RNA–Protein interactions for RNA: ENST00000461194.5

NUP50-212, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-212ENST00000461194 RAPGEF2Q9Y4G8 1499 aa11.6□□□□□ -0.55
NUP50-212ENST00000461194 DDX27Q96GQ7 796 aaKnown RBP11.6□□□□□ -0.55
NUP50-212ENST00000461194 C2orf72A6NCS6 295 aa11.59□□□□□ -0.55
NUP50-212ENST00000461194 POTEB2H3BUK9 544 aa11.59□□□□□ -0.55
NUP50-212ENST00000461194 POTEJP0CG39 1038 aa11.58□□□□□ -0.56
NUP50-212ENST00000461194 TMEM92Q6UXU6 159 aa11.58□□□□□ -0.56
NUP50-212ENST00000461194 MFSD10Q14728 455 aa11.57□□□□□ -0.56
NUP50-212ENST00000461194 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.57□□□□□ -0.56
NUP50-212ENST00000461194 DSG2Q14126 1118 aa11.56□□□□□ -0.56
NUP50-212ENST00000461194 E2F4Q16254 413 aa11.56□□□□□ -0.56
NUP50-212ENST00000461194 PPP1R15BQ5SWA1 713 aa11.55□□□□□ -0.56
NUP50-212ENST00000461194 PRXQ9BXM0 1461 aa11.55□□□□□ -0.56
NUP50-212ENST00000461194 KIF3CO14782 793 aa11.53□□□□□ -0.56
NUP50-212ENST00000461194 EEA1Q15075 1411 aa11.52□□□□□ -0.56
NUP50-212ENST00000461194 FOXK1P85037 733 aa11.52□□□□□ -0.57
NUP50-212ENST00000461194 PLPP6Q8IY26 295 aa11.52□□□□□ -0.57
NUP50-212ENST00000461194 KCNV2Q8TDN2 545 aa11.52□□□□□ -0.57
NUP50-212ENST00000461194 IQGAP2Q13576 1575 aa11.51□□□□□ -0.57
NUP50-212ENST00000461194 P3H3Q8IVL6 736 aa11.51□□□□□ -0.57
NUP50-212ENST00000461194 CARMIL2Q6F5E8 1435 aa11.51□□□□□ -0.57
NUP50-212ENST00000461194 BCANQ96GW7 911 aa11.5□□□□□ -0.57
NUP50-212ENST00000461194 MAMSTRQ6ZN01 415 aa11.49□□□□□ -0.57
NUP50-212ENST00000461194 TNIKQ9UKE5 1360 aa11.49□□□□□ -0.57
NUP50-212ENST00000461194 PTPRGP23470 1445 aa11.49□□□□□ -0.57
NUP50-212ENST00000461194 UGGT2Q9NYU1 1516 aa11.48□□□□□ -0.57
NUP50-212ENST00000461194 DISP1Q96F81 1524 aa11.47□□□□□ -0.57
NUP50-212ENST00000461194 SCUBE2Q9NQ36 999 aa11.47□□□□□ -0.57
NUP50-212ENST00000461194 CAMK2BQ13554 666 aa11.46□□□□□ -0.57
NUP50-212ENST00000461194 NBR1Q14596 966 aa11.46□□□□□ -0.57
NUP50-212ENST00000461194 FAM9AQ8IZU1 332 aaPredicted RBP11.46□□□□□ -0.57
NUP50-212ENST00000461194 SLAIN1Q8ND83 568 aa11.45□□□□□ -0.58
NUP50-212ENST00000461194 ARHGEF1Q92888 912 aaKnown RBP11.45□□□□□ -0.58
NUP50-212ENST00000461194 TTBK1Q5TCY1 1321 aaPredicted RBP11.44□□□□□ -0.58
NUP50-212ENST00000461194 LHX8Q68G74 356 aa11.42□□□□□ -0.58
NUP50-212ENST00000461194 EMILIN3Q9NT22 766 aa11.42□□□□□ -0.58
NUP50-212ENST00000461194 ADCY10Q96PN6 1610 aa11.42□□□□□ -0.58
NUP50-212ENST00000461194 GOLGA3Q08378 1498 aa11.41□□□□□ -0.58
NUP50-212ENST00000461194 KIAA0556O60303 1618 aa11.41□□□□□ -0.58
NUP50-212ENST00000461194 UACAQ9BZF9 1416 aa11.41□□□□□ -0.58
NUP50-212ENST00000461194 UPF1Q92900 1129 aaKnown RBP eCLIP11.4□□□□□ -0.58
NUP50-212ENST00000461194 CTTNBP2Q8WZ74 1663 aa11.4□□□□□ -0.59
NUP50-212ENST00000461194 UHRF1BP1LA0JNW5 1464 aa11.39□□□□□ -0.59
NUP50-212ENST00000461194 MAPKBP1O60336 1514 aa11.39□□□□□ -0.59
NUP50-212ENST00000461194 DPYSL4O14531 572 aa11.38□□□□□ -0.59
NUP50-212ENST00000461194 ABCC2Q92887 1545 aa11.37□□□□□ -0.59
NUP50-212ENST00000461194 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
NUP50-212ENST00000461194 OTUD5Q96G74 571 aa11.37□□□□□ -0.59
NUP50-212ENST00000461194 FAM69CQ0P6D2 419 aa11.36□□□□□ -0.59
NUP50-212ENST00000461194 ABCC10Q5T3U5 1492 aa11.36□□□□□ -0.59
NUP50-212ENST00000461194 KIF21BO75037 1637 aa11.35□□□□□ -0.59
NUP50-212ENST00000461194 ARIH1Q9Y4X5 557 aaPredicted RBP11.35□□□□□ -0.59
NUP50-212ENST00000461194 KDM5BQ9UGL1 1544 aa11.34□□□□□ -0.59
NUP50-212ENST00000461194 PLB1Q6P1J6 1458 aa11.33□□□□□ -0.6
NUP50-212ENST00000461194 OXER1Q8TDS5 423 aa11.33□□□□□ -0.6
NUP50-212ENST00000461194 SEMA3EO15041 775 aa11.32□□□□□ -0.6
NUP50-212ENST00000461194 TBC1D12O60347 775 aa11.31□□□□□ -0.6
NUP50-212ENST00000461194 SLC34A2O95436 690 aa11.31□□□□□ -0.6
NUP50-212ENST00000461194 UBTFP17480 764 aaKnown RBP11.31□□□□□ -0.6
NUP50-212ENST00000461194 RANGAP1P46060 587 aaPredicted RBP11.31□□□□□ -0.6
NUP50-212ENST00000461194 ASXL2Q76L83 1435 aa11.31□□□□□ -0.6
NUP50-212ENST00000461194 ABCA8O94911 1581 aa11.3□□□□□ -0.6
NUP50-212ENST00000461194 SAMD9Q5K651 1589 aa11.3□□□□□ -0.6
NUP50-212ENST00000461194 PTCD2Q8WV60 388 aaKnown RBP11.3□□□□□ -0.6
NUP50-212ENST00000461194 DIP2BQ9P265 1576 aa11.29□□□□□ -0.6
NUP50-212ENST00000461194 SPDYE16A6NNV3 312 aaPredicted RBP11.28□□□□□ -0.6
NUP50-212ENST00000461194 DOK7Q18PE1 504 aa11.28□□□□□ -0.6
NUP50-212ENST00000461194 KIF13AQ9H1H9 1805 aa11.28□□□□□ -0.6
NUP50-212ENST00000461194 HOXB3P14651 431 aaPredicted RBP11.27□□□□□ -0.61
NUP50-212ENST00000461194 PCDHGA4Q9Y5G9 962 aa11.27□□□□□ -0.61
NUP50-212ENST00000461194 FHOD3Q2V2M9 1422 aa11.26□□□□□ -0.61
NUP50-212ENST00000461194 EFCAB5A4FU69 1503 aa11.25□□□□□ -0.61
NUP50-212ENST00000461194 ZCCHC11Q5TAX3 1644 aaKnown RBP11.25□□□□□ -0.61
NUP50-212ENST00000461194 SNPHO15079 494 aa11.25□□□□□ -0.61
NUP50-212ENST00000461194 EVI5O60447 810 aa11.25□□□□□ -0.61
NUP50-212ENST00000461194 PDIA6Q15084 440 aa11.25□□□□□ -0.61
NUP50-212ENST00000461194 ZNF710Q8N1W2 664 aa11.25□□□□□ -0.61
NUP50-212ENST00000461194 EPRSP07814 1512 aaKnown RBP11.25□□□□□ -0.61
NUP50-212ENST00000461194 GLI2P10070 1586 aa11.24□□□□□ -0.61
NUP50-212ENST00000461194 TESPA1A2RU30 521 aaPredicted RBP11.24□□□□□ -0.61
NUP50-212ENST00000461194 ATP10BO94823 1461 aa11.24□□□□□ -0.61
NUP50-212ENST00000461194 WDR7Q9Y4E6 1490 aa11.24□□□□□ -0.61
NUP50-212ENST00000461194 RIMBP2O15034 1052 aa11.23□□□□□ -0.61
NUP50-212ENST00000461194 MLLT3P42568 568 aaPredicted RBP11.23□□□□□ -0.61
NUP50-212ENST00000461194 ARSIQ5FYB1 569 aa11.23□□□□□ -0.61
NUP50-212ENST00000461194 ARID3CA6NKF2 412 aa11.22□□□□□ -0.61
NUP50-212ENST00000461194 KHSRPQ92945 711 aaKnown RBP eCLIP11.22□□□□□ -0.61
NUP50-212ENST00000461194 TULP1O00294 542 aaPredicted RBP11.21□□□□□ -0.61
NUP50-212ENST00000461194 RAPGEF6Q8TEU7 1601 aa11.2□□□□□ -0.62
NUP50-212ENST00000461194 NUP153P49790 1475 aaKnown RBP11.2□□□□□ -0.62
NUP50-212ENST00000461194 ARHGAP35Q9NRY4 1499 aa11.2□□□□□ -0.62
NUP50-212ENST00000461194 SMYD5Q6GMV2 418 aa11.2□□□□□ -0.62
NUP50-212ENST00000461194 KCNH8Q96L42 1107 aa11.2□□□□□ -0.62
NUP50-212ENST00000461194 ZNF316A6NFI3 1004 aaPredicted RBP11.19□□□□□ -0.62
NUP50-212ENST00000461194 GRXCR2A6NFK2 248 aa11.19□□□□□ -0.62
NUP50-212ENST00000461194 DDX12PQ92771 950 aa11.19□□□□□ -0.62
NUP50-212ENST00000461194 GPR153Q6NV75 609 aa11.18□□□□□ -0.62
NUP50-212ENST00000461194 ANO8Q9HCE9 1232 aaPredicted RBP11.18□□□□□ -0.62
NUP50-212ENST00000461194 FMN1Q68DA7 1419 aa11.18□□□□□ -0.62
NUP50-212ENST00000461194 NUDT7P0C024 238 aa11.17□□□□□ -0.62
NUP50-212ENST00000461194 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms