RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 JPH4Q96JJ6 628 aa6.37□□□□□ -1.39
HPS3-203ENST00000460822 BHMG1C9JSJ3 638 aaPredicted RBP6.36□□□□□ -1.39
HPS3-203ENST00000460822 FOSBP53539 338 aa6.36□□□□□ -1.39
HPS3-203ENST00000460822 THSD4Q6ZMP0 1018 aa6.36□□□□□ -1.39
HPS3-203ENST00000460822 ZDHHC16Q969W1 377 aa6.35□□□□□ -1.39
HPS3-203ENST00000460822 KCNK17Q96T54 332 aa6.35□□□□□ -1.39
HPS3-203ENST00000460822 SPDYE16A6NNV3 312 aaPredicted RBP6.35□□□□□ -1.39
HPS3-203ENST00000460822 PTPREP23469 700 aa6.35□□□□□ -1.39
HPS3-203ENST00000460822 TPRNQ4KMQ1 711 aa6.34□□□□□ -1.39
HPS3-203ENST00000460822 PHF14O94880 888 aa6.33□□□□□ -1.4
HPS3-203ENST00000460822 TYW1BQ6NUM6 668 aa6.33□□□□□ -1.4
HPS3-203ENST00000460822 BCL2L12Q9HB09 334 aa6.33□□□□□ -1.4
HPS3-203ENST00000460822 FBXW7Q969H0 707 aa6.33□□□□□ -1.4
HPS3-203ENST00000460822 EPAS1Q99814 870 aa6.33□□□□□ -1.4
HPS3-203ENST00000460822 DDX12PQ92771 950 aa6.31□□□□□ -1.4
HPS3-203ENST00000460822 ADAM33Q9BZ11 813 aa6.31□□□□□ -1.4
HPS3-203ENST00000460822 PCDHGA10Q9Y5H3 936 aa6.31□□□□□ -1.4
HPS3-203ENST00000460822 GOLGA8CPA6NN73 597 aa6.3□□□□□ -1.4
HPS3-203ENST00000460822 PDIA6Q15084 440 aa6.3□□□□□ -1.4
HPS3-203ENST00000460822 WNT2BQ93097 391 aa6.3□□□□□ -1.4
HPS3-203ENST00000460822 ZBED2Q9BTP6 218 aa6.29□□□□□ -1.4
HPS3-203ENST00000460822 ARIH1Q9Y4X5 557 aaPredicted RBP6.29□□□□□ -1.4
HPS3-203ENST00000460822 NBR1Q14596 966 aa6.28□□□□□ -1.4
HPS3-203ENST00000460822 P3H3Q8IVL6 736 aa6.28□□□□□ -1.4
HPS3-203ENST00000460822 MRPL50Q8N5N7 158 aaKnown RBP6.28□□□□□ -1.4
HPS3-203ENST00000460822 RBM33Q96EV2 1170 aaKnown RBP6.28□□□□□ -1.4
HPS3-203ENST00000460822 GRXCR2A6NFK2 248 aa6.27□□□□□ -1.4
HPS3-203ENST00000460822 ITGBL1O95965 494 aaPredicted RBP6.27□□□□□ -1.4
HPS3-203ENST00000460822 ARHGEF1Q92888 912 aaKnown RBP6.27□□□□□ -1.4
HPS3-203ENST00000460822 PPP1R3GB7ZBB8 358 aa6.26□□□□□ -1.41
HPS3-203ENST00000460822 MAP3K7O43318 606 aa6.26□□□□□ -1.41
HPS3-203ENST00000460822 C6orf132Q5T0Z8 1188 aa6.26□□□□□ -1.41
HPS3-203ENST00000460822 Q6ZNB5 142 aa6.26□□□□□ -1.41
HPS3-203ENST00000460822 NBPF3Q9H094 633 aa6.25□□□□□ -1.41
HPS3-203ENST00000460822 KCNV2Q8TDN2 545 aa6.24□□□□□ -1.41
HPS3-203ENST00000460822 EN1Q05925 392 aaPredicted RBP6.24□□□□□ -1.41
HPS3-203ENST00000460822 LAPTM4AQ15012 233 aa6.23□□□□□ -1.41
HPS3-203ENST00000460822 COL9A1P20849 921 aa6.22□□□□□ -1.41
HPS3-203ENST00000460822 NYAP1Q6ZVC0 841 aa6.21□□□□□ -1.42
HPS3-203ENST00000460822 CERKQ8TCT0 537 aa6.2□□□□□ -1.42
HPS3-203ENST00000460822 RABGEF1Q9UJ41 708 aa6.2□□□□□ -1.42
HPS3-203ENST00000460822 ONECUT3O60422 494 aaPredicted RBP6.2□□□□□ -1.42
HPS3-203ENST00000460822 PROX2Q3B8N5 592 aa6.2□□□□□ -1.42
HPS3-203ENST00000460822 ANKK1Q8NFD2 765 aa6.2□□□□□ -1.42
HPS3-203ENST00000460822 TSR1Q2NL82 804 aaKnown RBP6.19□□□□□ -1.42
HPS3-203ENST00000460822 TRIM6-TRIM34B2RNG4 842 aa6.18□□□□□ -1.42
HPS3-203ENST00000460822 OSBPP22059 807 aa6.18□□□□□ -1.42
HPS3-203ENST00000460822 LAPTM4BQ86VI4 370 aa6.18□□□□□ -1.42
HPS3-203ENST00000460822 PACS2Q86VP3 889 aa6.18□□□□□ -1.42
HPS3-203ENST00000460822 KIAA1468Q9P260 1216 aa6.18□□□□□ -1.42
HPS3-203ENST00000460822 KCNC4Q03721 635 aa6.18□□□□□ -1.42
HPS3-203ENST00000460822 TRAF7Q6Q0C0 670 aa6.18□□□□□ -1.42
HPS3-203ENST00000460822 SOWAHBA6NEL2 793 aa6.17□□□□□ -1.42
HPS3-203ENST00000460822 SMYD5Q6GMV2 418 aa6.17□□□□□ -1.42
HPS3-203ENST00000460822 LCE2BO14633 110 aa6.16□□□□□ -1.42
HPS3-203ENST00000460822 MLLT3P42568 568 aaPredicted RBP6.16□□□□□ -1.42
HPS3-203ENST00000460822 PRSS12P56730 875 aa6.15□□□□□ -1.42
HPS3-203ENST00000460822 CDCA7LQ96GN5 454 aa6.15□□□□□ -1.42
HPS3-203ENST00000460822 PRIM1P49642 420 aaKnown RBP6.15□□□□□ -1.43
HPS3-203ENST00000460822 NUTM2FA1L443 756 aa6.14□□□□□ -1.43
HPS3-203ENST00000460822 SEMA3EO15041 775 aa6.14□□□□□ -1.43
HPS3-203ENST00000460822 GFRA3O60609 400 aa6.14□□□□□ -1.43
HPS3-203ENST00000460822 CDHR5Q9HBB8 845 aa6.14□□□□□ -1.43
HPS3-203ENST00000460822 SEPT9Q9UHD8 586 aaPredicted RBP6.14□□□□□ -1.43
HPS3-203ENST00000460822 NBPF26B4DH59 902 aa6.13□□□□□ -1.43
HPS3-203ENST00000460822 BCAMP50895 628 aa6.13□□□□□ -1.43
HPS3-203ENST00000460822 HDGFP51858 240 aaKnown RBP6.13□□□□□ -1.43
HPS3-203ENST00000460822 FAM98CQ17RN3 349 aaKnown RBP6.13□□□□□ -1.43
HPS3-203ENST00000460822 TSKSQ9UJT2 592 aa6.13□□□□□ -1.43
HPS3-203ENST00000460822 ZFRQ96KR1 1074 aaKnown RBP6.12□□□□□ -1.43
HPS3-203ENST00000460822 PNMA3Q9UL41 463 aa6.12□□□□□ -1.43
HPS3-203ENST00000460822 TULP1O00294 542 aaPredicted RBP6.11□□□□□ -1.43
HPS3-203ENST00000460822 WBP1LQ9NX94 342 aa6.11□□□□□ -1.43
HPS3-203ENST00000460822 RBM27Q9P2N5 1060 aaKnown RBP6.11□□□□□ -1.43
HPS3-203ENST00000460822 TATDN2Q93075 761 aa6.11□□□□□ -1.43
HPS3-203ENST00000460822 NRG2O14511 850 aaPredicted RBP6.1□□□□□ -1.43
HPS3-203ENST00000460822 LRCH3Q96II8 777 aa6.1□□□□□ -1.43
HPS3-203ENST00000460822 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.1□□□□□ -1.43
HPS3-203ENST00000460822 TESPA1A2RU30 521 aaPredicted RBP6.09□□□□□ -1.43
HPS3-203ENST00000460822 PADI6Q6TGC4 694 aa6.09□□□□□ -1.43
HPS3-203ENST00000460822 SMAPO00193 183 aa6.09□□□□□ -1.43
HPS3-203ENST00000460822 FCHSD2O94868 740 aa6.09□□□□□ -1.43
HPS3-203ENST00000460822 NUDT18Q6ZVK8 323 aa6.09□□□□□ -1.43
HPS3-203ENST00000460822 SLC4A3P48751 1232 aa6.08□□□□□ -1.44
HPS3-203ENST00000460822 TSR3Q9UJK0 312 aaKnown RBP6.08□□□□□ -1.44
HPS3-203ENST00000460822 NPDC1Q9NQX5 325 aaPredicted RBP6.07□□□□□ -1.44
HPS3-203ENST00000460822 FAM198AQ9UFP1 575 aa6.07□□□□□ -1.44
HPS3-203ENST00000460822 PTGDRQ13258 359 aa6.07□□□□□ -1.44
HPS3-203ENST00000460822 PPP4CP60510 307 aa6.06□□□□□ -1.44
HPS3-203ENST00000460822 HPS5Q9UPZ3 1129 aa6.06□□□□□ -1.44
HPS3-203ENST00000460822 RNF40O75150 1001 aa6.06□□□□□ -1.44
HPS3-203ENST00000460822 RBM26Q5T8P6 1007 aaKnown RBP6.06□□□□□ -1.44
HPS3-203ENST00000460822 ZNF787Q6DD87 383 aa6.06□□□□□ -1.44
HPS3-203ENST00000460822 SAMD7Q7Z3H4 446 aa6.06□□□□□ -1.44
HPS3-203ENST00000460822 V9GY48 417 aaPredicted RBP6.06□□□□□ -1.44
HPS3-203ENST00000460822 TTC13Q8NBP0 860 aa6.05□□□□□ -1.44
HPS3-203ENST00000460822 RBM46Q8TBY0 533 aaKnown RBP6.05□□□□□ -1.44
HPS3-203ENST00000460822 NECTIN2Q92692 538 aa6.05□□□□□ -1.44
HPS3-203ENST00000460822 PRKD2Q9BZL6 878 aa6.04□□□□□ -1.44
HPS3-203ENST00000460822 HIC1Q14526 733 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms