RNA–Protein interactions for RNA: ENST00000463709.1

TM9SF2-202, Transcript of transmembrane 9 superfamily member 2, humanhuman

TSL 3

Gene TM9SF2, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-202ENST00000463709 MAP3K9P80192 1104 aa11.19□□□□□ -0.62
TM9SF2-202ENST00000463709 ARHGEF1Q92888 912 aaKnown RBP11.19□□□□□ -0.62
TM9SF2-202ENST00000463709 DPYSL4O14531 572 aa11.18□□□□□ -0.62
TM9SF2-202ENST00000463709 ZDHHC16Q969W1 377 aa11.17□□□□□ -0.62
TM9SF2-202ENST00000463709 SEMA3EO15041 775 aa11.16□□□□□ -0.62
TM9SF2-202ENST00000463709 ZBED2Q9BTP6 218 aa11.16□□□□□ -0.62
TM9SF2-202ENST00000463709 ADAM33Q9BZ11 813 aa11.16□□□□□ -0.62
TM9SF2-202ENST00000463709 BHMG1C9JSJ3 638 aaPredicted RBP11.15□□□□□ -0.62
TM9SF2-202ENST00000463709 PRKCSHP14314 528 aaPredicted RBP11.14□□□□□ -0.63
TM9SF2-202ENST00000463709 PCDHGA10Q9Y5H3 936 aa11.1□□□□□ -0.63
TM9SF2-202ENST00000463709 PTPN5P54829 565 aa11.08□□□□□ -0.64
TM9SF2-202ENST00000463709 TPRNQ4KMQ1 711 aa11.08□□□□□ -0.64
TM9SF2-202ENST00000463709 MRPL50Q8N5N7 158 aaKnown RBP11.08□□□□□ -0.64
TM9SF2-202ENST00000463709 PPP1R3GB7ZBB8 358 aa11.07□□□□□ -0.64
TM9SF2-202ENST00000463709 MLLT3P42568 568 aaPredicted RBP11.07□□□□□ -0.64
TM9SF2-202ENST00000463709 THSD4Q6ZMP0 1018 aa11.07□□□□□ -0.64
TM9SF2-202ENST00000463709 GOLGA8CPA6NN73 597 aa11.06□□□□□ -0.64
TM9SF2-202ENST00000463709 PHF14O94880 888 aa11.06□□□□□ -0.64
TM9SF2-202ENST00000463709 FBXW7Q969H0 707 aa11.06□□□□□ -0.64
TM9SF2-202ENST00000463709 NBPF3Q9H094 633 aa11.06□□□□□ -0.64
TM9SF2-202ENST00000463709 ARIH1Q9Y4X5 557 aaPredicted RBP11.06□□□□□ -0.64
TM9SF2-202ENST00000463709 TYW1BQ6NUM6 668 aa11.05□□□□□ -0.64
TM9SF2-202ENST00000463709 WNT2BQ93097 391 aa11.05□□□□□ -0.64
TM9SF2-202ENST00000463709 TESPA1A2RU30 521 aaPredicted RBP11.04□□□□□ -0.64
TM9SF2-202ENST00000463709 COL9A1P20849 921 aa11.02□□□□□ -0.65
TM9SF2-202ENST00000463709 PDIA6Q15084 440 aa11.02□□□□□ -0.65
TM9SF2-202ENST00000463709 RABGEF1Q9UJ41 708 aa11.02□□□□□ -0.65
TM9SF2-202ENST00000463709 GRXCR2A6NFK2 248 aa11□□□□□ -0.65
TM9SF2-202ENST00000463709 PROX2Q3B8N5 592 aa11□□□□□ -0.65
TM9SF2-202ENST00000463709 LMOD2Q6P5Q4 547 aa11□□□□□ -0.65
TM9SF2-202ENST00000463709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11□□□□□ -0.65
TM9SF2-202ENST00000463709 SPDYE16A6NNV3 312 aaPredicted RBP10.98□□□□□ -0.65
TM9SF2-202ENST00000463709 DDX12PQ92771 950 aa10.98□□□□□ -0.65
TM9SF2-202ENST00000463709 EPAS1Q99814 870 aa10.98□□□□□ -0.65
TM9SF2-202ENST00000463709 RBM26Q5T8P6 1007 aaKnown RBP10.97□□□□□ -0.65
TM9SF2-202ENST00000463709 IFFO2Q5TF58 517 aa10.97□□□□□ -0.65
TM9SF2-202ENST00000463709 C6orf132Q5T0Z8 1188 aa10.95□□□□□ -0.66
TM9SF2-202ENST00000463709 LAPTM4BQ86VI4 370 aa10.94□□□□□ -0.66
TM9SF2-202ENST00000463709 TULP1O00294 542 aaPredicted RBP10.93□□□□□ -0.66
TM9SF2-202ENST00000463709 ONECUT3O60422 494 aaPredicted RBP10.93□□□□□ -0.66
TM9SF2-202ENST00000463709 ANKK1Q8NFD2 765 aa10.93□□□□□ -0.66
TM9SF2-202ENST00000463709 KIAA1468Q9P260 1216 aa10.92□□□□□ -0.66
TM9SF2-202ENST00000463709 SMYD5Q6GMV2 418 aa10.91□□□□□ -0.66
TM9SF2-202ENST00000463709 PRIM1P49642 420 aaKnown RBP10.9□□□□□ -0.66
TM9SF2-202ENST00000463709 RBM33Q96EV2 1170 aaKnown RBP10.9□□□□□ -0.66
TM9SF2-202ENST00000463709 SOWAHBA6NEL2 793 aa10.88□□□□□ -0.67
TM9SF2-202ENST00000463709 TRIM6-TRIM34B2RNG4 842 aa10.88□□□□□ -0.67
TM9SF2-202ENST00000463709 BCAMP50895 628 aa10.88□□□□□ -0.67
TM9SF2-202ENST00000463709 ZFRQ96KR1 1074 aaKnown RBP10.88□□□□□ -0.67
TM9SF2-202ENST00000463709 A0A0G2JS52 829 aa10.87□□□□□ -0.67
TM9SF2-202ENST00000463709 RGS20O76081 388 aa10.87□□□□□ -0.67
TM9SF2-202ENST00000463709 OSBPP22059 807 aa10.87□□□□□ -0.67
TM9SF2-202ENST00000463709 EN1Q05925 392 aaPredicted RBP10.87□□□□□ -0.67
TM9SF2-202ENST00000463709 SEPT9Q9UHD8 586 aaPredicted RBP10.86□□□□□ -0.67
TM9SF2-202ENST00000463709 ZC3H15Q8WU90 426 aaKnown RBP10.85□□□□□ -0.67
TM9SF2-202ENST00000463709 FAM98CQ17RN3 349 aaKnown RBP10.84□□□□□ -0.67
TM9SF2-202ENST00000463709 NUTM2FA1L443 756 aa10.83□□□□□ -0.68
TM9SF2-202ENST00000463709 MAP3K7O43318 606 aa10.83□□□□□ -0.68
TM9SF2-202ENST00000463709 ITGBL1O95965 494 aaPredicted RBP10.83□□□□□ -0.68
TM9SF2-202ENST00000463709 TSR1Q2NL82 804 aaKnown RBP10.83□□□□□ -0.68
TM9SF2-202ENST00000463709 NYAP1Q6ZVC0 841 aa10.83□□□□□ -0.68
TM9SF2-202ENST00000463709 GPIHBP1Q8IV16 184 aa10.82□□□□□ -0.68
TM9SF2-202ENST00000463709 WBP1LQ9NX94 342 aa10.81□□□□□ -0.68
TM9SF2-202ENST00000463709 TSKSQ9UJT2 592 aa10.8□□□□□ -0.68
TM9SF2-202ENST00000463709 PACS2Q86VP3 889 aa10.79□□□□□ -0.68
TM9SF2-202ENST00000463709 CDHR5Q9HBB8 845 aa10.78□□□□□ -0.68
TM9SF2-202ENST00000463709 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.78□□□□□ -0.68
TM9SF2-202ENST00000463709 LRCH3Q96II8 777 aa10.77□□□□□ -0.69
TM9SF2-202ENST00000463709 TSR3Q9UJK0 312 aaKnown RBP10.76□□□□□ -0.69
TM9SF2-202ENST00000463709 CERKQ8TCT0 537 aa10.75□□□□□ -0.69
TM9SF2-202ENST00000463709 HPS5Q9UPZ3 1129 aa10.75□□□□□ -0.69
TM9SF2-202ENST00000463709 GPR37O15354 613 aa10.74□□□□□ -0.69
TM9SF2-202ENST00000463709 PRSS12P56730 875 aa10.74□□□□□ -0.69
TM9SF2-202ENST00000463709 CDCA7LQ96GN5 454 aa10.74□□□□□ -0.69
TM9SF2-202ENST00000463709 SLC24A3Q9HC58 644 aa10.74□□□□□ -0.69
TM9SF2-202ENST00000463709 ZMYND10O75800 440 aa10.73□□□□□ -0.69
TM9SF2-202ENST00000463709 KCNC4Q03721 635 aa10.72□□□□□ -0.69
TM9SF2-202ENST00000463709 IRX2Q9BZI1 471 aaPredicted RBP10.72□□□□□ -0.69
TM9SF2-202ENST00000463709 FECHP22830 423 aa10.71□□□□□ -0.69
TM9SF2-202ENST00000463709 FAM198AQ9UFP1 575 aa10.71□□□□□ -0.69
TM9SF2-202ENST00000463709 SMAPO00193 183 aa10.69□□□□□ -0.7
TM9SF2-202ENST00000463709 BARGINQ6ZT62 677 aa10.69□□□□□ -0.7
TM9SF2-202ENST00000463709 KRI1Q8N9T8 703 aaKnown RBP10.69□□□□□ -0.7
TM9SF2-202ENST00000463709 PPP4CP60510 307 aa10.68□□□□□ -0.7
TM9SF2-202ENST00000463709 PTGDRQ13258 359 aa10.68□□□□□ -0.7
TM9SF2-202ENST00000463709 SAMD7Q7Z3H4 446 aa10.68□□□□□ -0.7
TM9SF2-202ENST00000463709 TATDN2Q93075 761 aa10.68□□□□□ -0.7
TM9SF2-202ENST00000463709 NPDC1Q9NQX5 325 aaPredicted RBP10.68□□□□□ -0.7
TM9SF2-202ENST00000463709 NBPF26B4DH59 902 aa10.67□□□□□ -0.7
TM9SF2-202ENST00000463709 FCHSD2O94868 740 aa10.67□□□□□ -0.7
TM9SF2-202ENST00000463709 C3orf80F5H4A9 247 aa10.66□□□□□ -0.7
TM9SF2-202ENST00000463709 PNMA3Q9UL41 463 aa10.66□□□□□ -0.7
TM9SF2-202ENST00000463709 RBM27Q9P2N5 1060 aaKnown RBP10.65□□□□□ -0.7
TM9SF2-202ENST00000463709 GNPATO15228 680 aa10.64□□□□□ -0.71
TM9SF2-202ENST00000463709 HIC1Q14526 733 aa10.62□□□□□ -0.71
TM9SF2-202ENST00000463709 FAM161AQ3B820 660 aa10.62□□□□□ -0.71
TM9SF2-202ENST00000463709 NUDT18Q6ZVK8 323 aa10.62□□□□□ -0.71
TM9SF2-202ENST00000463709 TJAP1Q5JTD0 557 aa10.6□□□□□ -0.71
TM9SF2-202ENST00000463709 PADI6Q6TGC4 694 aa10.6□□□□□ -0.71
TM9SF2-202ENST00000463709 TTC13Q8NBP0 860 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms