RNA–Protein interactions for RNA: ENST00000464608.5

LRRFIP1-206, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 3

Gene LRRFIP1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-206ENST00000464608 NBR1Q14596 966 aa11.3□□□□□ -0.6
LRRFIP1-206ENST00000464608 GRXCR2A6NFK2 248 aa11.29□□□□□ -0.6
LRRFIP1-206ENST00000464608 MMRN1Q13201 1228 aa11.29□□□□□ -0.6
LRRFIP1-206ENST00000464608 ADGRD1Q6QNK2 874 aa11.28□□□□□ -0.6
LRRFIP1-206ENST00000464608 RBM33Q96EV2 1170 aaKnown RBP11.28□□□□□ -0.6
LRRFIP1-206ENST00000464608 TK2O00142 265 aa11.26□□□□□ -0.61
LRRFIP1-206ENST00000464608 EN1Q05925 392 aaPredicted RBP11.26□□□□□ -0.61
LRRFIP1-206ENST00000464608 PRIM1P49642 420 aaKnown RBP11.25□□□□□ -0.61
LRRFIP1-206ENST00000464608 PPP1R3GB7ZBB8 358 aa11.24□□□□□ -0.61
LRRFIP1-206ENST00000464608 COL9A1P20849 921 aa11.24□□□□□ -0.61
LRRFIP1-206ENST00000464608 C6orf132Q5T0Z8 1188 aa11.24□□□□□ -0.61
LRRFIP1-206ENST00000464608 ZBED2Q9BTP6 218 aa11.24□□□□□ -0.61
LRRFIP1-206ENST00000464608 TULP1O00294 542 aaPredicted RBP11.23□□□□□ -0.61
LRRFIP1-206ENST00000464608 MAP3K7O43318 606 aa11.23□□□□□ -0.61
LRRFIP1-206ENST00000464608 OSBPP22059 807 aa11.23□□□□□ -0.61
LRRFIP1-206ENST00000464608 MLLT3P42568 568 aaPredicted RBP11.23□□□□□ -0.61
LRRFIP1-206ENST00000464608 HRO43593 1189 aa11.22□□□□□ -0.61
LRRFIP1-206ENST00000464608 TSR1Q2NL82 804 aaKnown RBP11.22□□□□□ -0.61
LRRFIP1-206ENST00000464608 SLC4A5Q9BY07 1137 aa11.22□□□□□ -0.61
LRRFIP1-206ENST00000464608 MYT1LQ9UL68 1186 aa11.22□□□□□ -0.61
LRRFIP1-206ENST00000464608 VPS9D1Q9Y2B5 631 aa11.22□□□□□ -0.61
LRRFIP1-206ENST00000464608 SMYD5Q6GMV2 418 aa11.21□□□□□ -0.61
LRRFIP1-206ENST00000464608 SEMA3EO15041 775 aa11.2□□□□□ -0.62
LRRFIP1-206ENST00000464608 PROX2Q3B8N5 592 aa11.17□□□□□ -0.62
LRRFIP1-206ENST00000464608 RNF166Q96A37 237 aaPredicted RBP11.17□□□□□ -0.62
LRRFIP1-206ENST00000464608 BCANQ96GW7 911 aa11.17□□□□□ -0.62
LRRFIP1-206ENST00000464608 CDHR5Q9HBB8 845 aa11.16□□□□□ -0.62
LRRFIP1-206ENST00000464608 TESPA1A2RU30 521 aaPredicted RBP11.14□□□□□ -0.63
LRRFIP1-206ENST00000464608 BHMG1C9JSJ3 638 aaPredicted RBP11.13□□□□□ -0.63
LRRFIP1-206ENST00000464608 STAC3Q96MF2 364 aa11.11□□□□□ -0.63
LRRFIP1-206ENST00000464608 RABGEF1Q9UJ41 708 aa11.11□□□□□ -0.63
LRRFIP1-206ENST00000464608 TRIM6-TRIM34B2RNG4 842 aa11.1□□□□□ -0.63
LRRFIP1-206ENST00000464608 CERKQ8TCT0 537 aa11.09□□□□□ -0.63
LRRFIP1-206ENST00000464608 NBPF3Q9H094 633 aa11.09□□□□□ -0.63
LRRFIP1-206ENST00000464608 ONECUT3O60422 494 aaPredicted RBP11.08□□□□□ -0.64
LRRFIP1-206ENST00000464608 KIAA1468Q9P260 1216 aa11.08□□□□□ -0.64
LRRFIP1-206ENST00000464608 TSKSQ9UJT2 592 aa11.08□□□□□ -0.64
LRRFIP1-206ENST00000464608 PRSS12P56730 875 aa11.07□□□□□ -0.64
LRRFIP1-206ENST00000464608 MRPL50Q8N5N7 158 aaKnown RBP11.07□□□□□ -0.64
LRRFIP1-206ENST00000464608 CDCA7LQ96GN5 454 aa11.07□□□□□ -0.64
LRRFIP1-206ENST00000464608 NPDC1Q9NQX5 325 aaPredicted RBP11.07□□□□□ -0.64
LRRFIP1-206ENST00000464608 FAM198AQ9UFP1 575 aa11.05□□□□□ -0.64
LRRFIP1-206ENST00000464608 KCTD12Q96CX2 325 aaKnown RBP11.04□□□□□ -0.64
LRRFIP1-206ENST00000464608 NUTM2FA1L443 756 aa11.03□□□□□ -0.64
LRRFIP1-206ENST00000464608 RBM26Q5T8P6 1007 aaKnown RBP11.03□□□□□ -0.64
LRRFIP1-206ENST00000464608 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
LRRFIP1-206ENST00000464608 SEPT9Q9UHD8 586 aaPredicted RBP11.03□□□□□ -0.64
LRRFIP1-206ENST00000464608 PTGDRQ13258 359 aa11.02□□□□□ -0.65
LRRFIP1-206ENST00000464608 PACS2Q86VP3 889 aa11.02□□□□□ -0.65
LRRFIP1-206ENST00000464608 GOLGA8CPA6NN73 597 aa11.01□□□□□ -0.65
LRRFIP1-206ENST00000464608 PADI6Q6TGC4 694 aa11.01□□□□□ -0.65
LRRFIP1-206ENST00000464608 LAPTM4BQ86VI4 370 aa11□□□□□ -0.65
LRRFIP1-206ENST00000464608 C3orf80F5H4A9 247 aa10.99□□□□□ -0.65
LRRFIP1-206ENST00000464608 TTC13Q8NBP0 860 aa10.99□□□□□ -0.65
LRRFIP1-206ENST00000464608 WNT2BQ93097 391 aa10.99□□□□□ -0.65
LRRFIP1-206ENST00000464608 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
LRRFIP1-206ENST00000464608 NBPF26B4DH59 902 aa10.97□□□□□ -0.65
LRRFIP1-206ENST00000464608 SMAPO00193 183 aa10.97□□□□□ -0.65
LRRFIP1-206ENST00000464608 GPIHBP1Q8IV16 184 aa10.97□□□□□ -0.65
LRRFIP1-206ENST00000464608 ZFRQ96KR1 1074 aaKnown RBP10.97□□□□□ -0.65
LRRFIP1-206ENST00000464608 FCHSD2O94868 740 aa10.96□□□□□ -0.65
LRRFIP1-206ENST00000464608 LMOD2Q6P5Q4 547 aa10.96□□□□□ -0.65
LRRFIP1-206ENST00000464608 THSD4Q6ZMP0 1018 aa10.96□□□□□ -0.65
LRRFIP1-206ENST00000464608 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.96□□□□□ -0.65
LRRFIP1-206ENST00000464608 TATDN2Q93075 761 aa10.96□□□□□ -0.65
LRRFIP1-206ENST00000464608 PNMA3Q9UL41 463 aa10.96□□□□□ -0.65
LRRFIP1-206ENST00000464608 ANKK1Q8NFD2 765 aa10.95□□□□□ -0.66
LRRFIP1-206ENST00000464608 HCSTQ9UBK5 93 aa10.95□□□□□ -0.66
LRRFIP1-206ENST00000464608 NUDT18Q6ZVK8 323 aa10.94□□□□□ -0.66
LRRFIP1-206ENST00000464608 GPR37O15354 613 aa10.93□□□□□ -0.66
LRRFIP1-206ENST00000464608 PTPN5P54829 565 aa10.92□□□□□ -0.66
LRRFIP1-206ENST00000464608 BCAMP50895 628 aa10.91□□□□□ -0.66
LRRFIP1-206ENST00000464608 SOWAHBA6NEL2 793 aa10.9□□□□□ -0.66
LRRFIP1-206ENST00000464608 HIC1Q14526 733 aa10.9□□□□□ -0.66
LRRFIP1-206ENST00000464608 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.88□□□□□ -0.67
LRRFIP1-206ENST00000464608 GNPATO15228 680 aa10.87□□□□□ -0.67
LRRFIP1-206ENST00000464608 SAMD7Q7Z3H4 446 aa10.87□□□□□ -0.67
LRRFIP1-206ENST00000464608 LRCH3Q96II8 777 aa10.87□□□□□ -0.67
LRRFIP1-206ENST00000464608 EYA1Q99502 592 aa10.87□□□□□ -0.67
LRRFIP1-206ENST00000464608 ADGRG1Q9Y653 693 aa10.87□□□□□ -0.67
LRRFIP1-206ENST00000464608 FECHP22830 423 aa10.86□□□□□ -0.67
LRRFIP1-206ENST00000464608 FAM161AQ3B820 660 aa10.86□□□□□ -0.67
LRRFIP1-206ENST00000464608 RBM46Q8TBY0 533 aaKnown RBP10.83□□□□□ -0.68
LRRFIP1-206ENST00000464608 HPS5Q9UPZ3 1129 aa10.83□□□□□ -0.68
LRRFIP1-206ENST00000464608 WBP1LQ9NX94 342 aa10.82□□□□□ -0.68
LRRFIP1-206ENST00000464608 SWT1Q5T5J6 900 aaKnown RBP10.81□□□□□ -0.68
LRRFIP1-206ENST00000464608 TSR3Q9UJK0 312 aaKnown RBP10.81□□□□□ -0.68
LRRFIP1-206ENST00000464608 ZC3H15Q8WU90 426 aaKnown RBP10.8□□□□□ -0.68
LRRFIP1-206ENST00000464608 DNAJB2P25686 324 aa10.79□□□□□ -0.68
LRRFIP1-206ENST00000464608 HDGFP51858 240 aaKnown RBP10.79□□□□□ -0.68
LRRFIP1-206ENST00000464608 PXYLP1Q8TE99 480 aa10.79□□□□□ -0.68
LRRFIP1-206ENST00000464608 RCCD1A6NED2 376 aa10.78□□□□□ -0.68
LRRFIP1-206ENST00000464608 RNF40O75150 1001 aa10.78□□□□□ -0.68
LRRFIP1-206ENST00000464608 OATP04181 439 aa10.77□□□□□ -0.69
LRRFIP1-206ENST00000464608 METTL3Q86U44 580 aaKnown RBP10.77□□□□□ -0.69
LRRFIP1-206ENST00000464608 PPP4CP60510 307 aa10.76□□□□□ -0.69
LRRFIP1-206ENST00000464608 MAP2K5Q13163 448 aa10.76□□□□□ -0.69
LRRFIP1-206ENST00000464608 NYAP1Q6ZVC0 841 aa10.76□□□□□ -0.69
LRRFIP1-206ENST00000464608 KRI1Q8N9T8 703 aaKnown RBP10.76□□□□□ -0.69
LRRFIP1-206ENST00000464608 TMEM134Q9H6X4 195 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms