RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 KDM2AQ9Y2K7 1162 aa6.9□□□□□ -1.3
HDAC6-212ENST00000461608 KCNC4Q03721 635 aa6.89□□□□□ -1.31
HDAC6-212ENST00000461608 MFSD10Q14728 455 aa6.89□□□□□ -1.31
HDAC6-212ENST00000461608 ZDHHC16Q969W1 377 aa6.89□□□□□ -1.31
HDAC6-212ENST00000461608 ZBED2Q9BTP6 218 aa6.89□□□□□ -1.31
HDAC6-212ENST00000461608 TSHZ2Q9NRE2 1034 aa6.89□□□□□ -1.31
HDAC6-212ENST00000461608 PDE4AP27815 886 aa6.88□□□□□ -1.31
HDAC6-212ENST00000461608 FOSBP53539 338 aa6.88□□□□□ -1.31
HDAC6-212ENST00000461608 EVI5O60447 810 aa6.87□□□□□ -1.31
HDAC6-212ENST00000461608 ITGBL1O95965 494 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-212ENST00000461608 DDX27Q96GQ7 796 aaKnown RBP6.87□□□□□ -1.31
HDAC6-212ENST00000461608 JPH4Q96JJ6 628 aa6.87□□□□□ -1.31
HDAC6-212ENST00000461608 ANO8Q9HCE9 1232 aaPredicted RBP6.87□□□□□ -1.31
HDAC6-212ENST00000461608 TRAF7Q6Q0C0 670 aa6.86□□□□□ -1.31
HDAC6-212ENST00000461608 ADAM33Q9BZ11 813 aa6.86□□□□□ -1.31
HDAC6-212ENST00000461608 GFRA3O60609 400 aa6.85□□□□□ -1.31
HDAC6-212ENST00000461608 RABGEF1Q9UJ41 708 aa6.85□□□□□ -1.31
HDAC6-212ENST00000461608 LAPTM4BQ86VI4 370 aa6.84□□□□□ -1.31
HDAC6-212ENST00000461608 PPP1R3GB7ZBB8 358 aa6.83□□□□□ -1.32
HDAC6-212ENST00000461608 MAP3K9P80192 1104 aa6.83□□□□□ -1.32
HDAC6-212ENST00000461608 NBR1Q14596 966 aa6.82□□□□□ -1.32
HDAC6-212ENST00000461608 SOWAHBA6NEL2 793 aa6.81□□□□□ -1.32
HDAC6-212ENST00000461608 BCAMP50895 628 aa6.81□□□□□ -1.32
HDAC6-212ENST00000461608 PCDHGA10Q9Y5H3 936 aa6.81□□□□□ -1.32
HDAC6-212ENST00000461608 COL9A1P20849 921 aa6.8□□□□□ -1.32
HDAC6-212ENST00000461608 P3H3Q8IVL6 736 aa6.8□□□□□ -1.32
HDAC6-212ENST00000461608 CAMK2BQ13554 666 aa6.78□□□□□ -1.32
HDAC6-212ENST00000461608 PROX2Q3B8N5 592 aa6.78□□□□□ -1.32
HDAC6-212ENST00000461608 FBXW7Q969H0 707 aa6.78□□□□□ -1.32
HDAC6-212ENST00000461608 LRCH3Q96II8 777 aa6.78□□□□□ -1.32
HDAC6-212ENST00000461608 ZFRQ96KR1 1074 aaKnown RBP6.78□□□□□ -1.32
HDAC6-212ENST00000461608 NRG2O14511 850 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-212ENST00000461608 DPYSL4O14531 572 aa6.77□□□□□ -1.33
HDAC6-212ENST00000461608 ZNF787Q6DD87 383 aa6.77□□□□□ -1.33
HDAC6-212ENST00000461608 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.77□□□□□ -1.33
HDAC6-212ENST00000461608 TSR3Q9UJK0 312 aaKnown RBP6.76□□□□□ -1.33
HDAC6-212ENST00000461608 WBP1LQ9NX94 342 aa6.75□□□□□ -1.33
HDAC6-212ENST00000461608 ONECUT3O60422 494 aaPredicted RBP6.74□□□□□ -1.33
HDAC6-212ENST00000461608 TYW1BQ6NUM6 668 aa6.74□□□□□ -1.33
HDAC6-212ENST00000461608 KIAA1468Q9P260 1216 aa6.74□□□□□ -1.33
HDAC6-212ENST00000461608 HPS5Q9UPZ3 1129 aa6.74□□□□□ -1.33
HDAC6-212ENST00000461608 PPP4CP60510 307 aa6.73□□□□□ -1.33
HDAC6-212ENST00000461608 PRKD2Q9BZL6 878 aa6.73□□□□□ -1.33
HDAC6-212ENST00000461608 PHF14O94880 888 aa6.72□□□□□ -1.33
HDAC6-212ENST00000461608 FAM98CQ17RN3 349 aaKnown RBP6.72□□□□□ -1.33
HDAC6-212ENST00000461608 GGCXP38435 758 aa6.71□□□□□ -1.34
HDAC6-212ENST00000461608 PRIM1P49642 420 aaKnown RBP6.71□□□□□ -1.34
HDAC6-212ENST00000461608 DDX12PQ92771 950 aa6.71□□□□□ -1.34
HDAC6-212ENST00000461608 WDR70Q9NW82 654 aa6.71□□□□□ -1.34
HDAC6-212ENST00000461608 SEPT9Q9UHD8 586 aaPredicted RBP6.71□□□□□ -1.34
HDAC6-212ENST00000461608 HDGFP51858 240 aaKnown RBP6.7□□□□□ -1.34
HDAC6-212ENST00000461608 RBM33Q96EV2 1170 aaKnown RBP6.7□□□□□ -1.34
HDAC6-212ENST00000461608 V9GY48 417 aaPredicted RBP6.7□□□□□ -1.34
HDAC6-212ENST00000461608 TSR1Q2NL82 804 aaKnown RBP6.69□□□□□ -1.34
HDAC6-212ENST00000461608 TPRNQ4KMQ1 711 aa6.69□□□□□ -1.34
HDAC6-212ENST00000461608 C6orf132Q5T0Z8 1188 aa6.69□□□□□ -1.34
HDAC6-212ENST00000461608 PACS2Q86VP3 889 aa6.69□□□□□ -1.34
HDAC6-212ENST00000461608 EPAS1Q99814 870 aa6.68□□□□□ -1.34
HDAC6-212ENST00000461608 PDZRN3Q9UPQ7 1066 aa6.68□□□□□ -1.34
HDAC6-212ENST00000461608 TRIM6-TRIM34B2RNG4 842 aa6.67□□□□□ -1.34
HDAC6-212ENST00000461608 C3orf80F5H4A9 247 aa6.67□□□□□ -1.34
HDAC6-212ENST00000461608 NECTIN2Q92692 538 aa6.67□□□□□ -1.34
HDAC6-212ENST00000461608 PDIA6Q15084 440 aa6.66□□□□□ -1.34
HDAC6-212ENST00000461608 IL21Q9HBE4 155 aa6.66□□□□□ -1.34
HDAC6-212ENST00000461608 SLC4A3P48751 1232 aa6.64□□□□□ -1.35
HDAC6-212ENST00000461608 EN1Q05925 392 aaPredicted RBP6.64□□□□□ -1.35
HDAC6-212ENST00000461608 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.64□□□□□ -1.35
HDAC6-212ENST00000461608 FAM198AQ9UFP1 575 aa6.64□□□□□ -1.35
HDAC6-212ENST00000461608 TSKSQ9UJT2 592 aa6.64□□□□□ -1.35
HDAC6-212ENST00000461608 TULP1O00294 542 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-212ENST00000461608 RNF40O75150 1001 aa6.63□□□□□ -1.35
HDAC6-212ENST00000461608 PPP1R18Q6NYC8 613 aa6.63□□□□□ -1.35
HDAC6-212ENST00000461608 ZNF775Q96BV0 537 aaPredicted RBP6.63□□□□□ -1.35
HDAC6-212ENST00000461608 PRKCSHP14314 528 aaPredicted RBP6.62□□□□□ -1.35
HDAC6-212ENST00000461608 PKDCCQ504Y2 493 aa6.62□□□□□ -1.35
HDAC6-212ENST00000461608 CDHR5Q9HBB8 845 aa6.62□□□□□ -1.35
HDAC6-212ENST00000461608 MAP3K7O43318 606 aa6.61□□□□□ -1.35
HDAC6-212ENST00000461608 KCNV2Q8TDN2 545 aa6.61□□□□□ -1.35
HDAC6-212ENST00000461608 SMAPO00193 183 aa6.6□□□□□ -1.35
HDAC6-212ENST00000461608 E2F4Q16254 413 aa6.6□□□□□ -1.35
HDAC6-212ENST00000461608 ARHGEF1Q92888 912 aaKnown RBP6.6□□□□□ -1.35
HDAC6-212ENST00000461608 MTRQ99707 1265 aa6.6□□□□□ -1.35
HDAC6-212ENST00000461608 GRXCR2A6NFK2 248 aa6.59□□□□□ -1.35
HDAC6-212ENST00000461608 LCE2BO14633 110 aa6.58□□□□□ -1.36
HDAC6-212ENST00000461608 TJAP1Q5JTD0 557 aa6.58□□□□□ -1.36
HDAC6-212ENST00000461608 ARIH1Q9Y4X5 557 aaPredicted RBP6.58□□□□□ -1.36
HDAC6-212ENST00000461608 SPDYE16A6NNV3 312 aaPredicted RBP6.57□□□□□ -1.36
HDAC6-212ENST00000461608 OSBPP22059 807 aa6.57□□□□□ -1.36
HDAC6-212ENST00000461608 SAMD7Q7Z3H4 446 aa6.57□□□□□ -1.36
HDAC6-212ENST00000461608 NBPF26B4DH59 902 aa6.56□□□□□ -1.36
HDAC6-212ENST00000461608 CERKQ8TCT0 537 aa6.56□□□□□ -1.36
HDAC6-212ENST00000461608 CDCA7LQ96GN5 454 aa6.56□□□□□ -1.36
HDAC6-212ENST00000461608 TMUB1Q9BVT8 246 aa6.56□□□□□ -1.36
HDAC6-212ENST00000461608 PRSS12P56730 875 aa6.55□□□□□ -1.36
HDAC6-212ENST00000461608 PRR14Q9BWN1 585 aa6.54□□□□□ -1.36
HDAC6-212ENST00000461608 DGAT1O75907 488 aa6.53□□□□□ -1.36
HDAC6-212ENST00000461608 NPDC1Q9NQX5 325 aaPredicted RBP6.53□□□□□ -1.36
HDAC6-212ENST00000461608 SMYD5Q6GMV2 418 aa6.52□□□□□ -1.37
HDAC6-212ENST00000461608 TATDN2Q93075 761 aa6.52□□□□□ -1.37
HDAC6-212ENST00000461608 PNMA3Q9UL41 463 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms