RNA–Protein interactions for RNA: ENST00000461132.1

SPTLC1-203, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 808 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-203ENST00000461132 CAMK2BQ13554 666 aa9.75□□□□□ -0.85
SPTLC1-203ENST00000461132 WNT2BQ93097 391 aa9.75□□□□□ -0.85
SPTLC1-203ENST00000461132 EPAS1Q99814 870 aa9.75□□□□□ -0.85
SPTLC1-203ENST00000461132 PAXIP1Q6ZW49 1069 aaPredicted RBP9.74□□□□□ -0.85
SPTLC1-203ENST00000461132 RTN4Q9NQC3 1192 aaKnown RBP9.74□□□□□ -0.85
SPTLC1-203ENST00000461132 BHMG1C9JSJ3 638 aaPredicted RBP9.72□□□□□ -0.85
SPTLC1-203ENST00000461132 THSD4Q6ZMP0 1018 aa9.7□□□□□ -0.86
SPTLC1-203ENST00000461132 RABGEF1Q9UJ41 708 aa9.7□□□□□ -0.86
SPTLC1-203ENST00000461132 DDX12PQ92771 950 aa9.69□□□□□ -0.86
SPTLC1-203ENST00000461132 RBM33Q96EV2 1170 aaKnown RBP9.69□□□□□ -0.86
SPTLC1-203ENST00000461132 PROX2Q3B8N5 592 aa9.68□□□□□ -0.86
SPTLC1-203ENST00000461132 C6orf132Q5T0Z8 1188 aa9.68□□□□□ -0.86
SPTLC1-203ENST00000461132 ANKK1Q8NFD2 765 aa9.68□□□□□ -0.86
SPTLC1-203ENST00000461132 COL9A1P20849 921 aa9.67□□□□□ -0.86
SPTLC1-203ENST00000461132 NBR1Q14596 966 aa9.67□□□□□ -0.86
SPTLC1-203ENST00000461132 E2F4Q16254 413 aa9.67□□□□□ -0.86
SPTLC1-203ENST00000461132 SPDYE16A6NNV3 312 aaPredicted RBP9.66□□□□□ -0.86
SPTLC1-203ENST00000461132 MAP3K7O43318 606 aa9.65□□□□□ -0.86
SPTLC1-203ENST00000461132 LAPTM4BQ86VI4 370 aa9.65□□□□□ -0.86
SPTLC1-203ENST00000461132 PDIA6Q15084 440 aa9.64□□□□□ -0.87
SPTLC1-203ENST00000461132 KIAA1468Q9P260 1216 aa9.64□□□□□ -0.87
SPTLC1-203ENST00000461132 ONECUT3O60422 494 aaPredicted RBP9.63□□□□□ -0.87
SPTLC1-203ENST00000461132 TRIM6-TRIM34B2RNG4 842 aa9.61□□□□□ -0.87
SPTLC1-203ENST00000461132 EN1Q05925 392 aaPredicted RBP9.61□□□□□ -0.87
SPTLC1-203ENST00000461132 PACS2Q86VP3 889 aa9.6□□□□□ -0.87
SPTLC1-203ENST00000461132 GRXCR2A6NFK2 248 aa9.59□□□□□ -0.87
SPTLC1-203ENST00000461132 ZFRQ96KR1 1074 aaKnown RBP9.59□□□□□ -0.87
SPTLC1-203ENST00000461132 SEPT9Q9UHD8 586 aaPredicted RBP9.59□□□□□ -0.87
SPTLC1-203ENST00000461132 BCAMP50895 628 aa9.57□□□□□ -0.88
SPTLC1-203ENST00000461132 FAM98CQ17RN3 349 aaKnown RBP9.57□□□□□ -0.88
SPTLC1-203ENST00000461132 SOWAHBA6NEL2 793 aa9.56□□□□□ -0.88
SPTLC1-203ENST00000461132 TSR1Q2NL82 804 aaKnown RBP9.56□□□□□ -0.88
SPTLC1-203ENST00000461132 NYAP1Q6ZVC0 841 aa9.56□□□□□ -0.88
SPTLC1-203ENST00000461132 CERKQ8TCT0 537 aa9.56□□□□□ -0.88
SPTLC1-203ENST00000461132 LRCH3Q96II8 777 aa9.55□□□□□ -0.88
SPTLC1-203ENST00000461132 IFFO2Q5TF58 517 aa9.54□□□□□ -0.88
SPTLC1-203ENST00000461132 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.54□□□□□ -0.88
SPTLC1-203ENST00000461132 ARIH1Q9Y4X5 557 aaPredicted RBP9.54□□□□□ -0.88
SPTLC1-203ENST00000461132 CDCA7LQ96GN5 454 aa9.51□□□□□ -0.89
SPTLC1-203ENST00000461132 NBPF26B4DH59 902 aa9.5□□□□□ -0.89
SPTLC1-203ENST00000461132 HDGFP51858 240 aaKnown RBP9.5□□□□□ -0.89
SPTLC1-203ENST00000461132 PRSS12P56730 875 aa9.5□□□□□ -0.89
SPTLC1-203ENST00000461132 TSR3Q9UJK0 312 aaKnown RBP9.5□□□□□ -0.89
SPTLC1-203ENST00000461132 TSKSQ9UJT2 592 aa9.5□□□□□ -0.89
SPTLC1-203ENST00000461132 HPS5Q9UPZ3 1129 aa9.5□□□□□ -0.89
SPTLC1-203ENST00000461132 RGS20O76081 388 aa9.49□□□□□ -0.89
SPTLC1-203ENST00000461132 WBP1LQ9NX94 342 aa9.49□□□□□ -0.89
SPTLC1-203ENST00000461132 A0A0G2JS52 829 aa9.48□□□□□ -0.89
SPTLC1-203ENST00000461132 PPP4CP60510 307 aa9.48□□□□□ -0.89
SPTLC1-203ENST00000461132 PNMA3Q9UL41 463 aa9.47□□□□□ -0.89
SPTLC1-203ENST00000461132 KCNC4Q03721 635 aa9.46□□□□□ -0.9
SPTLC1-203ENST00000461132 SMAPO00193 183 aa9.45□□□□□ -0.9
SPTLC1-203ENST00000461132 RNF40O75150 1001 aa9.45□□□□□ -0.9
SPTLC1-203ENST00000461132 ITGBL1O95965 494 aaPredicted RBP9.45□□□□□ -0.9
SPTLC1-203ENST00000461132 OSBPP22059 807 aa9.45□□□□□ -0.9
SPTLC1-203ENST00000461132 TATDN2Q93075 761 aa9.44□□□□□ -0.9
SPTLC1-203ENST00000461132 SLC4A3P48751 1232 aa9.43□□□□□ -0.9
SPTLC1-203ENST00000461132 SAMD7Q7Z3H4 446 aa9.43□□□□□ -0.9
SPTLC1-203ENST00000461132 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
SPTLC1-203ENST00000461132 CDHR5Q9HBB8 845 aa9.42□□□□□ -0.9
SPTLC1-203ENST00000461132 TSHZ2Q9NRE2 1034 aa9.42□□□□□ -0.9
SPTLC1-203ENST00000461132 RBM27Q9P2N5 1060 aaKnown RBP9.42□□□□□ -0.9
SPTLC1-203ENST00000461132 NUDT18Q6ZVK8 323 aa9.41□□□□□ -0.9
SPTLC1-203ENST00000461132 NECTIN2Q92692 538 aa9.41□□□□□ -0.9
SPTLC1-203ENST00000461132 IRX2Q9BZI1 471 aaPredicted RBP9.41□□□□□ -0.9
SPTLC1-203ENST00000461132 PRIM1P49642 420 aaKnown RBP9.4□□□□□ -0.9
SPTLC1-203ENST00000461132 P3H3Q8IVL6 736 aa9.39□□□□□ -0.91
SPTLC1-203ENST00000461132 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
SPTLC1-203ENST00000461132 PADI6Q6TGC4 694 aa9.36□□□□□ -0.91
SPTLC1-203ENST00000461132 KCNV2Q8TDN2 545 aa9.36□□□□□ -0.91
SPTLC1-203ENST00000461132 SLF2Q8IX21 1173 aa9.34□□□□□ -0.91
SPTLC1-203ENST00000461132 MLLT3P42568 568 aaPredicted RBP9.32□□□□□ -0.92
SPTLC1-203ENST00000461132 IL21Q9HBE4 155 aa9.32□□□□□ -0.92
SPTLC1-203ENST00000461132 NUTM2FA1L443 756 aa9.31□□□□□ -0.92
SPTLC1-203ENST00000461132 SWT1Q5T5J6 900 aaKnown RBP9.31□□□□□ -0.92
SPTLC1-203ENST00000461132 C3orf80F5H4A9 247 aa9.3□□□□□ -0.92
SPTLC1-203ENST00000461132 MTRQ99707 1265 aa9.3□□□□□ -0.92
SPTLC1-203ENST00000461132 NPDC1Q9NQX5 325 aaPredicted RBP9.3□□□□□ -0.92
SPTLC1-203ENST00000461132 TTC13Q8NBP0 860 aa9.29□□□□□ -0.92
SPTLC1-203ENST00000461132 PRR14Q9BWN1 585 aa9.29□□□□□ -0.92
SPTLC1-203ENST00000461132 TJAP1Q5JTD0 557 aa9.28□□□□□ -0.92
SPTLC1-203ENST00000461132 RBM46Q8TBY0 533 aaKnown RBP9.28□□□□□ -0.92
SPTLC1-203ENST00000461132 PTGDRQ13258 359 aa9.26□□□□□ -0.93
SPTLC1-203ENST00000461132 DNAJB2P25686 324 aa9.25□□□□□ -0.93
SPTLC1-203ENST00000461132 GGCXP38435 758 aa9.25□□□□□ -0.93
SPTLC1-203ENST00000461132 APLP1P51693 650 aa9.25□□□□□ -0.93
SPTLC1-203ENST00000461132 FCHSD2O94868 740 aa9.24□□□□□ -0.93
SPTLC1-203ENST00000461132 COPS2P61201 443 aa9.24□□□□□ -0.93
SPTLC1-203ENST00000461132 SMYD5Q6GMV2 418 aa9.24□□□□□ -0.93
SPTLC1-203ENST00000461132 EYA1Q99502 592 aa9.24□□□□□ -0.93
SPTLC1-203ENST00000461132 PLCB2Q00722 1185 aa9.23□□□□□ -0.93
SPTLC1-203ENST00000461132 Q6ZNB5 142 aa9.23□□□□□ -0.93
SPTLC1-203ENST00000461132 SEMA3EO15041 775 aa9.22□□□□□ -0.93
SPTLC1-203ENST00000461132 LAPTM4AQ15012 233 aa9.21□□□□□ -0.94
SPTLC1-203ENST00000461132 KMT5BQ4FZB7 885 aa9.21□□□□□ -0.94
SPTLC1-203ENST00000461132 PPP1R18Q6NYC8 613 aa9.21□□□□□ -0.94
SPTLC1-203ENST00000461132 PCDHB3Q9Y5E6 796 aa9.21□□□□□ -0.94
SPTLC1-203ENST00000461132 ZNF516Q92618 1163 aa9.2□□□□□ -0.94
SPTLC1-203ENST00000461132 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.2□□□□□ -0.94
SPTLC1-203ENST00000461132 PRKD2Q9BZL6 878 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms