RNA–Protein interactions for RNA: ENST00000459737.5

KTN1-208, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 4,793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-208ENST00000459737 FAM135AQ9P2D6 1515 aa3.88□□□□□ -1.79
KTN1-208ENST00000459737 SPATA31D1Q6ZQQ2 1576 aa3.88□□□□□ -1.79
KTN1-208ENST00000459737 FAM9AQ8IZU1 332 aaPredicted RBP3.88□□□□□ -1.79
KTN1-208ENST00000459737 TCOF1Q13428 1488 aaKnown RBP3.88□□□□□ -1.79
KTN1-208ENST00000459737 MYOM1P52179 1685 aa3.87□□□□□ -1.79
KTN1-208ENST00000459737 DIEXFQ68CQ4 756 aaKnown RBP3.87□□□□□ -1.79
KTN1-208ENST00000459737 NHSL1Q5SYE7 1610 aa3.87□□□□□ -1.79
KTN1-208ENST00000459737 SPHKAPQ2M3C7 1700 aa3.86□□□□□ -1.79
KTN1-208ENST00000459737 PRAG1Q86YV5 1406 aa3.86□□□□□ -1.79
KTN1-208ENST00000459737 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.86□□□□□ -1.79
KTN1-208ENST00000459737 PPLO60437 1756 aa3.86□□□□□ -1.79
KTN1-208ENST00000459737 KIF1AQ12756 1690 aa3.85□□□□□ -1.79
KTN1-208ENST00000459737 KNDC1Q76NI1 1749 aa3.85□□□□□ -1.79
KTN1-208ENST00000459737 NEO1Q92859 1461 aa3.85□□□□□ -1.79
KTN1-208ENST00000459737 COL22A1Q8NFW1 1626 aaPredicted RBP3.85□□□□□ -1.79
KTN1-208ENST00000459737 IQGAP1P46940 1657 aa3.85□□□□□ -1.79
KTN1-208ENST00000459737 CDK13Q14004 1512 aaKnown RBP3.85□□□□□ -1.79
KTN1-208ENST00000459737 SHANK3Q9BYB0 1731 aa3.84□□□□□ -1.79
KTN1-208ENST00000459737 UACAQ9BZF9 1416 aa3.84□□□□□ -1.79
KTN1-208ENST00000459737 CLSPNQ9HAW4 1339 aa3.84□□□□□ -1.79
KTN1-208ENST00000459737 LMTK2Q8IWU2 1503 aa3.84□□□□□ -1.79
KTN1-208ENST00000459737 ZNF316A6NFI3 1004 aaPredicted RBP3.84□□□□□ -1.79
KTN1-208ENST00000459737 NALCNQ8IZF0 1738 aa3.84□□□□□ -1.79
KTN1-208ENST00000459737 MED14O60244 1454 aa3.84□□□□□ -1.79
KTN1-208ENST00000459737 MLH3Q9UHC1 1453 aa3.84□□□□□ -1.79
KTN1-208ENST00000459737 USP32Q8NFA0 1604 aa3.84□□□□□ -1.8
KTN1-208ENST00000459737 OSCARQ8IYS5 282 aa3.84□□□□□ -1.8
KTN1-208ENST00000459737 TOPAZ1Q8N9V7 1692 aa3.83□□□□□ -1.8
KTN1-208ENST00000459737 TRPM3Q9HCF6 1732 aaPredicted RBP3.83□□□□□ -1.8
KTN1-208ENST00000459737 HTTP42858 3142 aa3.83□□□□□ -1.8
KTN1-208ENST00000459737 FYCO1Q9BQS8 1478 aa3.83□□□□□ -1.8
KTN1-208ENST00000459737 NRAPQ86VF7 1730 aa3.82□□□□□ -1.8
KTN1-208ENST00000459737 CSRNP3Q8WYN3 585 aa3.82□□□□□ -1.8
KTN1-208ENST00000459737 RGPD8O14715 1765 aaPredicted RBP3.82□□□□□ -1.8
KTN1-208ENST00000459737 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.82□□□□□ -1.8
KTN1-208ENST00000459737 NAIPQ13075 1403 aa3.82□□□□□ -1.8
KTN1-208ENST00000459737 SHPRHQ149N8 1683 aa3.82□□□□□ -1.8
KTN1-208ENST00000459737 SETD1BQ9UPS6 1966 aaKnown RBP3.82□□□□□ -1.8
KTN1-208ENST00000459737 TRPM1Q7Z4N2 1603 aa3.82□□□□□ -1.8
KTN1-208ENST00000459737 PTPRMP28827 1452 aa3.81□□□□□ -1.8
KTN1-208ENST00000459737 TUBGCP6Q96RT7 1819 aa3.81□□□□□ -1.8
KTN1-208ENST00000459737 RAB3GAP2Q9H2M9 1393 aa3.81□□□□□ -1.8
KTN1-208ENST00000459737 MYOM3Q5VTT5 1437 aa3.81□□□□□ -1.8
KTN1-208ENST00000459737 RNF123Q5XPI4 1314 aa3.81□□□□□ -1.8
KTN1-208ENST00000459737 PRUNE2Q8WUY3 3088 aa3.81□□□□□ -1.8
KTN1-208ENST00000459737 ARHGAP23Q9P227 1491 aa3.81□□□□□ -1.8
KTN1-208ENST00000459737 HFM1A2PYH4 1435 aa3.81□□□□□ -1.8
KTN1-208ENST00000459737 DMDP11532 3685 aa3.81□□□□□ -1.8
KTN1-208ENST00000459737 POGZQ7Z3K3 1410 aa3.81□□□□□ -1.8
KTN1-208ENST00000459737 COL16A1Q07092 1604 aaPredicted RBP3.8□□□□□ -1.8
KTN1-208ENST00000459737 IQSEC2Q5JU85 1478 aa3.8□□□□□ -1.8
KTN1-208ENST00000459737 SLIT1O75093 1534 aa3.8□□□□□ -1.8
KTN1-208ENST00000459737 DHX29Q7Z478 1369 aaKnown RBP3.8□□□□□ -1.8
KTN1-208ENST00000459737 ANKRD26Q9UPS8 1709 aa3.8□□□□□ -1.8
KTN1-208ENST00000459737 SBF2Q86WG5 1849 aa3.79□□□□□ -1.8
KTN1-208ENST00000459737 AKNAQ7Z591 1439 aa3.79□□□□□ -1.8
KTN1-208ENST00000459737 PEAK1Q9H792 1746 aa3.79□□□□□ -1.8
KTN1-208ENST00000459737 AHDC1Q5TGY3 1603 aaPredicted RBP3.79□□□□□ -1.8
KTN1-208ENST00000459737 USP34Q70CQ2 3546 aa3.79□□□□□ -1.8
KTN1-208ENST00000459737 TNS1Q9HBL0 1735 aaKnown RBP3.79□□□□□ -1.8
KTN1-208ENST00000459737 BRWD3Q6RI45 1802 aa3.79□□□□□ -1.8
KTN1-208ENST00000459737 PZPP20742 1482 aa3.79□□□□□ -1.8
KTN1-208ENST00000459737 YEATS2Q9ULM3 1422 aa3.79□□□□□ -1.8
KTN1-208ENST00000459737 CASKIN1Q8WXD9 1431 aa3.78□□□□□ -1.8
KTN1-208ENST00000459737 RNF39Q9H2S5 420 aa3.78□□□□□ -1.8
KTN1-208ENST00000459737 CASZ1Q86V15 1759 aa3.78□□□□□ -1.8
KTN1-208ENST00000459737 NCOA1Q15788 1441 aa3.78□□□□□ -1.8
KTN1-208ENST00000459737 NRKQ7Z2Y5 1582 aa3.78□□□□□ -1.8
KTN1-208ENST00000459737 CCNB3Q8WWL7 1395 aa3.78□□□□□ -1.8
KTN1-208ENST00000459737 MKI67P46013 3256 aaKnown RBP3.78□□□□□ -1.8
KTN1-208ENST00000459737 GPATCH8Q9UKJ3 1502 aaKnown RBP3.78□□□□□ -1.8
KTN1-208ENST00000459737 ALS2Q96Q42 1657 aa3.78□□□□□ -1.8
KTN1-208ENST00000459737 KIAA1551Q9HCM1 1747 aa3.78□□□□□ -1.81
KTN1-208ENST00000459737 ASXL1Q8IXJ9 1541 aa3.78□□□□□ -1.81
KTN1-208ENST00000459737 RREB1Q92766 1687 aa3.77□□□□□ -1.81
KTN1-208ENST00000459737 LAMA2P24043 3122 aaKnown RBP3.77□□□□□ -1.81
KTN1-208ENST00000459737 NLRP1Q9C000 1473 aa3.77□□□□□ -1.81
KTN1-208ENST00000459737 COL18A1P39060 1754 aa3.77□□□□□ -1.81
KTN1-208ENST00000459737 C1QBPQ07021 282 aaKnown RBP3.77□□□□□ -1.81
KTN1-208ENST00000459737 C11orf95C9JLR9 678 aaPredicted RBP3.76□□□□□ -1.81
KTN1-208ENST00000459737 CCDC184Q52MB2 194 aa3.76□□□□□ -1.81
KTN1-208ENST00000459737 RGPD3A6NKT7 1758 aaPredicted RBP3.76□□□□□ -1.81
KTN1-208ENST00000459737 RGPD4Q7Z3J3 1758 aa3.76□□□□□ -1.81
KTN1-208ENST00000459737 KIF27Q86VH2 1401 aa3.76□□□□□ -1.81
KTN1-208ENST00000459737 QSER1Q2KHR3 1735 aa3.76□□□□□ -1.81
KTN1-208ENST00000459737 PLCH2O75038 1416 aa3.76□□□□□ -1.81
KTN1-208ENST00000459737 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.76□□□□□ -1.81
KTN1-208ENST00000459737 PHRF1Q9P1Y6 1649 aaKnown RBP3.76□□□□□ -1.81
KTN1-208ENST00000459737 SYCP2Q9BX26 1530 aa3.75□□□□□ -1.81
KTN1-208ENST00000459737 XIRP2A4UGR9 3374 aa3.75□□□□□ -1.81
KTN1-208ENST00000459737 CARMIL1Q5VZK9 1371 aa3.75□□□□□ -1.81
KTN1-208ENST00000459737 FGD6Q6ZV73 1430 aa3.75□□□□□ -1.81
KTN1-208ENST00000459737 LAMA3Q16787 3333 aa3.75□□□□□ -1.81
KTN1-208ENST00000459737 PTPRGP23470 1445 aa3.75□□□□□ -1.81
KTN1-208ENST00000459737 CDH23Q9H251 3354 aa3.74□□□□□ -1.81
KTN1-208ENST00000459737 ADGRL2O95490 1459 aa3.74□□□□□ -1.81
KTN1-208ENST00000459737 BCL11AQ9H165 835 aa3.74□□□□□ -1.81
KTN1-208ENST00000459737 ATP7AQ04656 1500 aa3.74□□□□□ -1.81
KTN1-208ENST00000459737 EHBP1L1Q8N3D4 1523 aa3.74□□□□□ -1.81
KTN1-208ENST00000459737 ZNF646O15015 1829 aaPredicted RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms