RNA–Protein interactions for RNA: ENST00000462376.1

LYST-204, Transcript of lysosomal trafficking regulator, humanhuman

TSL 4

Gene LYST, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-204ENST00000462376 FBXW7Q969H0 707 aa12.89□□□□□ -0.35
LYST-204ENST00000462376 ZBED2Q9BTP6 218 aa12.88□□□□□ -0.35
LYST-204ENST00000462376 SPDYE16A6NNV3 312 aaPredicted RBP12.87□□□□□ -0.35
LYST-204ENST00000462376 COL9A1P20849 921 aa12.87□□□□□ -0.35
LYST-204ENST00000462376 EPAS1Q99814 870 aa12.87□□□□□ -0.35
LYST-204ENST00000462376 C6orf132Q5T0Z8 1188 aa12.85□□□□□ -0.35
LYST-204ENST00000462376 KCTD12Q96CX2 325 aaKnown RBP12.85□□□□□ -0.35
LYST-204ENST00000462376 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
LYST-204ENST00000462376 PPP1R3GB7ZBB8 358 aa12.83□□□□□ -0.36
LYST-204ENST00000462376 MAP3K7O43318 606 aa12.83□□□□□ -0.36
LYST-204ENST00000462376 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
LYST-204ENST00000462376 TSR1Q2NL82 804 aaKnown RBP12.81□□□□□ -0.36
LYST-204ENST00000462376 GOLGA8CPA6NN73 597 aa12.8□□□□□ -0.36
LYST-204ENST00000462376 MRPL50Q8N5N7 158 aaKnown RBP12.8□□□□□ -0.36
LYST-204ENST00000462376 KCNV2Q8TDN2 545 aa12.8□□□□□ -0.36
LYST-204ENST00000462376 SLC4A5Q9BY07 1137 aa12.8□□□□□ -0.36
LYST-204ENST00000462376 ARIH1Q9Y4X5 557 aaPredicted RBP12.8□□□□□ -0.36
LYST-204ENST00000462376 EN1Q05925 392 aaPredicted RBP12.78□□□□□ -0.36
LYST-204ENST00000462376 BHMG1C9JSJ3 638 aaPredicted RBP12.76□□□□□ -0.37
LYST-204ENST00000462376 PTPN5P54829 565 aa12.76□□□□□ -0.37
LYST-204ENST00000462376 PRIM1P49642 420 aaKnown RBP12.75□□□□□ -0.37
LYST-204ENST00000462376 NBPF3Q9H094 633 aa12.75□□□□□ -0.37
LYST-204ENST00000462376 KIAA1468Q9P260 1216 aa12.75□□□□□ -0.37
LYST-204ENST00000462376 HCSTQ9UBK5 93 aa12.74□□□□□ -0.37
LYST-204ENST00000462376 ARHGEF1Q92888 912 aaKnown RBP12.73□□□□□ -0.37
LYST-204ENST00000462376 OSBPP22059 807 aa12.72□□□□□ -0.37
LYST-204ENST00000462376 RABGEF1Q9UJ41 708 aa12.72□□□□□ -0.37
LYST-204ENST00000462376 WNT2BQ93097 391 aa12.71□□□□□ -0.37
LYST-204ENST00000462376 SEPT9Q9UHD8 586 aaPredicted RBP12.71□□□□□ -0.37
LYST-204ENST00000462376 MLLT3P42568 568 aaPredicted RBP12.7□□□□□ -0.38
LYST-204ENST00000462376 TRIM6-TRIM34B2RNG4 842 aa12.68□□□□□ -0.38
LYST-204ENST00000462376 CDHR5Q9HBB8 845 aa12.68□□□□□ -0.38
LYST-204ENST00000462376 P3H3Q8IVL6 736 aa12.67□□□□□ -0.38
LYST-204ENST00000462376 TSKSQ9UJT2 592 aa12.65□□□□□ -0.38
LYST-204ENST00000462376 THSD4Q6ZMP0 1018 aa12.64□□□□□ -0.39
LYST-204ENST00000462376 CDCA7LQ96GN5 454 aa12.64□□□□□ -0.39
LYST-204ENST00000462376 SMAPO00193 183 aa12.62□□□□□ -0.39
LYST-204ENST00000462376 SEMA3EO15041 775 aa12.62□□□□□ -0.39
LYST-204ENST00000462376 PACS2Q86VP3 889 aa12.62□□□□□ -0.39
LYST-204ENST00000462376 ANKK1Q8NFD2 765 aa12.62□□□□□ -0.39
LYST-204ENST00000462376 ONECUT3O60422 494 aaPredicted RBP12.61□□□□□ -0.39
LYST-204ENST00000462376 PRSS12P56730 875 aa12.61□□□□□ -0.39
LYST-204ENST00000462376 ZFRQ96KR1 1074 aaKnown RBP12.61□□□□□ -0.39
LYST-204ENST00000462376 BCAMP50895 628 aa12.6□□□□□ -0.39
LYST-204ENST00000462376 PLA2G2EQ9NZK7 142 aa12.6□□□□□ -0.39
LYST-204ENST00000462376 KDM2AQ9Y2K7 1162 aa12.6□□□□□ -0.39
LYST-204ENST00000462376 LAPTM4BQ86VI4 370 aa12.58□□□□□ -0.4
LYST-204ENST00000462376 CERKQ8TCT0 537 aa12.58□□□□□ -0.4
LYST-204ENST00000462376 FAM198AQ9UFP1 575 aa12.58□□□□□ -0.4
LYST-204ENST00000462376 FAM98CQ17RN3 349 aaKnown RBP12.56□□□□□ -0.4
LYST-204ENST00000462376 PNMA3Q9UL41 463 aa12.56□□□□□ -0.4
LYST-204ENST00000462376 C3orf80F5H4A9 247 aa12.55□□□□□ -0.4
LYST-204ENST00000462376 NUTM2FA1L443 756 aa12.54□□□□□ -0.4
LYST-204ENST00000462376 NPDC1Q9NQX5 325 aaPredicted RBP12.54□□□□□ -0.4
LYST-204ENST00000462376 SOWAHBA6NEL2 793 aa12.53□□□□□ -0.4
LYST-204ENST00000462376 PADI6Q6TGC4 694 aa12.52□□□□□ -0.41
LYST-204ENST00000462376 NUDT18Q6ZVK8 323 aa12.52□□□□□ -0.41
LYST-204ENST00000462376 TATDN2Q93075 761 aa12.52□□□□□ -0.41
LYST-204ENST00000462376 NBPF26B4DH59 902 aa12.51□□□□□ -0.41
LYST-204ENST00000462376 LRCH3Q96II8 777 aa12.51□□□□□ -0.41
LYST-204ENST00000462376 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.51□□□□□ -0.41
LYST-204ENST00000462376 WBP1LQ9NX94 342 aa12.49□□□□□ -0.41
LYST-204ENST00000462376 HPS5Q9UPZ3 1129 aa12.48□□□□□ -0.41
LYST-204ENST00000462376 RNF40O75150 1001 aa12.47□□□□□ -0.41
LYST-204ENST00000462376 SAMD7Q7Z3H4 446 aa12.47□□□□□ -0.41
LYST-204ENST00000462376 PTGDRQ13258 359 aa12.45□□□□□ -0.42
LYST-204ENST00000462376 RBM26Q5T8P6 1007 aaKnown RBP12.45□□□□□ -0.42
LYST-204ENST00000462376 VSIG10Q8N0Z9 540 aa12.45□□□□□ -0.42
LYST-204ENST00000462376 RBM27Q9P2N5 1060 aaKnown RBP12.44□□□□□ -0.42
LYST-204ENST00000462376 TESPA1A2RU30 521 aaPredicted RBP12.43□□□□□ -0.42
LYST-204ENST00000462376 HDGFP51858 240 aaKnown RBP12.43□□□□□ -0.42
LYST-204ENST00000462376 TSR3Q9UJK0 312 aaKnown RBP12.43□□□□□ -0.42
LYST-204ENST00000462376 PPP4CP60510 307 aa12.42□□□□□ -0.42
LYST-204ENST00000462376 FAM161AQ3B820 660 aa12.41□□□□□ -0.42
LYST-204ENST00000462376 SMYD5Q6GMV2 418 aa12.41□□□□□ -0.42
LYST-204ENST00000462376 TTC13Q8NBP0 860 aa12.4□□□□□ -0.42
LYST-204ENST00000462376 FCHSD2O94868 740 aa12.38□□□□□ -0.43
LYST-204ENST00000462376 SWT1Q5T5J6 900 aaKnown RBP12.37□□□□□ -0.43
LYST-204ENST00000462376 NYAP1Q6ZVC0 841 aa12.35□□□□□ -0.43
LYST-204ENST00000462376 EYA1Q99502 592 aa12.35□□□□□ -0.43
LYST-204ENST00000462376 RBM46Q8TBY0 533 aaKnown RBP12.31□□□□□ -0.44
LYST-204ENST00000462376 ADGRG1Q9Y653 693 aa12.31□□□□□ -0.44
LYST-204ENST00000462376 FECHP22830 423 aa12.29□□□□□ -0.44
LYST-204ENST00000462376 SLF2Q8IX21 1173 aa12.29□□□□□ -0.44
LYST-204ENST00000462376 KCNC4Q03721 635 aa12.28□□□□□ -0.44
LYST-204ENST00000462376 HIC1Q14526 733 aa12.28□□□□□ -0.44
LYST-204ENST00000462376 ITGBL1O95965 494 aaPredicted RBP12.27□□□□□ -0.45
LYST-204ENST00000462376 DNAJB2P25686 324 aa12.27□□□□□ -0.45
LYST-204ENST00000462376 SLC4A3P48751 1232 aa12.27□□□□□ -0.45
LYST-204ENST00000462376 RCCD1A6NED2 376 aa12.26□□□□□ -0.45
LYST-204ENST00000462376 GPIHBP1Q8IV16 184 aa12.26□□□□□ -0.45
LYST-204ENST00000462376 GNPATO15228 680 aa12.25□□□□□ -0.45
LYST-204ENST00000462376 APLP1P51693 650 aa12.25□□□□□ -0.45
LYST-204ENST00000462376 A0A0G2JS52 829 aa12.23□□□□□ -0.45
LYST-204ENST00000462376 IFFO2Q5TF58 517 aa12.23□□□□□ -0.45
LYST-204ENST00000462376 TULP1O00294 542 aaPredicted RBP12.22□□□□□ -0.45
LYST-204ENST00000462376 MTRQ99707 1265 aa12.22□□□□□ -0.45
LYST-204ENST00000462376 GPR37O15354 613 aa12.21□□□□□ -0.45
LYST-204ENST00000462376 OATP04181 439 aa12.21□□□□□ -0.45
LYST-204ENST00000462376 COPS2P61201 443 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms