RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 ERBB3P21860 1342 aa14.23□□□□□ -0.13
CKAP2-204ENST00000459902 FCHSD2O94868 740 aa14.23□□□□□ -0.13
CKAP2-204ENST00000459902 EMP3P54852 163 aa14.23□□□□□ -0.13
CKAP2-204ENST00000459902 LCE2DQ5TA82 110 aaPredicted RBP14.23□□□□□ -0.13
CKAP2-204ENST00000459902 VARS2Q5ST30 1063 aaKnown RBP14.2□□□□□ -0.14
CKAP2-204ENST00000459902 BCL2L12Q9HB09 334 aa14.2□□□□□ -0.14
CKAP2-204ENST00000459902 GNPATO15228 680 aa14.19□□□□□ -0.14
CKAP2-204ENST00000459902 HIC1Q14526 733 aa14.19□□□□□ -0.14
CKAP2-204ENST00000459902 SLC24A3Q9HC58 644 aa14.18□□□□□ -0.14
CKAP2-204ENST00000459902 FAM205CA6NFA0 338 aa14.17□□□□□ -0.14
CKAP2-204ENST00000459902 FECHP22830 423 aa14.17□□□□□ -0.14
CKAP2-204ENST00000459902 KRI1Q8N9T8 703 aaKnown RBP14.16□□□□□ -0.14
CKAP2-204ENST00000459902 PTPREP23469 700 aa14.14□□□□□ -0.15
CKAP2-204ENST00000459902 CERKQ8TCT0 537 aa14.14□□□□□ -0.15
CKAP2-204ENST00000459902 POTEB3A0JP26 581 aa14.13□□□□□ -0.15
CKAP2-204ENST00000459902 COL9A1P20849 921 aa14.13□□□□□ -0.15
CKAP2-204ENST00000459902 POTEBQ6S5H4 581 aa14.13□□□□□ -0.15
CKAP2-204ENST00000459902 MAP2K5Q13163 448 aa14.1□□□□□ -0.15
CKAP2-204ENST00000459902 POTEEQ6S8J3 1075 aa14.1□□□□□ -0.15
CKAP2-204ENST00000459902 HS3ST6Q96QI5 342 aa14.1□□□□□ -0.15
CKAP2-204ENST00000459902 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
CKAP2-204ENST00000459902 KCNK17Q96T54 332 aa14.09□□□□□ -0.15
CKAP2-204ENST00000459902 PPP1R3GB7ZBB8 358 aa14.08□□□□□ -0.16
CKAP2-204ENST00000459902 ZNF687Q8N1G0 1237 aa14.08□□□□□ -0.16
CKAP2-204ENST00000459902 IRF6O14896 467 aa14.07□□□□□ -0.16
CKAP2-204ENST00000459902 PSEN2P49810 448 aa14.07□□□□□ -0.16
CKAP2-204ENST00000459902 AK7Q96M32 723 aa14.07□□□□□ -0.16
CKAP2-204ENST00000459902 PRSS12P56730 875 aa14.06□□□□□ -0.16
CKAP2-204ENST00000459902 CDCA7LQ96GN5 454 aa14.06□□□□□ -0.16
CKAP2-204ENST00000459902 AXIN2Q9Y2T1 843 aa14.06□□□□□ -0.16
CKAP2-204ENST00000459902 ARHGAP33O14559 1287 aa14.05□□□□□ -0.16
CKAP2-204ENST00000459902 PADI6Q6TGC4 694 aa14.05□□□□□ -0.16
CKAP2-204ENST00000459902 TTC13Q8NBP0 860 aa14.05□□□□□ -0.16
CKAP2-204ENST00000459902 RBM27Q9P2N5 1060 aaKnown RBP14.04□□□□□ -0.16
CKAP2-204ENST00000459902 CCDC102AQ96A19 550 aa14.03□□□□□ -0.16
CKAP2-204ENST00000459902 KCNH8Q96L42 1107 aa14.03□□□□□ -0.16
CKAP2-204ENST00000459902 FAM198AQ9UFP1 575 aa14.02□□□□□ -0.17
CKAP2-204ENST00000459902 TRIM66O15016 1216 aa14□□□□□ -0.17
CKAP2-204ENST00000459902 PBX2P40425 430 aa14□□□□□ -0.17
CKAP2-204ENST00000459902 FAM161AQ3B820 660 aa14□□□□□ -0.17
CKAP2-204ENST00000459902 DMRTA1Q5VZB9 504 aa14□□□□□ -0.17
CKAP2-204ENST00000459902 TSKSQ9UJT2 592 aa14□□□□□ -0.17
CKAP2-204ENST00000459902 PROX2Q3B8N5 592 aa13.99□□□□□ -0.17
CKAP2-204ENST00000459902 ZBED2Q9BTP6 218 aa13.99□□□□□ -0.17
CKAP2-204ENST00000459902 TRIM6-TRIM34B2RNG4 842 aa13.97□□□□□ -0.17
CKAP2-204ENST00000459902 ADGRG1Q9Y653 693 aa13.96□□□□□ -0.17
CKAP2-204ENST00000459902 C3orf80F5H4A9 247 aa13.93□□□□□ -0.18
CKAP2-204ENST00000459902 ONECUT3O60422 494 aaPredicted RBP13.93□□□□□ -0.18
CKAP2-204ENST00000459902 BRPF1P55201 1214 aaPredicted RBP13.93□□□□□ -0.18
CKAP2-204ENST00000459902 SLC4A5Q9BY07 1137 aa13.93□□□□□ -0.18
CKAP2-204ENST00000459902 OATP04181 439 aa13.92□□□□□ -0.18
CKAP2-204ENST00000459902 PDE4DQ08499 809 aa13.92□□□□□ -0.18
CKAP2-204ENST00000459902 PHOX2BQ99453 314 aa13.92□□□□□ -0.18
CKAP2-204ENST00000459902 METTL3Q86U44 580 aaKnown RBP13.91□□□□□ -0.18
CKAP2-204ENST00000459902 PACS2Q86VP3 889 aa13.91□□□□□ -0.18
CKAP2-204ENST00000459902 KIAA1468Q9P260 1216 aa13.91□□□□□ -0.18
CKAP2-204ENST00000459902 PXYLP1Q8TE99 480 aa13.9□□□□□ -0.18
CKAP2-204ENST00000459902 AMHR2Q16671 573 aa13.89□□□□□ -0.19
CKAP2-204ENST00000459902 NUDT18Q6ZVK8 323 aa13.89□□□□□ -0.19
CKAP2-204ENST00000459902 TATDN2Q93075 761 aa13.89□□□□□ -0.19
CKAP2-204ENST00000459902 VPS9D1Q9Y2B5 631 aa13.89□□□□□ -0.19
CKAP2-204ENST00000459902 NEUROD2Q15784 382 aa13.88□□□□□ -0.19
CKAP2-204ENST00000459902 RBM46Q8TBY0 533 aaKnown RBP13.88□□□□□ -0.19
CKAP2-204ENST00000459902 EYA1Q99502 592 aa13.88□□□□□ -0.19
CKAP2-204ENST00000459902 PNMA3Q9UL41 463 aa13.88□□□□□ -0.19
CKAP2-204ENST00000459902 RABGEF1Q9UJ41 708 aa13.87□□□□□ -0.19
CKAP2-204ENST00000459902 NBPF26B4DH59 902 aa13.86□□□□□ -0.19
CKAP2-204ENST00000459902 SMAPO00193 183 aa13.86□□□□□ -0.19
CKAP2-204ENST00000459902 LSM11P83369 360 aaKnown RBP eCLIP13.86□□□□□ -0.19
CKAP2-204ENST00000459902 POTEGQ6S5H5 508 aa13.85□□□□□ -0.19
CKAP2-204ENST00000459902 GPBP1L1Q9HC44 474 aaPredicted RBP13.85□□□□□ -0.19
CKAP2-204ENST00000459902 TK2O00142 265 aa13.84□□□□□ -0.19
CKAP2-204ENST00000459902 NLRP7Q8WX94 980 aa13.84□□□□□ -0.19
CKAP2-204ENST00000459902 POTEMA6NI47 508 aa13.82□□□□□ -0.2
CKAP2-204ENST00000459902 PARP9Q8IXQ6 854 aa13.82□□□□□ -0.2
CKAP2-204ENST00000459902 RCCD1A6NED2 376 aa13.81□□□□□ -0.2
CKAP2-204ENST00000459902 MDM2Q00987 491 aaPredicted RBP13.81□□□□□ -0.2
CKAP2-204ENST00000459902 ADGRD1Q6QNK2 874 aa13.81□□□□□ -0.2
CKAP2-204ENST00000459902 ANKRD13DQ6ZTN6 518 aa13.81□□□□□ -0.2
CKAP2-204ENST00000459902 REPIN1Q9BWE0 567 aaKnown RBP13.81□□□□□ -0.2
CKAP2-204ENST00000459902 KRTAP3-3Q9BYR6 98 aa13.81□□□□□ -0.2
CKAP2-204ENST00000459902 KRTAP3-2Q9BYR7 98 aa13.81□□□□□ -0.2
CKAP2-204ENST00000459902 BHMG1C9JSJ3 638 aaPredicted RBP13.8□□□□□ -0.2
CKAP2-204ENST00000459902 TTLL12Q14166 644 aaPredicted RBP13.8□□□□□ -0.2
CKAP2-204ENST00000459902 TMUB1Q9BVT8 246 aa13.8□□□□□ -0.2
CKAP2-204ENST00000459902 KDM4CQ9H3R0 1056 aa13.8□□□□□ -0.2
CKAP2-204ENST00000459902 SEPT9Q9UHD8 586 aaPredicted RBP13.8□□□□□ -0.2
CKAP2-204ENST00000459902 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.78□□□□□ -0.2
CKAP2-204ENST00000459902 CLCN1P35523 988 aa13.77□□□□□ -0.21
CKAP2-204ENST00000459902 GPCPD1Q9NPB8 672 aa13.77□□□□□ -0.21
CKAP2-204ENST00000459902 HRO43593 1189 aa13.76□□□□□ -0.21
CKAP2-204ENST00000459902 DNAJB2P25686 324 aa13.76□□□□□ -0.21
CKAP2-204ENST00000459902 CDAN1Q8IWY9 1227 aa13.76□□□□□ -0.21
CKAP2-204ENST00000459902 GIGYF2Q6Y7W6 1299 aaKnown RBP13.75□□□□□ -0.21
CKAP2-204ENST00000459902 NBPF3Q9H094 633 aa13.74□□□□□ -0.21
CKAP2-204ENST00000459902 FAM98CQ17RN3 349 aaKnown RBP13.73□□□□□ -0.21
CKAP2-204ENST00000459902 TMEM134Q9H6X4 195 aa13.73□□□□□ -0.21
CKAP2-204ENST00000459902 LAPTM4BQ86VI4 370 aa13.72□□□□□ -0.21
CKAP2-204ENST00000459902 DAXXQ9UER7 740 aaPredicted RBP13.72□□□□□ -0.21
CKAP2-204ENST00000459902 MRPL50Q8N5N7 158 aaKnown RBP13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms