RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 KIDINS220Q9ULH0 1771 aa11.54□□□□□ -0.56
SFPQ-202ENST00000460428 L3MBTL2Q969R5 705 aa11.54□□□□□ -0.56
SFPQ-202ENST00000460428 DIP2BQ9P265 1576 aa11.52□□□□□ -0.57
SFPQ-202ENST00000460428 BCORL1Q5H9F3 1711 aa11.52□□□□□ -0.57
SFPQ-202ENST00000460428 UHRF1BP1Q6BDS2 1440 aa11.51□□□□□ -0.57
SFPQ-202ENST00000460428 PLA2R1Q13018 1463 aa11.51□□□□□ -0.57
SFPQ-202ENST00000460428 PRDM15P57071 1507 aaPredicted RBP11.5□□□□□ -0.57
SFPQ-202ENST00000460428 HECW2Q9P2P5 1572 aa11.5□□□□□ -0.57
SFPQ-202ENST00000460428 LMTK2Q8IWU2 1503 aa11.49□□□□□ -0.57
SFPQ-202ENST00000460428 PTPRTO14522 1441 aa11.48□□□□□ -0.57
SFPQ-202ENST00000460428 A2MP01023 1474 aa11.48□□□□□ -0.57
SFPQ-202ENST00000460428 MROH1Q8NDA8 1641 aa11.48□□□□□ -0.57
SFPQ-202ENST00000460428 RNF17Q9BXT8 1623 aaKnown RBP11.48□□□□□ -0.57
SFPQ-202ENST00000460428 RICTORQ6R327 1708 aa11.48□□□□□ -0.57
SFPQ-202ENST00000460428 TET3O43151 1660 aa11.47□□□□□ -0.57
SFPQ-202ENST00000460428 FRMPD1Q5SYB0 1578 aa11.46□□□□□ -0.57
SFPQ-202ENST00000460428 NEURL4Q96JN8 1562 aa11.46□□□□□ -0.57
SFPQ-202ENST00000460428 NBPF8Q3BBV2 869 aa11.46□□□□□ -0.57
SFPQ-202ENST00000460428 ZMYM4Q5VZL5 1548 aa11.45□□□□□ -0.58
SFPQ-202ENST00000460428 CCDC144AA2RUR9 1427 aa11.45□□□□□ -0.58
SFPQ-202ENST00000460428 KANK1Q14678 1352 aa11.45□□□□□ -0.58
SFPQ-202ENST00000460428 E9PCH4 1651 aa11.45□□□□□ -0.58
SFPQ-202ENST00000460428 PPRC1Q5VV67 1664 aaKnown RBP11.45□□□□□ -0.58
SFPQ-202ENST00000460428 SPATA31E1Q6ZUB1 1445 aa11.44□□□□□ -0.58
SFPQ-202ENST00000460428 TRPM2O94759 1503 aa11.44□□□□□ -0.58
SFPQ-202ENST00000460428 ABCA6Q8N139 1617 aa11.43□□□□□ -0.58
SFPQ-202ENST00000460428 FAM69CQ0P6D2 419 aa11.43□□□□□ -0.58
SFPQ-202ENST00000460428 STAC3Q96MF2 364 aa11.43□□□□□ -0.58
SFPQ-202ENST00000460428 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.43□□□□□ -0.581e-7■■■■■ 43.6
SFPQ-202ENST00000460428 DIP2CQ9Y2E4 1556 aa11.42□□□□□ -0.58
SFPQ-202ENST00000460428 KIF3BO15066 747 aa11.42□□□□□ -0.58
SFPQ-202ENST00000460428 REREQ9P2R6 1566 aa11.41□□□□□ -0.58
SFPQ-202ENST00000460428 RALGAPBQ86X10 1494 aa11.41□□□□□ -0.58
SFPQ-202ENST00000460428 EIF4G2P78344 907 aaKnown RBP eCLIP11.41□□□□□ -0.58
SFPQ-202ENST00000460428 SPHKAPQ2M3C7 1700 aa11.4□□□□□ -0.58
SFPQ-202ENST00000460428 EFCAB6Q5THR3 1501 aa11.4□□□□□ -0.58
SFPQ-202ENST00000460428 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.58
SFPQ-202ENST00000460428 RAPGEF3O95398 923 aa11.4□□□□□ -0.58
SFPQ-202ENST00000460428 MIER1Q8N108 512 aa11.39□□□□□ -0.59
SFPQ-202ENST00000460428 HSPA5P11021 654 aaKnown RBP11.38□□□□□ -0.59
SFPQ-202ENST00000460428 CEP152O94986 1710 aa11.38□□□□□ -0.59
SFPQ-202ENST00000460428 PRAG1Q86YV5 1406 aa11.37□□□□□ -0.59
SFPQ-202ENST00000460428 MYT1LQ9UL68 1186 aa11.37□□□□□ -0.59
SFPQ-202ENST00000460428 GPRASP1Q5JY77 1395 aa11.37□□□□□ -0.59
SFPQ-202ENST00000460428 ARHGAP31Q2M1Z3 1444 aa11.36□□□□□ -0.59
SFPQ-202ENST00000460428 ABCC3O15438 1527 aa11.36□□□□□ -0.59
SFPQ-202ENST00000460428 AGLP35573 1532 aa11.36□□□□□ -0.59
SFPQ-202ENST00000460428 LAMC1P11047 1609 aa11.36□□□□□ -0.59
SFPQ-202ENST00000460428 ZC3H13Q5T200 1668 aaKnown RBP11.36□□□□□ -0.59
SFPQ-202ENST00000460428 YEATS2Q9ULM3 1422 aa11.35□□□□□ -0.59
SFPQ-202ENST00000460428 CLTCL1P53675 1640 aa11.35□□□□□ -0.59
SFPQ-202ENST00000460428 TRPM1Q7Z4N2 1603 aa11.35□□□□□ -0.59
SFPQ-202ENST00000460428 DCAF11Q8TEB1 546 aa11.35□□□□□ -0.59
SFPQ-202ENST00000460428 PPP6R1Q9UPN7 881 aa11.35□□□□□ -0.59
SFPQ-202ENST00000460428 POLR1AO95602 1720 aaPredicted RBP11.35□□□□□ -0.59
SFPQ-202ENST00000460428 ARID4BQ4LE39 1312 aaPredicted RBP11.35□□□□□ -0.59
SFPQ-202ENST00000460428 NOS1P29475 1434 aa11.33□□□□□ -0.6
SFPQ-202ENST00000460428 NPATQ14207 1427 aa11.33□□□□□ -0.6
SFPQ-202ENST00000460428 CNTLNQ9NXG0 1405 aa11.33□□□□□ -0.6
SFPQ-202ENST00000460428 WASHC2AQ641Q2 1341 aa11.33□□□□□ -0.6
SFPQ-202ENST00000460428 DDX10Q13206 875 aaKnown RBP11.32□□□□□ -0.6
SFPQ-202ENST00000460428 HIRIP3Q9BW71 556 aaPredicted RBP11.32□□□□□ -0.6
SFPQ-202ENST00000460428 TSPOAP1O95153 1857 aa11.32□□□□□ -0.6
SFPQ-202ENST00000460428 COL17A1Q9UMD9 1497 aaPredicted RBP11.32□□□□□ -0.6
SFPQ-202ENST00000460428 CAMSAP1Q5T5Y3 1602 aa11.31□□□□□ -0.6
SFPQ-202ENST00000460428 USP47Q96K76 1375 aa11.31□□□□□ -0.6
SFPQ-202ENST00000460428 CCDC7Q96M83 1385 aa11.3□□□□□ -0.6
SFPQ-202ENST00000460428 MYOM2P54296 1465 aa11.3□□□□□ -0.6
SFPQ-202ENST00000460428 WASHC2CQ9Y4E1 1318 aa11.3□□□□□ -0.6
SFPQ-202ENST00000460428 KIAA1210Q9ULL0 1709 aa11.29□□□□□ -0.6
SFPQ-202ENST00000460428 PIK3C2BO00750 1634 aa11.29□□□□□ -0.6
SFPQ-202ENST00000460428 MADDQ8WXG6 1647 aa11.29□□□□□ -0.6
SFPQ-202ENST00000460428 C11orf95C9JLR9 678 aaPredicted RBP11.29□□□□□ -0.6
SFPQ-202ENST00000460428 GGT6Q6P531 493 aa11.29□□□□□ -0.6
SFPQ-202ENST00000460428 KIF1BO60333 1816 aa11.29□□□□□ -0.6
SFPQ-202ENST00000460428 ADGRB3O60242 1522 aa11.29□□□□□ -0.6
SFPQ-202ENST00000460428 NRXN1Q9ULB1 1477 aa11.28□□□□□ -0.6
SFPQ-202ENST00000460428 RGL3Q3MIN7 710 aa11.28□□□□□ -0.6
SFPQ-202ENST00000460428 CARD11Q9BXL7 1154 aa11.28□□□□□ -0.6
SFPQ-202ENST00000460428 KDM2AQ9Y2K7 1162 aa11.28□□□□□ -0.6
SFPQ-202ENST00000460428 IFT172Q9UG01 1749 aa11.28□□□□□ -0.6
SFPQ-202ENST00000460428 ARHGEF40Q8TER5 1519 aa11.28□□□□□ -0.6
SFPQ-202ENST00000460428 CCER2I3L3R5 266 aa11.27□□□□□ -0.61
SFPQ-202ENST00000460428 RPGRIP1LQ68CZ1 1315 aa11.27□□□□□ -0.61
SFPQ-202ENST00000460428 ROCK2O75116 1388 aaKnown RBP11.27□□□□□ -0.61
SFPQ-202ENST00000460428 SIGLEC1Q9BZZ2 1709 aa11.26□□□□□ -0.61
SFPQ-202ENST00000460428 KIF7Q2M1P5 1343 aa11.26□□□□□ -0.61
SFPQ-202ENST00000460428 ZNF326Q5BKZ1 582 aaKnown RBP11.25□□□□□ -0.61
SFPQ-202ENST00000460428 SLC52A1Q9NWF4 448 aa11.25□□□□□ -0.61
SFPQ-202ENST00000460428 SYNMO15061 1565 aa11.24□□□□□ -0.61
SFPQ-202ENST00000460428 UGGT1Q9NYU2 1555 aa11.24□□□□□ -0.61
SFPQ-202ENST00000460428 NBPF1Q3BBV0 1214 aa11.23□□□□□ -0.61
SFPQ-202ENST00000460428 MROH2AA6NES4 1674 aa11.23□□□□□ -0.61
SFPQ-202ENST00000460428 ST20-MTHFSA0A0A6YYL1 179 aa11.22□□□□□ -0.61
SFPQ-202ENST00000460428 ANP32CO43423 234 aa11.22□□□□□ -0.61
SFPQ-202ENST00000460428 ZFYVE9O95405 1425 aa11.22□□□□□ -0.61
SFPQ-202ENST00000460428 IQGAP1P46940 1657 aa11.22□□□□□ -0.61
SFPQ-202ENST00000460428 PREX1Q8TCU6 1659 aa11.22□□□□□ -0.61
SFPQ-202ENST00000460428 PPLO60437 1756 aa11.21□□□□□ -0.61
SFPQ-202ENST00000460428 SETBP1Q9Y6X0 1596 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms