RNA–Protein interactions for RNA: ENST00000463717.5

GCOM1-204, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-204ENST00000463717 ZNF518AQ6AHZ1 1483 aa28.49■■■□□ 2.15
GCOM1-204ENST00000463717 SCAPERQ9BY12 1400 aa28.49■■■□□ 2.15
GCOM1-204ENST00000463717 SCAF1Q9H7N4 1312 aaKnown RBP28.47■■■□□ 2.15
GCOM1-204ENST00000463717 KIDINS220Q9ULH0 1771 aa28.47■■■□□ 2.15
GCOM1-204ENST00000463717 VWDEQ8N2E2 1590 aa28.46■■■□□ 2.15
GCOM1-204ENST00000463717 E9PCH4 1651 aa28.46■■■□□ 2.15
GCOM1-204ENST00000463717 PRDM15P57071 1507 aaPredicted RBP28.45■■■□□ 2.15
GCOM1-204ENST00000463717 SPHKAPQ2M3C7 1700 aa28.45■■■□□ 2.14
GCOM1-204ENST00000463717 ANP32CO43423 234 aa28.45■■■□□ 2.14
GCOM1-204ENST00000463717 PLA2R1Q13018 1463 aa28.44■■■□□ 2.14
GCOM1-204ENST00000463717 CD109Q6YHK3 1445 aa28.43■■■□□ 2.14
GCOM1-204ENST00000463717 CCER2I3L3R5 266 aa28.42■■■□□ 2.14
GCOM1-204ENST00000463717 WASHC2AQ641Q2 1341 aa28.42■■■□□ 2.14
GCOM1-204ENST00000463717 AFAP1Q8N556 730 aa28.42■■■□□ 2.14
GCOM1-204ENST00000463717 CNTLNQ9NXG0 1405 aa28.41■■■□□ 2.14
GCOM1-204ENST00000463717 LAMC1P11047 1609 aa28.41■■■□□ 2.14
GCOM1-204ENST00000463717 TRPM1Q7Z4N2 1603 aa28.41■■■□□ 2.14
GCOM1-204ENST00000463717 CEP152O94986 1710 aa28.41■■■□□ 2.14
GCOM1-204ENST00000463717 TRPM2O94759 1503 aa28.4■■■□□ 2.14
GCOM1-204ENST00000463717 CCDC7Q96M83 1385 aa28.4■■■□□ 2.14
GCOM1-204ENST00000463717 HECW2Q9P2P5 1572 aa28.39■■■□□ 2.14
GCOM1-204ENST00000463717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.39■■■□□ 2.14
GCOM1-204ENST00000463717 NEO1Q92859 1461 aa28.39■■■□□ 2.14
GCOM1-204ENST00000463717 POGZQ7Z3K3 1410 aa28.39■■■□□ 2.13
GCOM1-204ENST00000463717 RNF17Q9BXT8 1623 aaKnown RBP28.38■■■□□ 2.13
GCOM1-204ENST00000463717 MROH1Q8NDA8 1641 aa28.38■■■□□ 2.13
GCOM1-204ENST00000463717 KANK1Q14678 1352 aa28.37■■■□□ 2.13
GCOM1-204ENST00000463717 USP47Q96K76 1375 aa28.37■■■□□ 2.13
GCOM1-204ENST00000463717 BCORL1Q5H9F3 1711 aa28.37■■■□□ 2.13
GCOM1-204ENST00000463717 DHX29Q7Z478 1369 aaKnown RBP28.36■■■□□ 2.13
GCOM1-204ENST00000463717 MAP3K4Q9Y6R4 1608 aa28.35■■■□□ 2.13
GCOM1-204ENST00000463717 RIMBP3CA6NJZ7 1639 aa28.34■■■□□ 2.13
GCOM1-204ENST00000463717 RIMBP3BA6NNM3 1639 aa28.34■■■□□ 2.13
GCOM1-204ENST00000463717 RIMBP3Q9UFD9 1639 aa28.34■■■□□ 2.13
GCOM1-204ENST00000463717 GLI2P10070 1586 aa28.33■■■□□ 2.13
GCOM1-204ENST00000463717 MLH3Q9UHC1 1453 aa28.33■■■□□ 2.13
GCOM1-204ENST00000463717 PRAG1Q86YV5 1406 aa28.33■■■□□ 2.13
GCOM1-204ENST00000463717 A2MP01023 1474 aa28.33■■■□□ 2.13
GCOM1-204ENST00000463717 NEURL4Q96JN8 1562 aa28.32■■■□□ 2.12
GCOM1-204ENST00000463717 PTPRTO14522 1441 aa28.3■■■□□ 2.12
GCOM1-204ENST00000463717 ARID4BQ4LE39 1312 aaPredicted RBP28.3■■■□□ 2.12
GCOM1-204ENST00000463717 LMTK2Q8IWU2 1503 aa28.29■■■□□ 2.12
GCOM1-204ENST00000463717 ZNF326Q5BKZ1 582 aaKnown RBP28.28■■■□□ 2.12
GCOM1-204ENST00000463717 EFCAB6Q5THR3 1501 aa28.27■■■□□ 2.12
GCOM1-204ENST00000463717 CLTCL1P53675 1640 aa28.26■■■□□ 2.11
GCOM1-204ENST00000463717 DCAF11Q8TEB1 546 aa28.26■■■□□ 2.11
GCOM1-204ENST00000463717 ABCA6Q8N139 1617 aa28.24■■■□□ 2.11
GCOM1-204ENST00000463717 RICTORQ6R327 1708 aa28.24■■■□□ 2.11
GCOM1-204ENST00000463717 KIF7Q2M1P5 1343 aa28.24■■■□□ 2.11
GCOM1-204ENST00000463717 GPRASP1Q5JY77 1395 aa28.23■■■□□ 2.11
GCOM1-204ENST00000463717 MYT1LQ9UL68 1186 aa28.22■■■□□ 2.11
GCOM1-204ENST00000463717 GTF3C3Q9Y5Q9 886 aa28.22■■■□□ 2.11
GCOM1-204ENST00000463717 FRMPD1Q5SYB0 1578 aa28.22■■■□□ 2.11
GCOM1-204ENST00000463717 ROCK2O75116 1388 aaKnown RBP28.21■■■□□ 2.11
GCOM1-204ENST00000463717 CARD11Q9BXL7 1154 aa28.2■■■□□ 2.11
GCOM1-204ENST00000463717 PPRC1Q5VV67 1664 aaKnown RBP28.2■■■□□ 2.1
GCOM1-204ENST00000463717 MADDQ8WXG6 1647 aa28.19■■■□□ 2.1
GCOM1-204ENST00000463717 KIF1BO60333 1816 aa28.18■■■□□ 2.1
GCOM1-204ENST00000463717 C11orf95C9JLR9 678 aaPredicted RBP28.18■■■□□ 2.1
GCOM1-204ENST00000463717 KIF3BO15066 747 aa28.17■■■□□ 2.1
GCOM1-204ENST00000463717 KDM2AQ9Y2K7 1162 aa28.17■■■□□ 2.1
GCOM1-204ENST00000463717 STAC3Q96MF2 364 aa28.15■■■□□ 2.1
GCOM1-204ENST00000463717 DIP2BQ9P265 1576 aa28.14■■■□□ 2.1
GCOM1-204ENST00000463717 DIP2CQ9Y2E4 1556 aa28.14■■■□□ 2.1
GCOM1-204ENST00000463717 KIAA1210Q9ULL0 1709 aa28.14■■■□□ 2.09
GCOM1-204ENST00000463717 ZC3H13Q5T200 1668 aaKnown RBP28.11■■■□□ 2.09
GCOM1-204ENST00000463717 IFT172Q9UG01 1749 aa28.1■■■□□ 2.09
GCOM1-204ENST00000463717 IQGAP1P46940 1657 aa28.08■■■□□ 2.09
GCOM1-204ENST00000463717 RGL3Q3MIN7 710 aa28.08■■■□□ 2.09
GCOM1-204ENST00000463717 ZMYM4Q5VZL5 1548 aa28.08■■■□□ 2.09
GCOM1-204ENST00000463717 CAMSAP1Q5T5Y3 1602 aa28.05■■■□□ 2.08
GCOM1-204ENST00000463717 MYOM2P54296 1465 aa28.04■■■□□ 2.08
GCOM1-204ENST00000463717 ABCC3O15438 1527 aa28.03■■■□□ 2.08
GCOM1-204ENST00000463717 CYB5RLQ6IPT4 315 aa28.03■■■□□ 2.08
GCOM1-204ENST00000463717 MROH2AA6NES4 1674 aa28.01■■■□□ 2.07
GCOM1-204ENST00000463717 PRKRIP1Q9H875 184 aaPredicted RBP28■■■□□ 2.07
GCOM1-204ENST00000463717 COL17A1Q9UMD9 1497 aaPredicted RBP28■■■□□ 2.07
GCOM1-204ENST00000463717 ADGRB3O60242 1522 aa28■■■□□ 2.07
GCOM1-204ENST00000463717 ST20-MTHFSA0A0A6YYL1 179 aa27.99■■■□□ 2.07
GCOM1-204ENST00000463717 UGGT1Q9NYU2 1555 aa27.94■■■□□ 2.06
GCOM1-204ENST00000463717 NPATQ14207 1427 aa27.94■■■□□ 2.06
GCOM1-204ENST00000463717 REREQ9P2R6 1566 aa27.93■■■□□ 2.06
GCOM1-204ENST00000463717 NBPF1Q3BBV0 1214 aa27.91■■■□□ 2.06
GCOM1-204ENST00000463717 PPLO60437 1756 aa27.91■■■□□ 2.06
GCOM1-204ENST00000463717 TSPOAP1O95153 1857 aa27.91■■■□□ 2.06
GCOM1-204ENST00000463717 KTN1Q86UP2 1357 aaKnown RBP27.91■■■□□ 2.06
GCOM1-204ENST00000463717 PIK3C2BO00750 1634 aa27.9■■■□□ 2.06
GCOM1-204ENST00000463717 SCAF11Q99590 1463 aaKnown RBP27.89■■■□□ 2.06
GCOM1-204ENST00000463717 RAPGEF3O95398 923 aa27.89■■■□□ 2.06
GCOM1-204ENST00000463717 NRXN1Q9ULB1 1477 aa27.89■■■□□ 2.05
GCOM1-204ENST00000463717 ARHGAP31Q2M1Z3 1444 aa27.88■■■□□ 2.05
GCOM1-204ENST00000463717 SIGLEC1Q9BZZ2 1709 aa27.87■■■□□ 2.05
GCOM1-204ENST00000463717 POLR3GLQ9BT43 218 aa27.86■■■□□ 2.05
GCOM1-204ENST00000463717 KIF13AQ9H1H9 1805 aa27.86■■■□□ 2.05
GCOM1-204ENST00000463717 EIF3AQ14152 1382 aaKnown RBP27.85■■■□□ 2.05
GCOM1-204ENST00000463717 NOS1P29475 1434 aa27.84■■■□□ 2.05
GCOM1-204ENST00000463717 YEATS2Q9ULM3 1422 aa27.84■■■□□ 2.05
GCOM1-204ENST00000463717 CFAP65Q6ZU64 1925 aaKnown RBP27.84■■■□□ 2.05
GCOM1-204ENST00000463717 FAM69CQ0P6D2 419 aa27.83■■■□□ 2.05
GCOM1-204ENST00000463717 SETBP1Q9Y6X0 1596 aa27.83■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms