RNA–Protein interactions for RNA: ENST00000464414.1

PRUNE2-209, Transcript of prune homolog 2, humanhuman

TSL 3

Gene PRUNE2, Length 659 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-209ENST00000464414 THSD4Q6ZMP0 1018 aa10.15□□□□□ -0.78
PRUNE2-209ENST00000464414 MRPL50Q8N5N7 158 aaKnown RBP10.14□□□□□ -0.79
PRUNE2-209ENST00000464414 PCDHGA10Q9Y5H3 936 aa10.14□□□□□ -0.79
PRUNE2-209ENST00000464414 GOLGA8CPA6NN73 597 aa10.12□□□□□ -0.79
PRUNE2-209ENST00000464414 WNT2BQ93097 391 aa10.12□□□□□ -0.79
PRUNE2-209ENST00000464414 NBPF3Q9H094 633 aa10.11□□□□□ -0.79
PRUNE2-209ENST00000464414 PPP1R3GB7ZBB8 358 aa10.1□□□□□ -0.79
PRUNE2-209ENST00000464414 IFFO2Q5TF58 517 aa10.1□□□□□ -0.79
PRUNE2-209ENST00000464414 FBXW7Q969H0 707 aa10.09□□□□□ -0.79
PRUNE2-209ENST00000464414 PHF14O94880 888 aa10.08□□□□□ -0.8
PRUNE2-209ENST00000464414 PRKCSHP14314 528 aaPredicted RBP10.08□□□□□ -0.8
PRUNE2-209ENST00000464414 COL9A1P20849 921 aa10.08□□□□□ -0.8
PRUNE2-209ENST00000464414 CAMK2BQ13554 666 aa10.08□□□□□ -0.8
PRUNE2-209ENST00000464414 TYW1BQ6NUM6 668 aa10.08□□□□□ -0.8
PRUNE2-209ENST00000464414 RABGEF1Q9UJ41 708 aa10.07□□□□□ -0.8
PRUNE2-209ENST00000464414 PROX2Q3B8N5 592 aa10.06□□□□□ -0.8
PRUNE2-209ENST00000464414 RGS20O76081 388 aa10.03□□□□□ -0.8
PRUNE2-209ENST00000464414 EPAS1Q99814 870 aa10.03□□□□□ -0.8
PRUNE2-209ENST00000464414 DPYSL4O14531 572 aa10.01□□□□□ -0.81
PRUNE2-209ENST00000464414 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
PRUNE2-209ENST00000464414 C6orf132Q5T0Z8 1188 aa10.01□□□□□ -0.81
PRUNE2-209ENST00000464414 LAPTM4BQ86VI4 370 aa10.01□□□□□ -0.81
PRUNE2-209ENST00000464414 ANKK1Q8NFD2 765 aa10□□□□□ -0.81
PRUNE2-209ENST00000464414 KIAA1468Q9P260 1216 aa10□□□□□ -0.81
PRUNE2-209ENST00000464414 A0A0G2JS52 829 aa9.99□□□□□ -0.81
PRUNE2-209ENST00000464414 SOWAHBA6NEL2 793 aa9.96□□□□□ -0.82
PRUNE2-209ENST00000464414 BCAMP50895 628 aa9.96□□□□□ -0.82
PRUNE2-209ENST00000464414 ZFRQ96KR1 1074 aaKnown RBP9.96□□□□□ -0.82
PRUNE2-209ENST00000464414 ITGBL1O95965 494 aaPredicted RBP9.95□□□□□ -0.82
PRUNE2-209ENST00000464414 TPRNQ4KMQ1 711 aa9.95□□□□□ -0.82
PRUNE2-209ENST00000464414 TRIM6-TRIM34B2RNG4 842 aa9.94□□□□□ -0.82
PRUNE2-209ENST00000464414 NBR1Q14596 966 aa9.94□□□□□ -0.82
PRUNE2-209ENST00000464414 DDX12PQ92771 950 aa9.94□□□□□ -0.82
PRUNE2-209ENST00000464414 RBM33Q96EV2 1170 aaKnown RBP9.94□□□□□ -0.82
PRUNE2-209ENST00000464414 NYAP1Q6ZVC0 841 aa9.92□□□□□ -0.82
PRUNE2-209ENST00000464414 SEPT9Q9UHD8 586 aaPredicted RBP9.91□□□□□ -0.82
PRUNE2-209ENST00000464414 PDIA6Q15084 440 aa9.9□□□□□ -0.82
PRUNE2-209ENST00000464414 FAM98CQ17RN3 349 aaKnown RBP9.9□□□□□ -0.82
PRUNE2-209ENST00000464414 WBP1LQ9NX94 342 aa9.9□□□□□ -0.82
PRUNE2-209ENST00000464414 EN1Q05925 392 aaPredicted RBP9.89□□□□□ -0.83
PRUNE2-209ENST00000464414 SPDYE16A6NNV3 312 aaPredicted RBP9.88□□□□□ -0.83
PRUNE2-209ENST00000464414 KCNV2Q8TDN2 545 aa9.87□□□□□ -0.83
PRUNE2-209ENST00000464414 IRX2Q9BZI1 471 aaPredicted RBP9.87□□□□□ -0.83
PRUNE2-209ENST00000464414 WDR70Q9NW82 654 aa9.87□□□□□ -0.83
PRUNE2-209ENST00000464414 TSR1Q2NL82 804 aaKnown RBP9.86□□□□□ -0.83
PRUNE2-209ENST00000464414 TSKSQ9UJT2 592 aa9.86□□□□□ -0.83
PRUNE2-209ENST00000464414 MAP3K7O43318 606 aa9.85□□□□□ -0.83
PRUNE2-209ENST00000464414 PACS2Q86VP3 889 aa9.85□□□□□ -0.83
PRUNE2-209ENST00000464414 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.85□□□□□ -0.83
PRUNE2-209ENST00000464414 TSR3Q9UJK0 312 aaKnown RBP9.85□□□□□ -0.83
PRUNE2-209ENST00000464414 P3H3Q8IVL6 736 aa9.84□□□□□ -0.83
PRUNE2-209ENST00000464414 LRCH3Q96II8 777 aa9.84□□□□□ -0.83
PRUNE2-209ENST00000464414 ARIH1Q9Y4X5 557 aaPredicted RBP9.84□□□□□ -0.83
PRUNE2-209ENST00000464414 KCNC4Q03721 635 aa9.83□□□□□ -0.84
PRUNE2-209ENST00000464414 HPS5Q9UPZ3 1129 aa9.83□□□□□ -0.84
PRUNE2-209ENST00000464414 E2F4Q16254 413 aa9.82□□□□□ -0.84
PRUNE2-209ENST00000464414 PRIM1P49642 420 aaKnown RBP9.8□□□□□ -0.84
PRUNE2-209ENST00000464414 PRSS12P56730 875 aa9.8□□□□□ -0.84
PRUNE2-209ENST00000464414 CDCA7LQ96GN5 454 aa9.8□□□□□ -0.84
PRUNE2-209ENST00000464414 CERKQ8TCT0 537 aa9.79□□□□□ -0.84
PRUNE2-209ENST00000464414 FAM198AQ9UFP1 575 aa9.79□□□□□ -0.84
PRUNE2-209ENST00000464414 GRXCR2A6NFK2 248 aa9.76□□□□□ -0.85
PRUNE2-209ENST00000464414 SMAPO00193 183 aa9.76□□□□□ -0.85
PRUNE2-209ENST00000464414 PPP4CP60510 307 aa9.76□□□□□ -0.85
PRUNE2-209ENST00000464414 ARHGEF1Q92888 912 aaKnown RBP9.76□□□□□ -0.85
PRUNE2-209ENST00000464414 C3orf80F5H4A9 247 aa9.75□□□□□ -0.85
PRUNE2-209ENST00000464414 OSBPP22059 807 aa9.75□□□□□ -0.85
PRUNE2-209ENST00000464414 SAMD7Q7Z3H4 446 aa9.75□□□□□ -0.85
PRUNE2-209ENST00000464414 TATDN2Q93075 761 aa9.74□□□□□ -0.85
PRUNE2-209ENST00000464414 TJAP1Q5JTD0 557 aa9.73□□□□□ -0.85
PRUNE2-209ENST00000464414 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.73□□□□□ -0.85
PRUNE2-209ENST00000464414 NBPF26B4DH59 902 aa9.72□□□□□ -0.85
PRUNE2-209ENST00000464414 CDHR5Q9HBB8 845 aa9.71□□□□□ -0.86
PRUNE2-209ENST00000464414 PNMA3Q9UL41 463 aa9.71□□□□□ -0.86
PRUNE2-209ENST00000464414 RBM27Q9P2N5 1060 aaKnown RBP9.7□□□□□ -0.86
PRUNE2-209ENST00000464414 NUDT18Q6ZVK8 323 aa9.68□□□□□ -0.86
PRUNE2-209ENST00000464414 TTC13Q8NBP0 860 aa9.68□□□□□ -0.86
PRUNE2-209ENST00000464414 SEMA3EO15041 775 aa9.67□□□□□ -0.86
PRUNE2-209ENST00000464414 NPDC1Q9NQX5 325 aaPredicted RBP9.67□□□□□ -0.86
PRUNE2-209ENST00000464414 TESPA1A2RU30 521 aaPredicted RBP9.66□□□□□ -0.86
PRUNE2-209ENST00000464414 LMOD2Q6P5Q4 547 aa9.66□□□□□ -0.86
PRUNE2-209ENST00000464414 MTRQ99707 1265 aa9.66□□□□□ -0.86
PRUNE2-209ENST00000464414 IL21Q9HBE4 155 aa9.66□□□□□ -0.86
PRUNE2-209ENST00000464414 HDGFP51858 240 aaKnown RBP9.65□□□□□ -0.86
PRUNE2-209ENST00000464414 Q6ZNB5 142 aa9.65□□□□□ -0.86
PRUNE2-209ENST00000464414 APLP1P51693 650 aa9.63□□□□□ -0.87
PRUNE2-209ENST00000464414 LAPTM4AQ15012 233 aa9.63□□□□□ -0.87
PRUNE2-209ENST00000464414 PADI6Q6TGC4 694 aa9.62□□□□□ -0.87
PRUNE2-209ENST00000464414 ZNF516Q92618 1163 aa9.62□□□□□ -0.87
PRUNE2-209ENST00000464414 PPP1R18Q6NYC8 613 aa9.61□□□□□ -0.87
PRUNE2-209ENST00000464414 RNF40O75150 1001 aa9.6□□□□□ -0.87
PRUNE2-209ENST00000464414 PRKD2Q9BZL6 878 aa9.6□□□□□ -0.87
PRUNE2-209ENST00000464414 SWT1Q5T5J6 900 aaKnown RBP9.59□□□□□ -0.87
PRUNE2-209ENST00000464414 NECTIN2Q92692 538 aa9.59□□□□□ -0.87
PRUNE2-209ENST00000464414 EYA1Q99502 592 aa9.59□□□□□ -0.87
PRUNE2-209ENST00000464414 GFRA3O60609 400 aa9.58□□□□□ -0.88
PRUNE2-209ENST00000464414 SLF2Q8IX21 1173 aa9.58□□□□□ -0.88
PRUNE2-209ENST00000464414 V9GY48 417 aaPredicted RBP9.58□□□□□ -0.88
PRUNE2-209ENST00000464414 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.57□□□□□ -0.88
PRUNE2-209ENST00000464414 LCE2BO14633 110 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms