RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-210ENST00000464313 ZDHHC16Q969W1 377 aa10.73□□□□□ -0.69
PTPN12-210ENST00000464313 JPH4Q96JJ6 628 aa10.73□□□□□ -0.69
PTPN12-210ENST00000464313 RABGEF1Q9UJ41 708 aa10.72□□□□□ -0.69
PTPN12-210ENST00000464313 SOWAHBA6NEL2 793 aa10.71□□□□□ -0.69
PTPN12-210ENST00000464313 DDX27Q96GQ7 796 aaKnown RBP10.71□□□□□ -0.69
PTPN12-210ENST00000464313 MAP3K9P80192 1104 aa10.69□□□□□ -0.7
PTPN12-210ENST00000464313 ZNF787Q6DD87 383 aa10.68□□□□□ -0.7
PTPN12-210ENST00000464313 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
PTPN12-210ENST00000464313 WBP1LQ9NX94 342 aa10.68□□□□□ -0.7
PTPN12-210ENST00000464313 PPP1R3GB7ZBB8 358 aa10.67□□□□□ -0.7
PTPN12-210ENST00000464313 NRG2O14511 850 aaPredicted RBP10.67□□□□□ -0.7
PTPN12-210ENST00000464313 MFSD10Q14728 455 aa10.66□□□□□ -0.7
PTPN12-210ENST00000464313 PROX2Q3B8N5 592 aa10.66□□□□□ -0.7
PTPN12-210ENST00000464313 LAPTM4BQ86VI4 370 aa10.66□□□□□ -0.7
PTPN12-210ENST00000464313 CADPS2Q86UW7 1296 aa10.64□□□□□ -0.71
PTPN12-210ENST00000464313 ZFRQ96KR1 1074 aaKnown RBP10.64□□□□□ -0.71
PTPN12-210ENST00000464313 PCDHGA10Q9Y5H3 936 aa10.64□□□□□ -0.71
PTPN12-210ENST00000464313 ZNF775Q96BV0 537 aaPredicted RBP10.63□□□□□ -0.71
PTPN12-210ENST00000464313 COL9A1P20849 921 aa10.62□□□□□ -0.71
PTPN12-210ENST00000464313 PRKD2Q9BZL6 878 aa10.61□□□□□ -0.71
PTPN12-210ENST00000464313 KIAA1468Q9P260 1216 aa10.58□□□□□ -0.72
PTPN12-210ENST00000464313 TYW1BQ6NUM6 668 aa10.56□□□□□ -0.72
PTPN12-210ENST00000464313 TSR3Q9UJK0 312 aaKnown RBP10.56□□□□□ -0.72
PTPN12-210ENST00000464313 PHF14O94880 888 aa10.54□□□□□ -0.72
PTPN12-210ENST00000464313 HPS5Q9UPZ3 1129 aa10.54□□□□□ -0.72
PTPN12-210ENST00000464313 V9GY48 417 aaPredicted RBP10.54□□□□□ -0.72
PTPN12-210ENST00000464313 FBXW7Q969H0 707 aa10.53□□□□□ -0.72
PTPN12-210ENST00000464313 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.53□□□□□ -0.72
PTPN12-210ENST00000464313 SEPT9Q9UHD8 586 aaPredicted RBP10.53□□□□□ -0.72
PTPN12-210ENST00000464313 ONECUT3O60422 494 aaPredicted RBP10.52□□□□□ -0.73
PTPN12-210ENST00000464313 DPYSL4O14531 572 aa10.51□□□□□ -0.73
PTPN12-210ENST00000464313 LRCH3Q96II8 777 aa10.5□□□□□ -0.73
PTPN12-210ENST00000464313 FAM98CQ17RN3 349 aaKnown RBP10.49□□□□□ -0.73
PTPN12-210ENST00000464313 C6orf132Q5T0Z8 1188 aa10.49□□□□□ -0.73
PTPN12-210ENST00000464313 RBM33Q96EV2 1170 aaKnown RBP10.49□□□□□ -0.73
PTPN12-210ENST00000464313 PDZRN3Q9UPQ7 1066 aa10.49□□□□□ -0.73
PTPN12-210ENST00000464313 SLC24A1O60721 1099 aa10.48□□□□□ -0.73
PTPN12-210ENST00000464313 CAMK2BQ13554 666 aa10.48□□□□□ -0.73
PTPN12-210ENST00000464313 TJAP1Q5JTD0 557 aa10.47□□□□□ -0.73
PTPN12-210ENST00000464313 PPP1R18Q6NYC8 613 aa10.47□□□□□ -0.73
PTPN12-210ENST00000464313 EPAS1Q99814 870 aa10.46□□□□□ -0.73
PTPN12-210ENST00000464313 DDX12PQ92771 950 aa10.45□□□□□ -0.74
PTPN12-210ENST00000464313 TRIM6-TRIM34B2RNG4 842 aa10.43□□□□□ -0.74
PTPN12-210ENST00000464313 PPP4CP60510 307 aa10.43□□□□□ -0.74
PTPN12-210ENST00000464313 PLCB2Q00722 1185 aa10.41□□□□□ -0.74
PTPN12-210ENST00000464313 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.41□□□□□ -0.74
PTPN12-210ENST00000464313 BBXQ8WY36 941 aaPredicted RBP10.4□□□□□ -0.74
PTPN12-210ENST00000464313 IL21Q9HBE4 155 aa10.39□□□□□ -0.75
PTPN12-210ENST00000464313 TSR1Q2NL82 804 aaKnown RBP10.38□□□□□ -0.75
PTPN12-210ENST00000464313 MTRQ99707 1265 aa10.38□□□□□ -0.75
PTPN12-210ENST00000464313 NBR1Q14596 966 aa10.37□□□□□ -0.75
PTPN12-210ENST00000464313 TSKSQ9UJT2 592 aa10.37□□□□□ -0.75
PTPN12-210ENST00000464313 MAP3K7O43318 606 aa10.35□□□□□ -0.75
PTPN12-210ENST00000464313 EN1Q05925 392 aaPredicted RBP10.35□□□□□ -0.75
PTPN12-210ENST00000464313 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.34□□□□□ -0.75
PTPN12-210ENST00000464313 PAXIP1Q6ZW49 1069 aaPredicted RBP10.33□□□□□ -0.76
PTPN12-210ENST00000464313 ZNF516Q92618 1163 aa10.33□□□□□ -0.76
PTPN12-210ENST00000464313 CFAP44Q96MT7 982 aa10.33□□□□□ -0.76
PTPN12-210ENST00000464313 POTECB2RU33 542 aa10.32□□□□□ -0.76
PTPN12-210ENST00000464313 SMAPO00193 183 aa10.32□□□□□ -0.76
PTPN12-210ENST00000464313 PDIA6Q15084 440 aa10.32□□□□□ -0.76
PTPN12-210ENST00000464313 PACS2Q86VP3 889 aa10.32□□□□□ -0.76
PTPN12-210ENST00000464313 PRIM1P49642 420 aaKnown RBP10.31□□□□□ -0.76
PTPN12-210ENST00000464313 MYT1Q01538 1121 aa10.3□□□□□ -0.76
PTPN12-210ENST00000464313 FAM198AQ9UFP1 575 aa10.3□□□□□ -0.76
PTPN12-210ENST00000464313 C3orf80F5H4A9 247 aa10.29□□□□□ -0.76
PTPN12-210ENST00000464313 HAP1P54257 671 aaPredicted RBP10.29□□□□□ -0.76
PTPN12-210ENST00000464313 PKDCCQ504Y2 493 aa10.29□□□□□ -0.76
PTPN12-210ENST00000464313 TREML4Q6UXN2 200 aa10.29□□□□□ -0.76
PTPN12-210ENST00000464313 SAMD7Q7Z3H4 446 aa10.29□□□□□ -0.76
PTPN12-210ENST00000464313 CDCA7LQ96GN5 454 aa10.28□□□□□ -0.76
PTPN12-210ENST00000464313 GGCXP38435 758 aa10.27□□□□□ -0.77
PTPN12-210ENST00000464313 LCE2AQ5TA79 106 aaPredicted RBP10.27□□□□□ -0.77
PTPN12-210ENST00000464313 SPDYE16A6NNV3 312 aaPredicted RBP10.26□□□□□ -0.77
PTPN12-210ENST00000464313 DGAT1O75907 488 aa10.26□□□□□ -0.77
PTPN12-210ENST00000464313 TRIM67Q6ZTA4 783 aa10.26□□□□□ -0.77
PTPN12-210ENST00000464313 NKX2-3Q8TAU0 364 aa10.26□□□□□ -0.77
PTPN12-210ENST00000464313 GRXCR2A6NFK2 248 aa10.25□□□□□ -0.77
PTPN12-210ENST00000464313 PRSS12P56730 875 aa10.25□□□□□ -0.77
PTPN12-210ENST00000464313 SPRYD3Q8NCJ5 442 aa10.25□□□□□ -0.77
PTPN12-210ENST00000464313 TMUB1Q9BVT8 246 aa10.23□□□□□ -0.77
PTPN12-210ENST00000464313 CDHR5Q9HBB8 845 aa10.23□□□□□ -0.77
PTPN12-210ENST00000464313 TATDN2Q93075 761 aa10.22□□□□□ -0.77
PTPN12-210ENST00000464313 PNMA3Q9UL41 463 aa10.22□□□□□ -0.77
PTPN12-210ENST00000464313 E2F4Q16254 413 aa10.21□□□□□ -0.77
PTPN12-210ENST00000464313 APLP1P51693 650 aa10.19□□□□□ -0.78
PTPN12-210ENST00000464313 NBPF26B4DH59 902 aa10.18□□□□□ -0.78
PTPN12-210ENST00000464313 RNF40O75150 1001 aa10.18□□□□□ -0.78
PTPN12-210ENST00000464313 SLC19A1P41440 591 aa10.18□□□□□ -0.78
PTPN12-210ENST00000464313 CERKQ8TCT0 537 aa10.18□□□□□ -0.78
PTPN12-210ENST00000464313 OSBPP22059 807 aa10.17□□□□□ -0.78
PTPN12-210ENST00000464313 NUDT18Q6ZVK8 323 aa10.17□□□□□ -0.78
PTPN12-210ENST00000464313 PRR20EP86478 221 aa10.16□□□□□ -0.78
PTPN12-210ENST00000464313 PRR20CP86479 221 aa10.16□□□□□ -0.78
PTPN12-210ENST00000464313 PRR20DP86480 221 aa10.16□□□□□ -0.78
PTPN12-210ENST00000464313 PRR20BP86481 221 aa10.16□□□□□ -0.78
PTPN12-210ENST00000464313 PRR20AP86496 221 aa10.16□□□□□ -0.78
PTPN12-210ENST00000464313 STK17AQ9UEE5 414 aa10.16□□□□□ -0.78
PTPN12-210ENST00000464313 COPS2P61201 443 aa10.15□□□□□ -0.78
PTPN12-210ENST00000464313 TSHZ2Q9NRE2 1034 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms