RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 ABCC10Q5T3U5 1492 aa8.19□□□□□ -1.1
HLA-DQA1-205ENST00000460633 MAGI2Q86UL8 1455 aa8.19□□□□□ -1.1
HLA-DQA1-205ENST00000460633 TSHZ2Q9NRE2 1034 aa8.19□□□□□ -1.1
HLA-DQA1-205ENST00000460633 RBM19Q9Y4C8 960 aaKnown RBP8.19□□□□□ -1.1
HLA-DQA1-205ENST00000460633 ADGRL1O94910 1474 aa8.18□□□□□ -1.1
HLA-DQA1-205ENST00000460633 ZCCHC11Q5TAX3 1644 aaKnown RBP8.18□□□□□ -1.1
HLA-DQA1-205ENST00000460633 MAGI3Q5TCQ9 1506 aa8.18□□□□□ -1.1
HLA-DQA1-205ENST00000460633 TPRNQ4KMQ1 711 aa8.18□□□□□ -1.1
HLA-DQA1-205ENST00000460633 ZNF518AQ6AHZ1 1483 aa8.18□□□□□ -1.1
HLA-DQA1-205ENST00000460633 MLECQ14165 292 aa8.18□□□□□ -1.1
HLA-DQA1-205ENST00000460633 CCDC141Q6ZP82 1450 aa8.18□□□□□ -1.1
HLA-DQA1-205ENST00000460633 NUP153P49790 1475 aaKnown RBP8.17□□□□□ -1.1
HLA-DQA1-205ENST00000460633 CNTLNQ9NXG0 1405 aa8.17□□□□□ -1.1
HLA-DQA1-205ENST00000460633 CSB-PGBD3P0DP91 1061 aa8.17□□□□□ -1.1
HLA-DQA1-205ENST00000460633 TONSLQ96HA7 1378 aa8.17□□□□□ -1.1
HLA-DQA1-205ENST00000460633 DEKP35659 375 aaKnown RBP8.16□□□□□ -1.1
HLA-DQA1-205ENST00000460633 STAC3Q96MF2 364 aa8.16□□□□□ -1.1
HLA-DQA1-205ENST00000460633 CHMP4BQ9H444 224 aaKnown RBP8.16□□□□□ -1.1
HLA-DQA1-205ENST00000460633 RTEL1-TNFRSF6BF6WH68 1400 aa8.16□□□□□ -1.1
HLA-DQA1-205ENST00000460633 FGD6Q6ZV73 1430 aa8.16□□□□□ -1.1
HLA-DQA1-205ENST00000460633 SCAPERQ9BY12 1400 aa8.15□□□□□ -1.1
HLA-DQA1-205ENST00000460633 MYO5CQ9NQX4 1742 aa8.15□□□□□ -1.11
HLA-DQA1-205ENST00000460633 SRPK2P78362 688 aaKnown RBP8.15□□□□□ -1.11
HLA-DQA1-205ENST00000460633 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.14□□□□□ -1.11
HLA-DQA1-205ENST00000460633 WDHD1O75717 1129 aaPredicted RBP8.14□□□□□ -1.11
HLA-DQA1-205ENST00000460633 NUDCQ9Y266 331 aa8.14□□□□□ -1.11
HLA-DQA1-205ENST00000460633 ADCY10Q96PN6 1610 aa8.14□□□□□ -1.11
HLA-DQA1-205ENST00000460633 SALL2Q9Y467 1007 aaPredicted RBP8.14□□□□□ -1.11
HLA-DQA1-205ENST00000460633 SHANK2Q9UPX8 1470 aa8.14□□□□□ -1.11
HLA-DQA1-205ENST00000460633 FAM135AQ9P2D6 1515 aa8.14□□□□□ -1.11
HLA-DQA1-205ENST00000460633 ROCK1Q13464 1354 aa8.13□□□□□ -1.11
HLA-DQA1-205ENST00000460633 MRS2Q9HD23 443 aa8.13□□□□□ -1.11
HLA-DQA1-205ENST00000460633 NOP58Q9Y2X3 529 aaKnown RBP8.13□□□□□ -1.11
HLA-DQA1-205ENST00000460633 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.13□□□□□ -1.11
HLA-DQA1-205ENST00000460633 CDK13Q14004 1512 aaKnown RBP8.13□□□□□ -1.11
HLA-DQA1-205ENST00000460633 HDAC5Q9UQL6 1122 aa8.13□□□□□ -1.11
HLA-DQA1-205ENST00000460633 UBE2Q2Q8WVN8 375 aa8.12□□□□□ -1.11
HLA-DQA1-205ENST00000460633 C9orf84Q5VXU9 1444 aa8.12□□□□□ -1.11
HLA-DQA1-205ENST00000460633 CWC22Q9HCG8 908 aaKnown RBP8.12□□□□□ -1.11
HLA-DQA1-205ENST00000460633 TIMELESSQ9UNS1 1208 aa8.12□□□□□ -1.11
HLA-DQA1-205ENST00000460633 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.11□□□□□ -1.11
HLA-DQA1-205ENST00000460633 WDR43Q15061 677 aaKnown RBP eCLIP8.11□□□□□ -1.11
HLA-DQA1-205ENST00000460633 CAMSAP2Q08AD1 1489 aa8.1□□□□□ -1.11
HLA-DQA1-205ENST00000460633 SETD5Q9C0A6 1442 aa8.1□□□□□ -1.11
HLA-DQA1-205ENST00000460633 ABCA9Q8IUA7 1624 aa8.1□□□□□ -1.11
HLA-DQA1-205ENST00000460633 ZFYVE16Q7Z3T8 1539 aa8.1□□□□□ -1.11
HLA-DQA1-205ENST00000460633 LAS1LQ9Y4W2 734 aaKnown RBP8.1□□□□□ -1.11
HLA-DQA1-205ENST00000460633 ARHGEF5Q12774 1597 aa8.1□□□□□ -1.11
HLA-DQA1-205ENST00000460633 DUOX2Q9NRD8 1548 aa8.1□□□□□ -1.11
HLA-DQA1-205ENST00000460633 WASHC2CQ9Y4E1 1318 aa8.09□□□□□ -1.11
HLA-DQA1-205ENST00000460633 ERBINQ96RT1 1412 aa8.09□□□□□ -1.11
HLA-DQA1-205ENST00000460633 PPP4R2Q9NY27 417 aa8.09□□□□□ -1.11
HLA-DQA1-205ENST00000460633 KDM6BO15054 1643 aa8.09□□□□□ -1.11
HLA-DQA1-205ENST00000460633 ATP10AO60312 1499 aa8.09□□□□□ -1.11
HLA-DQA1-205ENST00000460633 A0A0U1RQG5 324 aaPredicted RBP8.09□□□□□ -1.11
HLA-DQA1-205ENST00000460633 EVA1CP58658 441 aa8.09□□□□□ -1.11
HLA-DQA1-205ENST00000460633 ANP32BQ92688 251 aaKnown RBP8.09□□□□□ -1.12
HLA-DQA1-205ENST00000460633 PTPN23Q9H3S7 1636 aa8.09□□□□□ -1.12
HLA-DQA1-205ENST00000460633 HNRNPMP52272 730 aaKnown RBP eCLIP8.08□□□□□ -1.12
HLA-DQA1-205ENST00000460633 MSH5O43196 834 aa8.08□□□□□ -1.12
HLA-DQA1-205ENST00000460633 SENP3Q9H4L4 574 aaPredicted RBP8.08□□□□□ -1.12
HLA-DQA1-205ENST00000460633 UPF2Q9HAU5 1272 aaKnown RBP8.08□□□□□ -1.12
HLA-DQA1-205ENST00000460633 TCOF1Q13428 1488 aaKnown RBP8.08□□□□□ -1.12
HLA-DQA1-205ENST00000460633 TMC1Q8TDI8 760 aa8.08□□□□□ -1.12
HLA-DQA1-205ENST00000460633 ATF3P18847 181 aa8.07□□□□□ -1.12
HLA-DQA1-205ENST00000460633 PREX2Q70Z35 1606 aa8.07□□□□□ -1.12
HLA-DQA1-205ENST00000460633 KIF15Q9NS87 1388 aa8.07□□□□□ -1.12
HLA-DQA1-205ENST00000460633 RRBP1Q9P2E9 1410 aaKnown RBP8.07□□□□□ -1.12
HLA-DQA1-205ENST00000460633 KIF3BO15066 747 aa8.07□□□□□ -1.12
HLA-DQA1-205ENST00000460633 B4GALNT3Q6L9W6 998 aa8.07□□□□□ -1.12
HLA-DQA1-205ENST00000460633 DDRGK1Q96HY6 314 aa8.07□□□□□ -1.12
HLA-DQA1-205ENST00000460633 CHIC2Q9UKJ5 165 aa8.07□□□□□ -1.12
HLA-DQA1-205ENST00000460633 HDGFL2Q7Z4V5 671 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQA1-205ENST00000460633 GPATCH8Q9UKJ3 1502 aaKnown RBP8.06□□□□□ -1.12
HLA-DQA1-205ENST00000460633 WWC1Q8IX03 1113 aa8.06□□□□□ -1.12
HLA-DQA1-205ENST00000460633 DAPK1P53355 1430 aa8.06□□□□□ -1.12
HLA-DQA1-205ENST00000460633 PPP1R1BQ9UD71 204 aaPredicted RBP8.06□□□□□ -1.12
HLA-DQA1-205ENST00000460633 SENP3-EIF4A1A0A087X0R7 540 aa8.06□□□□□ -1.12
HLA-DQA1-205ENST00000460633 PPM1GO15355 546 aaPredicted RBP8.05□□□□□ -1.12
HLA-DQA1-205ENST00000460633 RRP7BPQ9NSQ0 103 aa8.05□□□□□ -1.12
HLA-DQA1-205ENST00000460633 DHX29Q7Z478 1369 aaKnown RBP8.05□□□□□ -1.12
HLA-DQA1-205ENST00000460633 MAPK8IP3Q9UPT6 1336 aa8.04□□□□□ -1.12
HLA-DQA1-205ENST00000460633 PDE4CQ08493 712 aa8.04□□□□□ -1.12
HLA-DQA1-205ENST00000460633 GGT6Q6P531 493 aa8.04□□□□□ -1.12
HLA-DQA1-205ENST00000460633 CTDP1Q9Y5B0 961 aaPredicted RBP8.04□□□□□ -1.12
HLA-DQA1-205ENST00000460633 HFM1A2PYH4 1435 aa8.04□□□□□ -1.12
HLA-DQA1-205ENST00000460633 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.04□□□□□ -1.12
HLA-DQA1-205ENST00000460633 DIP2BQ9P265 1576 aa8.03□□□□□ -1.12
HLA-DQA1-205ENST00000460633 ANKRD50Q9ULJ7 1429 aa8.03□□□□□ -1.12
HLA-DQA1-205ENST00000460633 HSP90AA1P07900 732 aaKnown RBP8.03□□□□□ -1.12
HLA-DQA1-205ENST00000460633 A2MP01023 1474 aa8.03□□□□□ -1.12
HLA-DQA1-205ENST00000460633 GTF2E1P29083 439 aaPredicted RBP8.03□□□□□ -1.12
HLA-DQA1-205ENST00000460633 ZNF710Q8N1W2 664 aa8.03□□□□□ -1.12
HLA-DQA1-205ENST00000460633 MLH3Q9UHC1 1453 aa8.03□□□□□ -1.12
HLA-DQA1-205ENST00000460633 HECW2Q9P2P5 1572 aa8.03□□□□□ -1.12
HLA-DQA1-205ENST00000460633 NUP155O75694 1391 aa8.03□□□□□ -1.12
HLA-DQA1-205ENST00000460633 HSP90B1P14625 803 aaKnown RBP8.02□□□□□ -1.12
HLA-DQA1-205ENST00000460633 RPGRIP1LQ68CZ1 1315 aa8.02□□□□□ -1.12
HLA-DQA1-205ENST00000460633 ADGBQ8N7X0 1667 aa8.02□□□□□ -1.13
HLA-DQA1-205ENST00000460633 THEMISQ8N1K5 641 aaPredicted RBP8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms