RNA–Protein interactions for RNA: ENST00000460204.1

ITGB8-202, Transcript of integrin subunit beta 8, humanhuman

TSL 1 (best)

Gene ITGB8, Length 1,090 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB8-202ENST00000460204 ARID3CA6NKF2 412 aa11.42□□□□□ -0.58
ITGB8-202ENST00000460204 HECW1Q76N89 1606 aa11.42□□□□□ -0.58
ITGB8-202ENST00000460204 MIER1Q8N108 512 aa11.4□□□□□ -0.58
ITGB8-202ENST00000460204 MED1Q15648 1581 aaPredicted RBP11.4□□□□□ -0.58
ITGB8-202ENST00000460204 MLECQ14165 292 aa11.39□□□□□ -0.59
ITGB8-202ENST00000460204 C3P01024 1663 aa11.38□□□□□ -0.59
ITGB8-202ENST00000460204 C9orf84Q5VXU9 1444 aa11.37□□□□□ -0.59
ITGB8-202ENST00000460204 FAM9AQ8IZU1 332 aaPredicted RBP11.37□□□□□ -0.59
ITGB8-202ENST00000460204 SAMD9Q5K651 1589 aa11.37□□□□□ -0.59
ITGB8-202ENST00000460204 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.36□□□□□ -0.59
ITGB8-202ENST00000460204 FBXO3Q9UK99 471 aa11.36□□□□□ -0.59
ITGB8-202ENST00000460204 ASTLQ6HA08 431 aaPredicted RBP11.35□□□□□ -0.59
ITGB8-202ENST00000460204 TSPYL2Q9H2G4 693 aaPredicted RBP11.35□□□□□ -0.59
ITGB8-202ENST00000460204 ATP10AO60312 1499 aa11.34□□□□□ -0.59
ITGB8-202ENST00000460204 NUP153P49790 1475 aaKnown RBP11.34□□□□□ -0.59
ITGB8-202ENST00000460204 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
ITGB8-202ENST00000460204 SPNS2Q8IVW8 549 aa11.34□□□□□ -0.59
ITGB8-202ENST00000460204 NCOA1Q15788 1441 aa11.34□□□□□ -0.59
ITGB8-202ENST00000460204 CEBPAP49715 358 aaPredicted RBP11.33□□□□□ -0.6
ITGB8-202ENST00000460204 PLCD3Q8N3E9 789 aa11.33□□□□□ -0.6
ITGB8-202ENST00000460204 CCDC61Q9Y6R9 512 aa11.32□□□□□ -0.6
ITGB8-202ENST00000460204 REREQ9P2R6 1566 aa11.3□□□□□ -0.6
ITGB8-202ENST00000460204 RASEFQ8IZ41 740 aa11.3□□□□□ -0.6
ITGB8-202ENST00000460204 MS4A3Q96HJ5 214 aa11.3□□□□□ -0.6
ITGB8-202ENST00000460204 MYO5CQ9NQX4 1742 aa11.29□□□□□ -0.6
ITGB8-202ENST00000460204 CAMSAP1Q5T5Y3 1602 aa11.29□□□□□ -0.6
ITGB8-202ENST00000460204 UBAP1LF5GYI3 381 aa11.29□□□□□ -0.6
ITGB8-202ENST00000460204 PRXQ9BXM0 1461 aa11.29□□□□□ -0.6
ITGB8-202ENST00000460204 SUPT6HQ7KZ85 1726 aaKnown RBP11.29□□□□□ -0.6
ITGB8-202ENST00000460204 SCAPERQ9BY12 1400 aa11.28□□□□□ -0.6
ITGB8-202ENST00000460204 KDM5CP41229 1560 aa11.28□□□□□ -0.6
ITGB8-202ENST00000460204 DIP2CQ9Y2E4 1556 aa11.28□□□□□ -0.6
ITGB8-202ENST00000460204 ATMINO43313 823 aaPredicted RBP11.27□□□□□ -0.61
ITGB8-202ENST00000460204 P3H3Q8IVL6 736 aa11.27□□□□□ -0.61
ITGB8-202ENST00000460204 ZNF142P52746 1687 aaPredicted RBP11.27□□□□□ -0.61
ITGB8-202ENST00000460204 MROH2AA6NES4 1674 aa11.26□□□□□ -0.61
ITGB8-202ENST00000460204 TRAPPC8Q9Y2L5 1435 aa11.26□□□□□ -0.61
ITGB8-202ENST00000460204 ZNF518AQ6AHZ1 1483 aa11.25□□□□□ -0.61
ITGB8-202ENST00000460204 ABCA6Q8N139 1617 aa11.25□□□□□ -0.61
ITGB8-202ENST00000460204 VASPP50552 380 aaPredicted RBP11.25□□□□□ -0.61
ITGB8-202ENST00000460204 AGLP35573 1532 aa11.25□□□□□ -0.61
ITGB8-202ENST00000460204 PLEKHD1A6NEE1 506 aa11.24□□□□□ -0.61
ITGB8-202ENST00000460204 ZNF335Q9H4Z2 1342 aaPredicted RBP11.24□□□□□ -0.61
ITGB8-202ENST00000460204 PLCH2O75038 1416 aa11.24□□□□□ -0.61
ITGB8-202ENST00000460204 NUBP1P53384 320 aa11.23□□□□□ -0.61
ITGB8-202ENST00000460204 MYO3AQ8NEV4 1616 aa11.23□□□□□ -0.61
ITGB8-202ENST00000460204 KIF12Q96FN5 646 aa11.22□□□□□ -0.61
ITGB8-202ENST00000460204 ZBTB47Q9UFB7 747 aaPredicted RBP11.22□□□□□ -0.61
ITGB8-202ENST00000460204 PLA2R1Q13018 1463 aa11.21□□□□□ -0.61
ITGB8-202ENST00000460204 CNTLNQ9NXG0 1405 aa11.21□□□□□ -0.61
ITGB8-202ENST00000460204 NPATQ14207 1427 aa11.2□□□□□ -0.62
ITGB8-202ENST00000460204 HSPA1LP34931 641 aa11.2□□□□□ -0.62
ITGB8-202ENST00000460204 CEP170BQ9Y4F5 1589 aaPredicted RBP11.19□□□□□ -0.62
ITGB8-202ENST00000460204 CDK13Q14004 1512 aaKnown RBP11.19□□□□□ -0.62
ITGB8-202ENST00000460204 TCOF1Q13428 1488 aaKnown RBP11.19□□□□□ -0.62
ITGB8-202ENST00000460204 POLR1AO95602 1720 aaPredicted RBP11.18□□□□□ -0.62
ITGB8-202ENST00000460204 ESF1Q9H501 851 aaKnown RBP11.18□□□□□ -0.62
ITGB8-202ENST00000460204 CPS1P31327 1500 aa11.17□□□□□ -0.62
ITGB8-202ENST00000460204 KIF14Q15058 1648 aa11.17□□□□□ -0.62
ITGB8-202ENST00000460204 ARHGAP5Q13017 1502 aa11.16□□□□□ -0.62
ITGB8-202ENST00000460204 MAP3K13O43283 966 aa11.16□□□□□ -0.62
ITGB8-202ENST00000460204 MLH3Q9UHC1 1453 aa11.16□□□□□ -0.62
ITGB8-202ENST00000460204 NCKAP5LQ9HCH0 1330 aa11.15□□□□□ -0.62
ITGB8-202ENST00000460204 ITSN2Q9NZM3 1697 aa11.15□□□□□ -0.62
ITGB8-202ENST00000460204 KIDINS220Q9ULH0 1771 aa11.14□□□□□ -0.63
ITGB8-202ENST00000460204 PIP4K2BP78356 416 aa11.14□□□□□ -0.63
ITGB8-202ENST00000460204 PKD2Q13563 968 aa11.14□□□□□ -0.63
ITGB8-202ENST00000460204 EFCAB2Q5VUJ9 269 aa11.14□□□□□ -0.63
ITGB8-202ENST00000460204 TRPC6Q9Y210 931 aa11.14□□□□□ -0.63
ITGB8-202ENST00000460204 CLTCQ00610 1675 aaKnown RBP11.14□□□□□ -0.63
ITGB8-202ENST00000460204 CDC42BPBQ9Y5S2 1711 aa11.13□□□□□ -0.63
ITGB8-202ENST00000460204 ST18O60284 1047 aa11.13□□□□□ -0.63
ITGB8-202ENST00000460204 TOM1O60784 492 aa11.13□□□□□ -0.63
ITGB8-202ENST00000460204 IFNLR1Q8IU57 520 aaPredicted RBP11.13□□□□□ -0.63
ITGB8-202ENST00000460204 ALKQ9UM73 1620 aa11.13□□□□□ -0.63
ITGB8-202ENST00000460204 MYT1LQ9UL68 1186 aa11.12□□□□□ -0.63
ITGB8-202ENST00000460204 ABCC1P33527 1531 aa11.12□□□□□ -0.63
ITGB8-202ENST00000460204 PREX2Q70Z35 1606 aa11.11□□□□□ -0.63
ITGB8-202ENST00000460204 AFAP1Q8N556 730 aa11.11□□□□□ -0.63
ITGB8-202ENST00000460204 FAM212AQ96EL1 285 aa11.11□□□□□ -0.63
ITGB8-202ENST00000460204 PTPRKQ15262 1439 aa11.1□□□□□ -0.63
ITGB8-202ENST00000460204 NEURL4Q96JN8 1562 aa11.1□□□□□ -0.63
ITGB8-202ENST00000460204 ATN1P54259 1190 aaPredicted RBP11.09□□□□□ -0.63
ITGB8-202ENST00000460204 BMP2KQ9NSY1 1161 aaPredicted RBP11.09□□□□□ -0.63
ITGB8-202ENST00000460204 DNMT1P26358 1616 aaKnown RBP11.09□□□□□ -0.63
ITGB8-202ENST00000460204 RNF17Q9BXT8 1623 aaKnown RBP11.09□□□□□ -0.63
ITGB8-202ENST00000460204 SHANK2Q9UPX8 1470 aa11.08□□□□□ -0.64
ITGB8-202ENST00000460204 ZMYM3Q14202 1370 aa11.08□□□□□ -0.64
ITGB8-202ENST00000460204 SYNMO15061 1565 aa11.07□□□□□ -0.64
ITGB8-202ENST00000460204 VWDEQ8N2E2 1590 aa11.07□□□□□ -0.64
ITGB8-202ENST00000460204 SETD1AO15047 1707 aaKnown RBP11.06□□□□□ -0.64
ITGB8-202ENST00000460204 POTEFA5A3E0 1075 aa11.06□□□□□ -0.64
ITGB8-202ENST00000460204 TIE1P35590 1138 aa11.06□□□□□ -0.64
ITGB8-202ENST00000460204 SGIP1Q9BQI5 828 aa11.06□□□□□ -0.64
ITGB8-202ENST00000460204 PLXNC1O60486 1568 aa11.06□□□□□ -0.64
ITGB8-202ENST00000460204 A2ML1A8K2U0 1454 aa11.06□□□□□ -0.64
ITGB8-202ENST00000460204 CLIP1P30622 1438 aa11.05□□□□□ -0.64
ITGB8-202ENST00000460204 PCDHB13Q9Y5F0 798 aa11.05□□□□□ -0.64
ITGB8-202ENST00000460204 TROQ12816 1431 aaPredicted RBP11.04□□□□□ -0.64
ITGB8-202ENST00000460204 LRRIQ1Q96JM4 1722 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms