RNA–Protein interactions for RNA: ENST00000464316.5

CCNL1-204, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,843 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-204ENST00000464316 PODXL2Q9NZ53 605 aa4.97□□□□□ -1.61
CCNL1-204ENST00000464316 MYOM3Q5VTT5 1437 aa4.97□□□□□ -1.61
CCNL1-204ENST00000464316 DNAJC5Q9H3Z4 198 aa4.97□□□□□ -1.61
CCNL1-204ENST00000464316 MAPK8IP3Q9UPT6 1336 aa4.97□□□□□ -1.61
CCNL1-204ENST00000464316 CARD11Q9BXL7 1154 aa4.96□□□□□ -1.61
CCNL1-204ENST00000464316 PDCL3Q9H2J4 239 aa4.96□□□□□ -1.62
CCNL1-204ENST00000464316 RIMBP3CA6NJZ7 1639 aa4.96□□□□□ -1.62
CCNL1-204ENST00000464316 RIMBP3BA6NNM3 1639 aa4.96□□□□□ -1.62
CCNL1-204ENST00000464316 RIMBP3Q9UFD9 1639 aa4.96□□□□□ -1.62
CCNL1-204ENST00000464316 TNNT2P45379 298 aaPredicted RBP4.96□□□□□ -1.62
CCNL1-204ENST00000464316 WDR43Q15061 677 aaKnown RBP eCLIP4.96□□□□□ -1.62
CCNL1-204ENST00000464316 KIAA0556O60303 1618 aa4.96□□□□□ -1.62
CCNL1-204ENST00000464316 KDM5AP29375 1690 aaKnown RBP4.96□□□□□ -1.62
CCNL1-204ENST00000464316 USP47Q96K76 1375 aa4.95□□□□□ -1.62
CCNL1-204ENST00000464316 CANXP27824 592 aaKnown RBP4.95□□□□□ -1.62
CCNL1-204ENST00000464316 DDX11L8A8MPP1 907 aa4.95□□□□□ -1.62
CCNL1-204ENST00000464316 ARXQ96QS3 562 aa4.95□□□□□ -1.62
CCNL1-204ENST00000464316 PTPN23Q9H3S7 1636 aa4.95□□□□□ -1.62
CCNL1-204ENST00000464316 FGD5Q6ZNL6 1462 aa4.95□□□□□ -1.62
CCNL1-204ENST00000464316 EFCAB5A4FU69 1503 aa4.95□□□□□ -1.62
CCNL1-204ENST00000464316 NBPF8Q3BBV2 869 aa4.95□□□□□ -1.62
CCNL1-204ENST00000464316 MTERF4Q7Z6M4 381 aaKnown RBP4.95□□□□□ -1.62
CCNL1-204ENST00000464316 SLKQ9H2G2 1235 aaPredicted RBP4.95□□□□□ -1.62
CCNL1-204ENST00000464316 FHOD3Q2V2M9 1422 aa4.94□□□□□ -1.62
CCNL1-204ENST00000464316 SENP3-EIF4A1A0A087X0R7 540 aa4.94□□□□□ -1.62
CCNL1-204ENST00000464316 EIF3AQ14152 1382 aaKnown RBP4.94□□□□□ -1.62
CCNL1-204ENST00000464316 ESPNB1AK53 854 aa4.94□□□□□ -1.62
CCNL1-204ENST00000464316 GOLGA6L22H0YM25 854 aa4.94□□□□□ -1.62
CCNL1-204ENST00000464316 AAMPQ13685 434 aa4.94□□□□□ -1.62
CCNL1-204ENST00000464316 DCAF11Q8TEB1 546 aa4.94□□□□□ -1.62
CCNL1-204ENST00000464316 LRPPRCP42704 1394 aaKnown RBP4.94□□□□□ -1.62
CCNL1-204ENST00000464316 FRMPD1Q5SYB0 1578 aa4.94□□□□□ -1.62
CCNL1-204ENST00000464316 DEPDC5O75140 1603 aa4.94□□□□□ -1.62
CCNL1-204ENST00000464316 SIGLEC1Q9BZZ2 1709 aa4.94□□□□□ -1.62
CCNL1-204ENST00000464316 PLIN1O60240 522 aa4.94□□□□□ -1.62
CCNL1-204ENST00000464316 SKOR2Q2VWA4 1001 aaPredicted RBP4.94□□□□□ -1.62
CCNL1-204ENST00000464316 CHMP5Q9NZZ3 219 aa4.94□□□□□ -1.62
CCNL1-204ENST00000464316 POGKQ9P215 609 aa4.94□□□□□ -1.62
CCNL1-204ENST00000464316 MSNP26038 577 aaKnown RBP4.93□□□□□ -1.62
CCNL1-204ENST00000464316 RRAGDQ9NQL2 400 aaPredicted RBP4.93□□□□□ -1.62
CCNL1-204ENST00000464316 DHX29Q7Z478 1369 aaKnown RBP4.93□□□□□ -1.62
CCNL1-204ENST00000464316 INSRP06213 1382 aa4.93□□□□□ -1.62
CCNL1-204ENST00000464316 GOLGA2Q08379 1002 aa4.93□□□□□ -1.62
CCNL1-204ENST00000464316 RICTORQ6R327 1708 aa4.93□□□□□ -1.62
CCNL1-204ENST00000464316 RPRD2Q5VT52 1461 aaKnown RBP4.93□□□□□ -1.62
CCNL1-204ENST00000464316 ANKRD30BQ9BXX2 1392 aa4.93□□□□□ -1.62
CCNL1-204ENST00000464316 CGNL1Q0VF96 1302 aa4.93□□□□□ -1.62
CCNL1-204ENST00000464316 NGEFQ8N5V2 710 aa4.93□□□□□ -1.62
CCNL1-204ENST00000464316 GBP4Q96PP9 640 aa4.93□□□□□ -1.62
CCNL1-204ENST00000464316 PLEKHH2Q8IVE3 1493 aa4.92□□□□□ -1.62
CCNL1-204ENST00000464316 FOXD1Q16676 465 aa4.92□□□□□ -1.62
CCNL1-204ENST00000464316 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.92□□□□□ -1.62
CCNL1-204ENST00000464316 PDS5BQ9NTI5 1447 aa4.92□□□□□ -1.62
CCNL1-204ENST00000464316 MCM4P33991 863 aa4.92□□□□□ -1.62
CCNL1-204ENST00000464316 C8orf34Q49A92 452 aa4.92□□□□□ -1.62
CCNL1-204ENST00000464316 PMFBP1Q8TBY8 1022 aa4.92□□□□□ -1.62
CCNL1-204ENST00000464316 GZF1Q9H116 711 aaPredicted RBP4.92□□□□□ -1.62
CCNL1-204ENST00000464316 MAST1Q9Y2H9 1570 aa4.92□□□□□ -1.62
CCNL1-204ENST00000464316 SPATA31E1Q6ZUB1 1445 aa4.92□□□□□ -1.62
CCNL1-204ENST00000464316 TRAK2O60296 914 aa4.92□□□□□ -1.62
CCNL1-204ENST00000464316 XRCC6P12956 609 aaKnown RBP eCLIP4.92□□□□□ -1.62
CCNL1-204ENST00000464316 HSCBQ8IWL3 235 aa4.92□□□□□ -1.62
CCNL1-204ENST00000464316 CDCA7LQ96GN5 454 aa4.91□□□□□ -1.62
CCNL1-204ENST00000464316 DISP1Q96F81 1524 aa4.91□□□□□ -1.62
CCNL1-204ENST00000464316 PTPRKQ15262 1439 aa4.91□□□□□ -1.62
CCNL1-204ENST00000464316 PCF11O94913 1555 aaKnown RBP4.91□□□□□ -1.62
CCNL1-204ENST00000464316 CENPJQ9HC77 1338 aaPredicted RBP4.91□□□□□ -1.62
CCNL1-204ENST00000464316 CALD1Q05682 793 aaKnown RBP4.91□□□□□ -1.62
CCNL1-204ENST00000464316 NEURL4Q96JN8 1562 aa4.91□□□□□ -1.62
CCNL1-204ENST00000464316 KDM2BQ8NHM5 1336 aa4.91□□□□□ -1.62
CCNL1-204ENST00000464316 GRPEL1Q9HAV7 217 aa4.91□□□□□ -1.62
CCNL1-204ENST00000464316 TERF1P54274 439 aa4.9□□□□□ -1.62
CCNL1-204ENST00000464316 ROCK1Q13464 1354 aa4.9□□□□□ -1.62
CCNL1-204ENST00000464316 SNAPC4Q5SXM2 1469 aa4.9□□□□□ -1.62
CCNL1-204ENST00000464316 ST20-MTHFSA0A0A6YYL1 179 aa4.9□□□□□ -1.63
CCNL1-204ENST00000464316 CDCA8Q53HL2 280 aa4.9□□□□□ -1.63
CCNL1-204ENST00000464316 PDE3AQ14432 1141 aa4.9□□□□□ -1.63
CCNL1-204ENST00000464316 CSPP1Q1MSJ5 1256 aa4.9□□□□□ -1.63
CCNL1-204ENST00000464316 RWDD1Q9H446 243 aaPredicted RBP4.9□□□□□ -1.63
CCNL1-204ENST00000464316 KDM2AQ9Y2K7 1162 aa4.9□□□□□ -1.63
CCNL1-204ENST00000464316 ZMYM4Q5VZL5 1548 aa4.9□□□□□ -1.63
CCNL1-204ENST00000464316 MROH2AA6NES4 1674 aa4.89□□□□□ -1.63
CCNL1-204ENST00000464316 CCDC173Q0VFZ6 552 aa4.89□□□□□ -1.63
CCNL1-204ENST00000464316 KNSTRNQ9Y448 316 aa4.89□□□□□ -1.63
CCNL1-204ENST00000464316 SYNJ2O15056 1496 aa4.89□□□□□ -1.63
CCNL1-204ENST00000464316 EHBP1L1Q8N3D4 1523 aa4.89□□□□□ -1.63
CCNL1-204ENST00000464316 FAM135AQ9P2D6 1515 aa4.89□□□□□ -1.63
CCNL1-204ENST00000464316 FSD2A1L4K1 749 aa4.89□□□□□ -1.63
CCNL1-204ENST00000464316 PKD2Q13563 968 aa4.89□□□□□ -1.63
CCNL1-204ENST00000464316 SENP3Q9H4L4 574 aaPredicted RBP4.89□□□□□ -1.63
CCNL1-204ENST00000464316 ITSN2Q9NZM3 1697 aa4.89□□□□□ -1.63
CCNL1-204ENST00000464316 ANKRD30AQ9BXX3 1397 aa4.89□□□□□ -1.63
CCNL1-204ENST00000464316 NINLQ9Y2I6 1382 aa4.89□□□□□ -1.63
CCNL1-204ENST00000464316 TMF1P82094 1093 aa4.89□□□□□ -1.63
CCNL1-204ENST00000464316 CC2D1BQ5T0F9 858 aaKnown RBP4.89□□□□□ -1.63
CCNL1-204ENST00000464316 E9PSI1 815 aa4.88□□□□□ -1.63
CCNL1-204ENST00000464316 KIAA1211Q6ZU35 1233 aa4.88□□□□□ -1.63
CCNL1-204ENST00000464316 CIZ1Q9ULV3 898 aaPredicted RBP4.88□□□□□ -1.63
CCNL1-204ENST00000464316 CDC42BPAQ5VT25 1732 aa4.88□□□□□ -1.63
CCNL1-204ENST00000464316 ZCCHC11Q5TAX3 1644 aaKnown RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms