5N7 158 aaKnown RBP9.4□□□□□ -0.9
TM9SF3-203ENST00000464654 PLA2G2EQ9NZK7 142 aa9.4□□□□□ -0.9
TM9SF3-203ENST00000464654 TESPA1A2RU30 521 aaPredicted RBP9.39□□□□□ -0.91
TM9SF3-203ENST00000464654 PRSS12P56730 875 aa9.38□□□□□ -0.91
TM9SF3-203ENST00000464654 SMYD5Q6GMV2 418 aa9.38□□□□□ -0.91
TM9SF3-203ENST00000464654 KIAA1468Q9P260 1216 aa9.38□□□□□ -0.91
TM9SF3-203ENST00000464654 PACS2Q86VP3 889 aa9.37□□□□□ -0.91
TM9SF3-203ENST00000464654 CDCA7LQ96GN5 454 aa9.37□□□□□ -0.91
TM9SF3-203ENST00000464654 HCSTQ9UBK5 93 aa9.37□□□□□ -0.91
TM9SF3-203ENST00000464654 CDHR5Q9HBB8 845 aa9.36□□□□□ -0.91
TM9SF3-203ENST00000464654 NPDC1Q9NQX5 325 aaPredicted RBP9.36□□□□□ -0.91
TM9SF3-203ENST00000464654 GOLGA8CPA6NN73 597 aa9.35□□□□□ -0.91
TM9SF3-203ENST00000464654 TSKSQ9UJT2 592 aa9.35□□□□□ -0.91
TM9SF3-203ENST00000464654 TTC13Q8NBP0 860 aa9.34□□□□□ -0.91
TM9SF3-203ENST00000464654 FAM98CQ17RN3 349 aaKnown RBP9.33□□□□□ -0.92
TM9SF3-203ENST00000464654 KCTD12Q96CX2 325 aaKnown RBP9.33□□□□□ -0.92
TM9SF3-203ENST00000464654 PTGDRQ13258 359 aa9.32□□□□□ -0.92
TM9SF3-203ENST00000464654 WNT2BQ93097 391 aa9.32□□□□□ -0.92
TM9SF3-203ENST00000464654 THSD4Q6ZMP0 1018 aa9.31□□□□□ -0.92
TM9SF3-203ENST00000464654 NBPF26B4DH59 902 aa9.3□□□□□ -0.92
TM9SF3-203ENST00000464654 ANKK1Q8NFD2 765 aa9.3□□□□□ -0.92
TM9SF3-203ENST00000464654 ZFRQ96KR1 1074 aaKnown RBP9.3□□□□□ -0.92
TM9SF3-203ENST00000464654 FAM198AQ9UFP1 575 aa9.3□□□□□ -0.92
TM9SF3-203ENST00000464654 NUTM2FA1L443 756 aa9.28□□□□□ -0.92
TM9SF3-203ENST00000464654 FCHSD2O94868 740 aa9.28□□□□□ -0.92
TM9SF3-203ENST00000464654 TATDN2Q93075 761 aa9.28□□□□□ -0.92
TM9SF3-203ENST00000464654 SEPT9Q9UHD8 586 aaPredicted RBP9.28□□□□□ -0.92
TM9SF3-203ENST00000464654 SOWAHBA6NEL2 793 aa9.27□□□□□ -0.93
TM9SF3-203ENST00000464654 PADI6Q6TGC4 694 aa9.27□□□□□ -0.93
TM9SF3-203ENST00000464654 TULP1O00294 542 aaPredicted RBP9.25□□□□□ -0.93
TM9SF3-203ENST00000464654 RBM26Q5T8P6 1007 aaKnown RBP9.25□□□□□ -0.93
TM9SF3-203ENST00000464654 PNMA3Q9UL41 463 aa9.25□□□□□ -0.93
TM9SF3-203ENST00000464654 HIC1Q14526 733 aa9.24□□□□□ -0.93
TM9SF3-203ENST00000464654 NYAP1Q6ZVC0 841 aa9.24□□□□□ -0.93
TM9SF3-203ENST00000464654 NUDT18Q6ZVK8 323 aa9.24□□□□□ -0.93
TM9SF3-203ENST00000464654 C3orf80F5H4A9 247 aa9.23□□□□□ -0.93
TM9SF3-203ENST00000464654 LRCH3Q96II8 777 aa9.23□□□□□ -0.93
TM9SF3-203ENST00000464654 PTPN5P54829 565 aa9.22□□□□□ -0.93
TM9SF3-203ENST00000464654 EYA1Q99502 592 aa9.22□□□□□ -0.93
TM9SF3-203ENST00000464654 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.22□□□□□ -0.93
TM9SF3-203ENST00000464654 SMAPO00193 183 aa9.21□□□□□ -0.94
TM9SF3-203ENST00000464654 GPR37O15354 613 aa9.2□□□□□ -0.94
TM9SF3-203ENST00000464654 BCAMP50895 628 aa9.2□□□□□ -0.94
TM9SF3-203ENST00000464654 ADGRG1Q9Y653 693 aa9.2□□□□□ -0.94
TM9SF3-203ENST00000464654 HDGFP51858 240 aaKnown RBP9.19□□□□□ -0.94
TM9SF3-203ENST00000464654 RBM46Q8TBY0 533 aaKnown RBP9.19□□□□□ -0.94
TM9SF3-203ENST00000464654 TSR3Q9UJK0 312 aaKnown RBP9.19□□□□□ -0.94
TM9SF3-203ENST00000464654 GNPATO15228 680 aa9.18□□□□□ -0.94
TM9SF3-203ENST00000464654 SAMD7Q7Z3H4 446 aa9.18□□□□□ -0.94
TM9SF3-203ENST00000464654 GPIHBP1Q8IV16 184 aa9.18□□□□□ -0.94
TM9SF3-203ENST00000464654 NECTIN2Q92692 538 aa9.17□□□□□ -0.94
TM9SF3-203ENST00000464654 OATP04181 439 aa9.16□□□□□ -0.94
TM9SF3-203ENST00000464654 IFFO2Q5TF58 517 aa9.16□□□□□ -0.94
TM9SF3-203ENST00000464654 IRX2Q9BZI1 471 aaPredicted RBP9.16□□□□□ -0.94
TM9SF3-203ENST00000464654 WBP1LQ9NX94 342 aa9.16□□□□□ -0.94
TM9SF3-203ENST00000464654 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
TM9SF3-203ENST00000464654 DNAJB2P25686 324 aa9.15□□□□□ -0.94
TM9SF3-203ENST00000464654 SLC4A3P48751 1232 aa9.14□□□□□ -0.95
TM9SF3-203ENST00000464654 PPP4CP60510 307 aa9.14□□□□□ -0.95
TM9SF3-203ENST00000464654 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.13□□□□□ -0.95
TM9SF3-203ENST00000464654 SLF2Q8IX21 1173 aa9.13□□□□□ -0.95
TM9SF3-203ENST00000464654 TMEM134Q9H6X4 195 aa9.13□□□□□ -0.95
TM9SF3-203ENST00000464654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.12□□□□□ -0.95
TM9SF3-203ENST00000464654 SWT1Q5T5J6 900 aaKnown RBP9.12□□□□□ -0.95
TM9SF3-203ENST00000464654 PXYLP1Q8TE99 480 aa9.12□□□□□ -0.95
TM9SF3-203ENST00000464654 ITGBL1O95965 494 aaPredicted RBP9.11□□□□□ -0.95
TM9SF3-203ENST00000464654 FECHP22830 423 aa9.11□□□□□ -0.95
TM9SF3-203ENST00000464654 METTL3Q86U44 580 aaKnown RBP9.11□□□□□ -0.95
TM9SF3-203ENST00000464654 RCCD1A6NED2 376 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms