RNA–Protein interactions for RNA: ENST00000459708.1

SSX2IP-204, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 5

Gene SSX2IP, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-204ENST00000459708 E2F4Q16254 413 aa9.45□□□□□ -0.9
SSX2IP-204ENST00000459708 KCNV2Q8TDN2 545 aa9.45□□□□□ -0.9
SSX2IP-204ENST00000459708 EVI5O60447 810 aa9.44□□□□□ -0.9
SSX2IP-204ENST00000459708 ZDHHC16Q969W1 377 aa9.44□□□□□ -0.9
SSX2IP-204ENST00000459708 ADAM33Q9BZ11 813 aa9.44□□□□□ -0.9
SSX2IP-204ENST00000459708 IFFO2Q5TF58 517 aa9.43□□□□□ -0.9
SSX2IP-204ENST00000459708 NBPF3Q9H094 633 aa9.43□□□□□ -0.9
SSX2IP-204ENST00000459708 A0A0G2JS52 829 aa9.42□□□□□ -0.9
SSX2IP-204ENST00000459708 ANO8Q9HCE9 1232 aaPredicted RBP9.42□□□□□ -0.9
SSX2IP-204ENST00000459708 DPYSL4O14531 572 aa9.41□□□□□ -0.9
SSX2IP-204ENST00000459708 RGS20O76081 388 aa9.4□□□□□ -0.9
SSX2IP-204ENST00000459708 IRX2Q9BZI1 471 aaPredicted RBP9.39□□□□□ -0.91
SSX2IP-204ENST00000459708 P3H3Q8IVL6 736 aa9.38□□□□□ -0.91
SSX2IP-204ENST00000459708 MAP3K9P80192 1104 aa9.37□□□□□ -0.91
SSX2IP-204ENST00000459708 PPP1R3GB7ZBB8 358 aa9.36□□□□□ -0.91
SSX2IP-204ENST00000459708 PROX2Q3B8N5 592 aa9.35□□□□□ -0.91
SSX2IP-204ENST00000459708 ARIH1Q9Y4X5 557 aaPredicted RBP9.35□□□□□ -0.91
SSX2IP-204ENST00000459708 ANKK1Q8NFD2 765 aa9.34□□□□□ -0.91
SSX2IP-204ENST00000459708 PCDHGA10Q9Y5H3 936 aa9.34□□□□□ -0.91
SSX2IP-204ENST00000459708 PDIA6Q15084 440 aa9.33□□□□□ -0.92
SSX2IP-204ENST00000459708 ARHGEF1Q92888 912 aaKnown RBP9.33□□□□□ -0.92
SSX2IP-204ENST00000459708 RABGEF1Q9UJ41 708 aa9.33□□□□□ -0.92
SSX2IP-204ENST00000459708 COL9A1P20849 921 aa9.32□□□□□ -0.92
SSX2IP-204ENST00000459708 BCAMP50895 628 aa9.31□□□□□ -0.92
SSX2IP-204ENST00000459708 TYW1BQ6NUM6 668 aa9.29□□□□□ -0.92
SSX2IP-204ENST00000459708 ITGBL1O95965 494 aaPredicted RBP9.28□□□□□ -0.92
SSX2IP-204ENST00000459708 FBXW7Q969H0 707 aa9.28□□□□□ -0.92
SSX2IP-204ENST00000459708 SPDYE16A6NNV3 312 aaPredicted RBP9.27□□□□□ -0.93
SSX2IP-204ENST00000459708 PHF14O94880 888 aa9.27□□□□□ -0.93
SSX2IP-204ENST00000459708 SOWAHBA6NEL2 793 aa9.26□□□□□ -0.93
SSX2IP-204ENST00000459708 LAPTM4BQ86VI4 370 aa9.26□□□□□ -0.93
SSX2IP-204ENST00000459708 DDX12PQ92771 950 aa9.25□□□□□ -0.93
SSX2IP-204ENST00000459708 ZFRQ96KR1 1074 aaKnown RBP9.25□□□□□ -0.93
SSX2IP-204ENST00000459708 KIAA1468Q9P260 1216 aa9.25□□□□□ -0.93
SSX2IP-204ENST00000459708 SEPT9Q9UHD8 586 aaPredicted RBP9.25□□□□□ -0.93
SSX2IP-204ENST00000459708 SEMA3EO15041 775 aa9.24□□□□□ -0.93
SSX2IP-204ENST00000459708 WBP1LQ9NX94 342 aa9.23□□□□□ -0.93
SSX2IP-204ENST00000459708 MLLT3P42568 568 aaPredicted RBP9.22□□□□□ -0.93
SSX2IP-204ENST00000459708 NYAP1Q6ZVC0 841 aa9.21□□□□□ -0.94
SSX2IP-204ENST00000459708 C6orf132Q5T0Z8 1188 aa9.2□□□□□ -0.94
SSX2IP-204ENST00000459708 Q6ZNB5 142 aa9.2□□□□□ -0.94
SSX2IP-204ENST00000459708 EPAS1Q99814 870 aa9.2□□□□□ -0.94
SSX2IP-204ENST00000459708 GRXCR2A6NFK2 248 aa9.19□□□□□ -0.94
SSX2IP-204ENST00000459708 KCNC4Q03721 635 aa9.19□□□□□ -0.94
SSX2IP-204ENST00000459708 NBR1Q14596 966 aa9.19□□□□□ -0.94
SSX2IP-204ENST00000459708 RBM33Q96EV2 1170 aaKnown RBP9.19□□□□□ -0.94
SSX2IP-204ENST00000459708 TESPA1A2RU30 521 aaPredicted RBP9.18□□□□□ -0.94
SSX2IP-204ENST00000459708 TRIM6-TRIM34B2RNG4 842 aa9.18□□□□□ -0.94
SSX2IP-204ENST00000459708 ONECUT3O60422 494 aaPredicted RBP9.18□□□□□ -0.94
SSX2IP-204ENST00000459708 PRIM1P49642 420 aaKnown RBP9.18□□□□□ -0.94
SSX2IP-204ENST00000459708 FAM98CQ17RN3 349 aaKnown RBP9.17□□□□□ -0.94
SSX2IP-204ENST00000459708 HPS5Q9UPZ3 1129 aa9.17□□□□□ -0.94
SSX2IP-204ENST00000459708 LRCH3Q96II8 777 aa9.16□□□□□ -0.94
SSX2IP-204ENST00000459708 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.16□□□□□ -0.94
SSX2IP-204ENST00000459708 TSR3Q9UJK0 312 aaKnown RBP9.15□□□□□ -0.94
SSX2IP-204ENST00000459708 OSBPP22059 807 aa9.14□□□□□ -0.95
SSX2IP-204ENST00000459708 EN1Q05925 392 aaPredicted RBP9.14□□□□□ -0.95
SSX2IP-204ENST00000459708 MAP3K7O43318 606 aa9.11□□□□□ -0.95
SSX2IP-204ENST00000459708 TSR1Q2NL82 804 aaKnown RBP9.11□□□□□ -0.95
SSX2IP-204ENST00000459708 CDHR5Q9HBB8 845 aa9.1□□□□□ -0.95
SSX2IP-204ENST00000459708 TSKSQ9UJT2 592 aa9.1□□□□□ -0.95
SSX2IP-204ENST00000459708 RBM26Q5T8P6 1007 aaKnown RBP9.08□□□□□ -0.96
SSX2IP-204ENST00000459708 PACS2Q86VP3 889 aa9.08□□□□□ -0.96
SSX2IP-204ENST00000459708 BCANQ96GW7 911 aa9.07□□□□□ -0.96
SSX2IP-204ENST00000459708 PPP4CP60510 307 aa9.06□□□□□ -0.96
SSX2IP-204ENST00000459708 SMAPO00193 183 aa9.05□□□□□ -0.96
SSX2IP-204ENST00000459708 LAPTM4AQ15012 233 aa9.05□□□□□ -0.96
SSX2IP-204ENST00000459708 SMYD5Q6GMV2 418 aa9.05□□□□□ -0.96
SSX2IP-204ENST00000459708 SAMD7Q7Z3H4 446 aa9.04□□□□□ -0.96
SSX2IP-204ENST00000459708 NUTM2FA1L443 756 aa9.03□□□□□ -0.96
SSX2IP-204ENST00000459708 LCE2BO14633 110 aa9.03□□□□□ -0.96
SSX2IP-204ENST00000459708 GFRA3O60609 400 aa9.03□□□□□ -0.96
SSX2IP-204ENST00000459708 TJAP1Q5JTD0 557 aa9.02□□□□□ -0.97
SSX2IP-204ENST00000459708 LMOD2Q6P5Q4 547 aa9.02□□□□□ -0.97
SSX2IP-204ENST00000459708 CDCA7LQ96GN5 454 aa9.02□□□□□ -0.97
SSX2IP-204ENST00000459708 PRKD2Q9BZL6 878 aa9.02□□□□□ -0.97
SSX2IP-204ENST00000459708 TULP1O00294 542 aaPredicted RBP9.01□□□□□ -0.97
SSX2IP-204ENST00000459708 GPR37O15354 613 aa9.01□□□□□ -0.97
SSX2IP-204ENST00000459708 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.01□□□□□ -0.97
SSX2IP-204ENST00000459708 MTRQ99707 1265 aa9.01□□□□□ -0.97
SSX2IP-204ENST00000459708 FAM198AQ9UFP1 575 aa9.01□□□□□ -0.97
SSX2IP-204ENST00000459708 PRSS12P56730 875 aa9□□□□□ -0.97
SSX2IP-204ENST00000459708 TRAF7Q6Q0C0 670 aa9□□□□□ -0.97
SSX2IP-204ENST00000459708 NPDC1Q9NQX5 325 aaPredicted RBP9□□□□□ -0.97
SSX2IP-204ENST00000459708 NBPF26B4DH59 902 aa8.99□□□□□ -0.97
SSX2IP-204ENST00000459708 C3orf80F5H4A9 247 aa8.99□□□□□ -0.97
SSX2IP-204ENST00000459708 RNF40O75150 1001 aa8.99□□□□□ -0.97
SSX2IP-204ENST00000459708 PTGDRQ13258 359 aa8.99□□□□□ -0.97
SSX2IP-204ENST00000459708 GPIHBP1Q8IV16 184 aa8.99□□□□□ -0.97
SSX2IP-204ENST00000459708 IL21Q9HBE4 155 aa8.99□□□□□ -0.97
SSX2IP-204ENST00000459708 PNMA3Q9UL41 463 aa8.98□□□□□ -0.97
SSX2IP-204ENST00000459708 PPP1R18Q6NYC8 613 aa8.97□□□□□ -0.97
SSX2IP-204ENST00000459708 TATDN2Q93075 761 aa8.97□□□□□ -0.97
SSX2IP-204ENST00000459708 NRG2O14511 850 aaPredicted RBP8.96□□□□□ -0.98
SSX2IP-204ENST00000459708 CERKQ8TCT0 537 aa8.96□□□□□ -0.98
SSX2IP-204ENST00000459708 FCHSD2O94868 740 aa8.95□□□□□ -0.98
SSX2IP-204ENST00000459708 PADI6Q6TGC4 694 aa8.95□□□□□ -0.98
SSX2IP-204ENST00000459708 ZNF516Q92618 1163 aa8.95□□□□□ -0.98
SSX2IP-204ENST00000459708 APLP1P51693 650 aa8.93□□□□□ -0.98
SSX2IP-204ENST00000459708 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms