RNA–Protein interactions for RNA: ENST00000460731.5

PTPN12-209, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 2

Gene PTPN12, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-209ENST00000460731 GTPBP6O43824 516 aaPredicted RBP10.42□□□□□ -0.74
PTPN12-209ENST00000460731 IRX2Q9BZI1 471 aaPredicted RBP10.42□□□□□ -0.74
PTPN12-209ENST00000460731 CECR2Q9BXF3 1484 aa10.42□□□□□ -0.74
PTPN12-209ENST00000460731 PPP1R3GB7ZBB8 358 aa10.41□□□□□ -0.74
PTPN12-209ENST00000460731 RABGEF1Q9UJ41 708 aa10.41□□□□□ -0.74
PTPN12-209ENST00000460731 ITGBL1O95965 494 aaPredicted RBP10.4□□□□□ -0.74
PTPN12-209ENST00000460731 DDX27Q96GQ7 796 aaKnown RBP10.4□□□□□ -0.74
PTPN12-209ENST00000460731 LARP6Q9BRS8 491 aaKnown RBP10.4□□□□□ -0.74
PTPN12-209ENST00000460731 EMILIN3Q9NT22 766 aa10.4□□□□□ -0.74
PTPN12-209ENST00000460731 PCDHGA10Q9Y5H3 936 aa10.4□□□□□ -0.74
PTPN12-209ENST00000460731 EIF4G1Q04637 1599 aaKnown RBP10.39□□□□□ -0.75
PTPN12-209ENST00000460731 COL9A1P20849 921 aa10.38□□□□□ -0.75
PTPN12-209ENST00000460731 MAP3K9P80192 1104 aa10.38□□□□□ -0.75
PTPN12-209ENST00000460731 PROX2Q3B8N5 592 aa10.37□□□□□ -0.75
PTPN12-209ENST00000460731 BAZ1AQ9NRL2 1556 aaPredicted RBP10.36□□□□□ -0.75
PTPN12-209ENST00000460731 LAPTM4BQ86VI4 370 aa10.35□□□□□ -0.75
PTPN12-209ENST00000460731 ANKK1Q8NFD2 765 aa10.35□□□□□ -0.75
PTPN12-209ENST00000460731 FBXW7Q969H0 707 aa10.34□□□□□ -0.75
PTPN12-209ENST00000460731 SOWAHBA6NEL2 793 aa10.33□□□□□ -0.76
PTPN12-209ENST00000460731 PHF14O94880 888 aa10.33□□□□□ -0.76
PTPN12-209ENST00000460731 SMARCA4P51532 1647 aa10.33□□□□□ -0.76
PTPN12-209ENST00000460731 MROH2BQ7Z745 1585 aa10.32□□□□□ -0.76
PTPN12-209ENST00000460731 ONECUT3O60422 494 aaPredicted RBP10.32□□□□□ -0.76
PTPN12-209ENST00000460731 BCAMP50895 628 aa10.32□□□□□ -0.76
PTPN12-209ENST00000460731 TYW1BQ6NUM6 668 aa10.32□□□□□ -0.76
PTPN12-209ENST00000460731 RSF1Q96T23 1441 aaPredicted RBP10.31□□□□□ -0.76
PTPN12-209ENST00000460731 PEG3Q9GZU2 1588 aa10.31□□□□□ -0.76
PTPN12-209ENST00000460731 NYAP1Q6ZVC0 841 aa10.3□□□□□ -0.76
PTPN12-209ENST00000460731 NCAPD3P42695 1498 aa10.3□□□□□ -0.76
PTPN12-209ENST00000460731 ZFRQ96KR1 1074 aaKnown RBP10.29□□□□□ -0.76
PTPN12-209ENST00000460731 KIAA1468Q9P260 1216 aa10.29□□□□□ -0.76
PTPN12-209ENST00000460731 CC2D2AQ9P2K1 1620 aa10.29□□□□□ -0.76
PTPN12-209ENST00000460731 ATAD2BQ9ULI0 1458 aa10.28□□□□□ -0.76
PTPN12-209ENST00000460731 CADPS2Q86UW7 1296 aa10.27□□□□□ -0.77
PTPN12-209ENST00000460731 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
PTPN12-209ENST00000460731 WBP1LQ9NX94 342 aa10.26□□□□□ -0.77
PTPN12-209ENST00000460731 C6orf132Q5T0Z8 1188 aa10.25□□□□□ -0.77
PTPN12-209ENST00000460731 SMARCA2P51531 1590 aa10.24□□□□□ -0.77
PTPN12-209ENST00000460731 EPAS1Q99814 870 aa10.24□□□□□ -0.77
PTPN12-209ENST00000460731 TRIM6-TRIM34B2RNG4 842 aa10.22□□□□□ -0.77
PTPN12-209ENST00000460731 KCNC4Q03721 635 aa10.22□□□□□ -0.77
PTPN12-209ENST00000460731 SEPT9Q9UHD8 586 aaPredicted RBP10.22□□□□□ -0.77
PTPN12-209ENST00000460731 FAM98CQ17RN3 349 aaKnown RBP10.21□□□□□ -0.77
PTPN12-209ENST00000460731 HMGXB3Q12766 1538 aa10.2□□□□□ -0.78
PTPN12-209ENST00000460731 TSR3Q9UJK0 312 aaKnown RBP10.18□□□□□ -0.78
PTPN12-209ENST00000460731 DPYSL4O14531 572 aa10.17□□□□□ -0.78
PTPN12-209ENST00000460731 WIZO95785 1651 aa10.17□□□□□ -0.78
PTPN12-209ENST00000460731 Q6ZNB5 142 aa10.16□□□□□ -0.78
PTPN12-209ENST00000460731 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.16□□□□□ -0.78
PTPN12-209ENST00000460731 LCE2BO14633 110 aa10.15□□□□□ -0.78
PTPN12-209ENST00000460731 LRCH3Q96II8 777 aa10.14□□□□□ -0.79
PTPN12-209ENST00000460731 HPS5Q9UPZ3 1129 aa10.14□□□□□ -0.79
PTPN12-209ENST00000460731 BAZ1BQ9UIG0 1483 aaKnown RBP10.14□□□□□ -0.79
PTPN12-209ENST00000460731 TSKSQ9UJT2 592 aa10.13□□□□□ -0.79
PTPN12-209ENST00000460731 LAPTM4AQ15012 233 aa10.12□□□□□ -0.79
PTPN12-209ENST00000460731 RBM33Q96EV2 1170 aaKnown RBP10.12□□□□□ -0.79
PTPN12-209ENST00000460731 DDX12PQ92771 950 aa10.11□□□□□ -0.79
PTPN12-209ENST00000460731 EN1Q05925 392 aaPredicted RBP10.1□□□□□ -0.79
PTPN12-209ENST00000460731 TOP2AP11388 1531 aaKnown RBP10.1□□□□□ -0.79
PTPN12-209ENST00000460731 TJAP1Q5JTD0 557 aa10.09□□□□□ -0.79
PTPN12-209ENST00000460731 TSR1Q2NL82 804 aaKnown RBP10.08□□□□□ -0.8
PTPN12-209ENST00000460731 PACS2Q86VP3 889 aa10.08□□□□□ -0.8
PTPN12-209ENST00000460731 PDIA6Q15084 440 aa10.07□□□□□ -0.8
PTPN12-209ENST00000460731 FAM198AQ9UFP1 575 aa10.06□□□□□ -0.8
PTPN12-209ENST00000460731 SUPT5HO00267 1087 aaKnown RBP10.05□□□□□ -0.8
PTPN12-209ENST00000460731 PPP4CP60510 307 aa10.04□□□□□ -0.8
PTPN12-209ENST00000460731 NBR1Q14596 966 aa10.04□□□□□ -0.8
PTPN12-209ENST00000460731 MAP3K7O43318 606 aa10.03□□□□□ -0.8
PTPN12-209ENST00000460731 GFRA3O60609 400 aa10.03□□□□□ -0.8
PTPN12-209ENST00000460731 TRAF7Q6Q0C0 670 aa10.03□□□□□ -0.8
PTPN12-209ENST00000460731 CDCA7LQ96GN5 454 aa10.03□□□□□ -0.8
PTPN12-209ENST00000460731 C3orf80F5H4A9 247 aa10.02□□□□□ -0.81
PTPN12-209ENST00000460731 PRSS12P56730 875 aa10.02□□□□□ -0.81
PTPN12-209ENST00000460731 SAMD7Q7Z3H4 446 aa10.02□□□□□ -0.81
PTPN12-209ENST00000460731 SPDYE16A6NNV3 312 aaPredicted RBP10.01□□□□□ -0.81
PTPN12-209ENST00000460731 PRIM1P49642 420 aaKnown RBP10.01□□□□□ -0.81
PTPN12-209ENST00000460731 CCDC88BA6NC98 1476 aa10.01□□□□□ -0.81
PTPN12-209ENST00000460731 SMAPO00193 183 aa10□□□□□ -0.81
PTPN12-209ENST00000460731 MTRQ99707 1265 aa10□□□□□ -0.81
PTPN12-209ENST00000460731 PRKD2Q9BZL6 878 aa10□□□□□ -0.81
PTPN12-209ENST00000460731 V9GY48 417 aaPredicted RBP10□□□□□ -0.81
PTPN12-209ENST00000460731 NRG2O14511 850 aaPredicted RBP9.99□□□□□ -0.81
PTPN12-209ENST00000460731 CERKQ8TCT0 537 aa9.99□□□□□ -0.81
PTPN12-209ENST00000460731 IL21Q9HBE4 155 aa9.99□□□□□ -0.81
PTPN12-209ENST00000460731 PPP1R18Q6NYC8 613 aa9.98□□□□□ -0.81
PTPN12-209ENST00000460731 TATDN2Q93075 761 aa9.97□□□□□ -0.81
PTPN12-209ENST00000460731 ARIH1Q9Y4X5 557 aaPredicted RBP9.97□□□□□ -0.81
PTPN12-209ENST00000460731 CADPSQ9ULU8 1353 aa9.97□□□□□ -0.81
PTPN12-209ENST00000460731 ZNF516Q92618 1163 aa9.95□□□□□ -0.82
PTPN12-209ENST00000460731 CFTRP13569 1480 aa9.95□□□□□ -0.82
PTPN12-209ENST00000460731 NBPF26B4DH59 902 aa9.94□□□□□ -0.82
PTPN12-209ENST00000460731 APLP1P51693 650 aa9.93□□□□□ -0.82
PTPN12-209ENST00000460731 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.93□□□□□ -0.82
PTPN12-209ENST00000460731 RBM27Q9P2N5 1060 aaKnown RBP9.93□□□□□ -0.82
PTPN12-209ENST00000460731 PNMA3Q9UL41 463 aa9.92□□□□□ -0.82
PTPN12-209ENST00000460731 LAMC3Q9Y6N6 1575 aa9.92□□□□□ -0.82
PTPN12-209ENST00000460731 OSBPP22059 807 aa9.91□□□□□ -0.82
PTPN12-209ENST00000460731 TTC13Q8NBP0 860 aa9.91□□□□□ -0.82
PTPN12-209ENST00000460731 NUDT18Q6ZVK8 323 aa9.89□□□□□ -0.83
PTPN12-209ENST00000460731 NKX2-3Q8TAU0 364 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms