RNA–Protein interactions for RNA: ENST00000463470.1

VPS72-203, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 1 (best)

Gene VPS72, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-203ENST00000463470 TRAPPC8Q9Y2L5 1435 aa6.56□□□□□ -1.36
VPS72-203ENST00000463470 DIP2CQ9Y2E4 1556 aa6.56□□□□□ -1.36
VPS72-203ENST00000463470 LRRIQ1Q96JM4 1722 aa6.56□□□□□ -1.36
VPS72-203ENST00000463470 ABCC1P33527 1531 aa6.55□□□□□ -1.36
VPS72-203ENST00000463470 EIF4G2P78344 907 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS72-203ENST00000463470 TRIM52Q96A61 297 aa6.55□□□□□ -1.36
VPS72-203ENST00000463470 MPHOSPH9Q99550 1183 aa6.55□□□□□ -1.36
VPS72-203ENST00000463470 DAPK1P53355 1430 aa6.55□□□□□ -1.36
VPS72-203ENST00000463470 GPATCH8Q9UKJ3 1502 aaKnown RBP6.55□□□□□ -1.36
VPS72-203ENST00000463470 ITSN2Q9NZM3 1697 aa6.55□□□□□ -1.36
VPS72-203ENST00000463470 DNMT1P26358 1616 aaKnown RBP6.54□□□□□ -1.36
VPS72-203ENST00000463470 KIAA1107Q9UPP5 1409 aa6.54□□□□□ -1.36
VPS72-203ENST00000463470 HSPA2P54652 639 aa6.54□□□□□ -1.36
VPS72-203ENST00000463470 DDX10Q13206 875 aaKnown RBP6.54□□□□□ -1.36
VPS72-203ENST00000463470 ARHGAP5Q13017 1502 aa6.54□□□□□ -1.36
VPS72-203ENST00000463470 PREX2Q70Z35 1606 aa6.54□□□□□ -1.36
VPS72-203ENST00000463470 RIMS1Q86UR5 1692 aaKnown RBP6.53□□□□□ -1.36
VPS72-203ENST00000463470 NEFLP07196 543 aa6.53□□□□□ -1.36
VPS72-203ENST00000463470 RRP7BPQ9NSQ0 103 aa6.53□□□□□ -1.36
VPS72-203ENST00000463470 CFDP1Q9UEE9 299 aaPredicted RBP6.53□□□□□ -1.36
VPS72-203ENST00000463470 ANKRD30AQ9BXX3 1397 aa6.53□□□□□ -1.36
VPS72-203ENST00000463470 MYO5CQ9NQX4 1742 aa6.53□□□□□ -1.36
VPS72-203ENST00000463470 ADGRL2O95490 1459 aa6.53□□□□□ -1.36
VPS72-203ENST00000463470 ABCC5O15440 1437 aa6.52□□□□□ -1.37
VPS72-203ENST00000463470 ABCA6Q8N139 1617 aa6.52□□□□□ -1.37
VPS72-203ENST00000463470 CEBPAP49715 358 aaPredicted RBP6.52□□□□□ -1.37
VPS72-203ENST00000463470 CDC42BPBQ9Y5S2 1711 aa6.52□□□□□ -1.37
VPS72-203ENST00000463470 RPRD2Q5VT52 1461 aaKnown RBP6.52□□□□□ -1.37
VPS72-203ENST00000463470 SHANK2Q9UPX8 1470 aa6.52□□□□□ -1.37
VPS72-203ENST00000463470 HOXD11P31277 338 aaPredicted RBP6.51□□□□□ -1.37
VPS72-203ENST00000463470 MLECQ14165 292 aa6.51□□□□□ -1.37
VPS72-203ENST00000463470 ERICH6BQ5W0A0 696 aa6.51□□□□□ -1.37
VPS72-203ENST00000463470 ANKRD30BQ9BXX2 1392 aa6.51□□□□□ -1.37
VPS72-203ENST00000463470 MBD5Q9P267 1494 aa6.51□□□□□ -1.37
VPS72-203ENST00000463470 SAMD9LQ8IVG5 1584 aa6.51□□□□□ -1.37
VPS72-203ENST00000463470 KIDINS220Q9ULH0 1771 aa6.5□□□□□ -1.37
VPS72-203ENST00000463470 PLXNC1O60486 1568 aa6.5□□□□□ -1.37
VPS72-203ENST00000463470 TSPY4P0CV99 314 aa6.5□□□□□ -1.37
VPS72-203ENST00000463470 TSPY10P0CW01 314 aa6.5□□□□□ -1.37
VPS72-203ENST00000463470 CHIC2Q9UKJ5 165 aa6.5□□□□□ -1.37
VPS72-203ENST00000463470 NPATQ14207 1427 aa6.5□□□□□ -1.37
VPS72-203ENST00000463470 NCOA1Q15788 1441 aa6.5□□□□□ -1.37
VPS72-203ENST00000463470 SUPT16HQ9Y5B9 1047 aaKnown RBP6.49□□□□□ -1.37
VPS72-203ENST00000463470 PTPRTO14522 1441 aa6.49□□□□□ -1.37
VPS72-203ENST00000463470 CNTLNQ9NXG0 1405 aa6.49□□□□□ -1.37
VPS72-203ENST00000463470 ADGBQ8N7X0 1667 aa6.49□□□□□ -1.37
VPS72-203ENST00000463470 INO80Q9ULG1 1556 aaPredicted RBP6.48□□□□□ -1.37
VPS72-203ENST00000463470 CAMSAP2Q08AD1 1489 aa6.48□□□□□ -1.37
VPS72-203ENST00000463470 PLEKHH2Q8IVE3 1493 aa6.48□□□□□ -1.37
VPS72-203ENST00000463470 CDC42BPAQ5VT25 1732 aa6.48□□□□□ -1.37
VPS72-203ENST00000463470 ROCK2O75116 1388 aaKnown RBP6.48□□□□□ -1.37
VPS72-203ENST00000463470 CERKQ8TCT0 537 aa6.48□□□□□ -1.37
VPS72-203ENST00000463470 SYCP2Q9BX26 1530 aa6.48□□□□□ -1.37
VPS72-203ENST00000463470 FER1L4A9Z1Z3 1794 aa6.48□□□□□ -1.37
VPS72-203ENST00000463470 UHRF1BP1Q6BDS2 1440 aa6.48□□□□□ -1.37
VPS72-203ENST00000463470 PREX1Q8TCU6 1659 aa6.47□□□□□ -1.37
VPS72-203ENST00000463470 HSPA5P11021 654 aaKnown RBP6.47□□□□□ -1.37
VPS72-203ENST00000463470 HNRNPMP52272 730 aaKnown RBP eCLIP6.47□□□□□ -1.37
VPS72-203ENST00000463470 L3MBTL2Q969R5 705 aa6.47□□□□□ -1.37
VPS72-203ENST00000463470 DMRT2Q9Y5R5 561 aa6.47□□□□□ -1.37
VPS72-203ENST00000463470 RTEL1-TNFRSF6BF6WH68 1400 aa6.47□□□□□ -1.37
VPS72-203ENST00000463470 ANKRD50Q9ULJ7 1429 aa6.47□□□□□ -1.37
VPS72-203ENST00000463470 SPAG9O60271 1321 aaKnown RBP6.47□□□□□ -1.37
VPS72-203ENST00000463470 ZNF644Q9H582 1327 aaPredicted RBP6.47□□□□□ -1.37
VPS72-203ENST00000463470 STRCQ7RTU9 1775 aa6.46□□□□□ -1.37
VPS72-203ENST00000463470 ZMYM3Q14202 1370 aa6.46□□□□□ -1.37
VPS72-203ENST00000463470 KTN1Q86UP2 1357 aaKnown RBP6.46□□□□□ -1.37
VPS72-203ENST00000463470 ATP7AQ04656 1500 aa6.46□□□□□ -1.37
VPS72-203ENST00000463470 ARHGEF5Q12774 1597 aa6.46□□□□□ -1.38
VPS72-203ENST00000463470 LTBP4Q8N2S1 1624 aa6.46□□□□□ -1.38
VPS72-203ENST00000463470 A2MP01023 1474 aa6.46□□□□□ -1.38
VPS72-203ENST00000463470 KDM5DQ9BY66 1539 aa6.45□□□□□ -1.38
VPS72-203ENST00000463470 DHX29Q7Z478 1369 aaKnown RBP6.45□□□□□ -1.38
VPS72-203ENST00000463470 C3P01024 1663 aa6.45□□□□□ -1.38
VPS72-203ENST00000463470 CCDC7Q96M83 1385 aa6.44□□□□□ -1.38
VPS72-203ENST00000463470 HAP1P54257 671 aaPredicted RBP6.44□□□□□ -1.38
VPS72-203ENST00000463470 PLCB2Q00722 1185 aa6.44□□□□□ -1.38
VPS72-203ENST00000463470 STAC3Q96MF2 364 aa6.44□□□□□ -1.38
VPS72-203ENST00000463470 CROCC2H7BZ55 1655 aa6.44□□□□□ -1.38
VPS72-203ENST00000463470 WASHC2AQ641Q2 1341 aa6.44□□□□□ -1.38
VPS72-203ENST00000463470 SPATA31E1Q6ZUB1 1445 aa6.43□□□□□ -1.38
VPS72-203ENST00000463470 MROH2AA6NES4 1674 aa6.43□□□□□ -1.38
VPS72-203ENST00000463470 PZPP20742 1482 aa6.43□□□□□ -1.38
VPS72-203ENST00000463470 PLA2R1Q13018 1463 aa6.43□□□□□ -1.38
VPS72-203ENST00000463470 IQSEC2Q5JU85 1478 aa6.43□□□□□ -1.38
VPS72-203ENST00000463470 ZNF777Q9ULD5 760 aaPredicted RBP6.43□□□□□ -1.38
VPS72-203ENST00000463470 CCDC141Q6ZP82 1450 aa6.42□□□□□ -1.38
VPS72-203ENST00000463470 FAM135AQ9P2D6 1515 aa6.42□□□□□ -1.38
VPS72-203ENST00000463470 PKD2Q13563 968 aa6.42□□□□□ -1.38
VPS72-203ENST00000463470 NUP155O75694 1391 aa6.42□□□□□ -1.38
VPS72-203ENST00000463470 POLR1AO95602 1720 aaPredicted RBP6.42□□□□□ -1.38
VPS72-203ENST00000463470 PRKRIP1Q9H875 184 aaPredicted RBP6.41□□□□□ -1.38
VPS72-203ENST00000463470 KIF15Q9NS87 1388 aa6.41□□□□□ -1.38
VPS72-203ENST00000463470 MAST1Q9Y2H9 1570 aa6.4□□□□□ -1.38
VPS72-203ENST00000463470 CAMSAP1Q5T5Y3 1602 aa6.4□□□□□ -1.38
VPS72-203ENST00000463470 PRKCSHP14314 528 aaPredicted RBP6.4□□□□□ -1.38
VPS72-203ENST00000463470 HNRNPUQ00839 825 aaKnown RBP eCLIP6.4□□□□□ -1.38
VPS72-203ENST00000463470 HIRIP3Q9BW71 556 aaPredicted RBP6.4□□□□□ -1.38
VPS72-203ENST00000463470 ZBED9Q6R2W3 1325 aa6.4□□□□□ -1.39
VPS72-203ENST00000463470 WASHC2CQ9Y4E1 1318 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms