RNA–Protein interactions for RNA: ENST00000461489.1

COL21A1-205, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 4

Gene COL21A1, Length 555 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-205ENST00000461489 MRPL50Q8N5N7 158 aaKnown RBP11.19□□□□□ -0.62
COL21A1-205ENST00000461489 BHMG1C9JSJ3 638 aaPredicted RBP11.18□□□□□ -0.62
COL21A1-205ENST00000461489 DDX12PQ92771 950 aa11.18□□□□□ -0.62
COL21A1-205ENST00000461489 NBPF3Q9H094 633 aa11.18□□□□□ -0.62
COL21A1-205ENST00000461489 COL9A1P20849 921 aa11.17□□□□□ -0.62
COL21A1-205ENST00000461489 E2F4Q16254 413 aa11.17□□□□□ -0.62
COL21A1-205ENST00000461489 RBM33Q96EV2 1170 aaKnown RBP11.16□□□□□ -0.62
COL21A1-205ENST00000461489 PLA2G2EQ9NZK7 142 aa11.16□□□□□ -0.62
COL21A1-205ENST00000461489 PTPN5P54829 565 aa11.15□□□□□ -0.62
COL21A1-205ENST00000461489 PDIA6Q15084 440 aa11.15□□□□□ -0.62
COL21A1-205ENST00000461489 PROX2Q3B8N5 592 aa11.15□□□□□ -0.62
COL21A1-205ENST00000461489 SPDYE16A6NNV3 312 aaPredicted RBP11.14□□□□□ -0.63
COL21A1-205ENST00000461489 C6orf132Q5T0Z8 1188 aa11.14□□□□□ -0.63
COL21A1-205ENST00000461489 WNT2BQ93097 391 aa11.13□□□□□ -0.63
COL21A1-205ENST00000461489 NBR1Q14596 966 aa11.12□□□□□ -0.63
COL21A1-205ENST00000461489 RABGEF1Q9UJ41 708 aa11.12□□□□□ -0.63
COL21A1-205ENST00000461489 THSD4Q6ZMP0 1018 aa11.11□□□□□ -0.63
COL21A1-205ENST00000461489 MAP3K7O43318 606 aa11.09□□□□□ -0.63
COL21A1-205ENST00000461489 KIAA1468Q9P260 1216 aa11.08□□□□□ -0.64
COL21A1-205ENST00000461489 EN1Q05925 392 aaPredicted RBP11.07□□□□□ -0.64
COL21A1-205ENST00000461489 ARIH1Q9Y4X5 557 aaPredicted RBP11.07□□□□□ -0.64
COL21A1-205ENST00000461489 ANKK1Q8NFD2 765 aa11.06□□□□□ -0.64
COL21A1-205ENST00000461489 GRXCR2A6NFK2 248 aa11.05□□□□□ -0.64
COL21A1-205ENST00000461489 ONECUT3O60422 494 aaPredicted RBP11.05□□□□□ -0.64
COL21A1-205ENST00000461489 TRIM6-TRIM34B2RNG4 842 aa11.04□□□□□ -0.64
COL21A1-205ENST00000461489 TSR1Q2NL82 804 aaKnown RBP11.04□□□□□ -0.64
COL21A1-205ENST00000461489 LAPTM4BQ86VI4 370 aa11.04□□□□□ -0.64
COL21A1-205ENST00000461489 TSHZ2Q9NRE2 1034 aa11.04□□□□□ -0.64
COL21A1-205ENST00000461489 SEPT9Q9UHD8 586 aaPredicted RBP11.02□□□□□ -0.65
COL21A1-205ENST00000461489 ZFRQ96KR1 1074 aaKnown RBP11□□□□□ -0.65
COL21A1-205ENST00000461489 BCAMP50895 628 aa10.99□□□□□ -0.65
COL21A1-205ENST00000461489 PACS2Q86VP3 889 aa10.98□□□□□ -0.65
COL21A1-205ENST00000461489 SOWAHBA6NEL2 793 aa10.97□□□□□ -0.65
COL21A1-205ENST00000461489 PRIM1P49642 420 aaKnown RBP10.97□□□□□ -0.65
COL21A1-205ENST00000461489 FAM98CQ17RN3 349 aaKnown RBP10.97□□□□□ -0.65
COL21A1-205ENST00000461489 TSKSQ9UJT2 592 aa10.97□□□□□ -0.65
COL21A1-205ENST00000461489 OSBPP22059 807 aa10.95□□□□□ -0.66
COL21A1-205ENST00000461489 CERKQ8TCT0 537 aa10.95□□□□□ -0.66
COL21A1-205ENST00000461489 CDCA7LQ96GN5 454 aa10.95□□□□□ -0.66
COL21A1-205ENST00000461489 PRSS12P56730 875 aa10.94□□□□□ -0.66
COL21A1-205ENST00000461489 LRCH3Q96II8 777 aa10.92□□□□□ -0.66
COL21A1-205ENST00000461489 CDHR5Q9HBB8 845 aa10.92□□□□□ -0.66
COL21A1-205ENST00000461489 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.92□□□□□ -0.66
COL21A1-205ENST00000461489 ARHGEF1Q92888 912 aaKnown RBP10.91□□□□□ -0.66
COL21A1-205ENST00000461489 IFFO2Q5TF58 517 aa10.9□□□□□ -0.66
COL21A1-205ENST00000461489 KCNV2Q8TDN2 545 aa10.9□□□□□ -0.66
COL21A1-205ENST00000461489 WBP1LQ9NX94 342 aa10.9□□□□□ -0.66
COL21A1-205ENST00000461489 SMAPO00193 183 aa10.89□□□□□ -0.67
COL21A1-205ENST00000461489 NYAP1Q6ZVC0 841 aa10.89□□□□□ -0.67
COL21A1-205ENST00000461489 FAM198AQ9UFP1 575 aa10.89□□□□□ -0.67
COL21A1-205ENST00000461489 HPS5Q9UPZ3 1129 aa10.89□□□□□ -0.67
COL21A1-205ENST00000461489 NBPF26B4DH59 902 aa10.88□□□□□ -0.67
COL21A1-205ENST00000461489 TSR3Q9UJK0 312 aaKnown RBP10.87□□□□□ -0.67
COL21A1-205ENST00000461489 PNMA3Q9UL41 463 aa10.87□□□□□ -0.67
COL21A1-205ENST00000461489 TATDN2Q93075 761 aa10.86□□□□□ -0.67
COL21A1-205ENST00000461489 MLLT3P42568 568 aaPredicted RBP10.85□□□□□ -0.67
COL21A1-205ENST00000461489 RBM27Q9P2N5 1060 aaKnown RBP10.84□□□□□ -0.67
COL21A1-205ENST00000461489 A0A0G2JS52 829 aa10.83□□□□□ -0.68
COL21A1-205ENST00000461489 C3orf80F5H4A9 247 aa10.83□□□□□ -0.68
COL21A1-205ENST00000461489 ITGBL1O95965 494 aaPredicted RBP10.83□□□□□ -0.68
COL21A1-205ENST00000461489 SAMD7Q7Z3H4 446 aa10.83□□□□□ -0.68
COL21A1-205ENST00000461489 PPP4CP60510 307 aa10.82□□□□□ -0.68
COL21A1-205ENST00000461489 NUDT18Q6ZVK8 323 aa10.82□□□□□ -0.68
COL21A1-205ENST00000461489 P3H3Q8IVL6 736 aa10.82□□□□□ -0.68
COL21A1-205ENST00000461489 PADI6Q6TGC4 694 aa10.81□□□□□ -0.68
COL21A1-205ENST00000461489 NPDC1Q9NQX5 325 aaPredicted RBP10.81□□□□□ -0.68
COL21A1-205ENST00000461489 PLCB2Q00722 1185 aa10.8□□□□□ -0.68
COL21A1-205ENST00000461489 HDGFP51858 240 aaKnown RBP10.79□□□□□ -0.68
COL21A1-205ENST00000461489 RNF40O75150 1001 aa10.78□□□□□ -0.68
COL21A1-205ENST00000461489 RGS20O76081 388 aa10.78□□□□□ -0.68
COL21A1-205ENST00000461489 KCNC4Q03721 635 aa10.78□□□□□ -0.68
COL21A1-205ENST00000461489 TTC13Q8NBP0 860 aa10.78□□□□□ -0.68
COL21A1-205ENST00000461489 NUTM2FA1L443 756 aa10.73□□□□□ -0.69
COL21A1-205ENST00000461489 SEMA3EO15041 775 aa10.72□□□□□ -0.69
COL21A1-205ENST00000461489 PTGDRQ13258 359 aa10.71□□□□□ -0.69
COL21A1-205ENST00000461489 SWT1Q5T5J6 900 aaKnown RBP10.71□□□□□ -0.69
COL21A1-205ENST00000461489 SLC4A3P48751 1232 aa10.69□□□□□ -0.7
COL21A1-205ENST00000461489 SLF2Q8IX21 1173 aa10.69□□□□□ -0.7
COL21A1-205ENST00000461489 EYA1Q99502 592 aa10.69□□□□□ -0.7
COL21A1-205ENST00000461489 HAP1P54257 671 aaPredicted RBP10.68□□□□□ -0.7
COL21A1-205ENST00000461489 NECTIN2Q92692 538 aa10.68□□□□□ -0.7
COL21A1-205ENST00000461489 TJAP1Q5JTD0 557 aa10.67□□□□□ -0.7
COL21A1-205ENST00000461489 MTRQ99707 1265 aa10.67□□□□□ -0.7
COL21A1-205ENST00000461489 FCHSD2O94868 740 aa10.66□□□□□ -0.7
COL21A1-205ENST00000461489 APLP1P51693 650 aa10.66□□□□□ -0.7
COL21A1-205ENST00000461489 IL21Q9HBE4 155 aa10.66□□□□□ -0.7
COL21A1-205ENST00000461489 RBM46Q8TBY0 533 aaKnown RBP10.65□□□□□ -0.7
COL21A1-205ENST00000461489 IRX2Q9BZI1 471 aaPredicted RBP10.65□□□□□ -0.7
COL21A1-205ENST00000461489 DNAJB2P25686 324 aa10.63□□□□□ -0.71
COL21A1-205ENST00000461489 ADGRG1Q9Y653 693 aa10.63□□□□□ -0.71
COL21A1-205ENST00000461489 FAM161AQ3B820 660 aa10.62□□□□□ -0.71
COL21A1-205ENST00000461489 TESPA1A2RU30 521 aaPredicted RBP10.61□□□□□ -0.71
COL21A1-205ENST00000461489 SMYD5Q6GMV2 418 aa10.61□□□□□ -0.71
COL21A1-205ENST00000461489 ZNF516Q92618 1163 aa10.6□□□□□ -0.71
COL21A1-205ENST00000461489 COPS2P61201 443 aa10.59□□□□□ -0.71
COL21A1-205ENST00000461489 RBM26Q5T8P6 1007 aaKnown RBP10.59□□□□□ -0.71
COL21A1-205ENST00000461489 RCCD1A6NED2 376 aa10.58□□□□□ -0.72
COL21A1-205ENST00000461489 PRR14Q9BWN1 585 aa10.58□□□□□ -0.72
COL21A1-205ENST00000461489 TMEM134Q9H6X4 195 aa10.58□□□□□ -0.72
COL21A1-205ENST00000461489 HIC1Q14526 733 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms