RNA–Protein interactions for RNA: ENST00000457478.1

LINC01250-201, Transcript of long intergenic non-protein coding RNA 1250, humanhuman

TSL 2 BASIC

Gene LINC01250, Length 2,344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01250-201ENST00000457478 FYCO1Q9BQS8 1478 aa19.14■□□□□ 0.65
LINC01250-201ENST00000457478 LRRIQ1Q96JM4 1722 aa19.14■□□□□ 0.65
LINC01250-201ENST00000457478 CCDC184Q52MB2 194 aa19.13■□□□□ 0.65
LINC01250-201ENST00000457478 KANK4Q5T7N3 995 aaPredicted RBP19.12■□□□□ 0.65
LINC01250-201ENST00000457478 CCDC18Q5T9S5 1454 aa19.11■□□□□ 0.65
LINC01250-201ENST00000457478 FAM9BQ8IZU0 186 aa19.11■□□□□ 0.65
LINC01250-201ENST00000457478 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.09■□□□□ 0.65
LINC01250-201ENST00000457478 COL17A1Q9UMD9 1497 aaPredicted RBP19.09■□□□□ 0.65
LINC01250-201ENST00000457478 MRS2Q9HD23 443 aa19.08■□□□□ 0.64
LINC01250-201ENST00000457478 TROQ12816 1431 aaPredicted RBP19.07■□□□□ 0.64
LINC01250-201ENST00000457478 TTC37Q6PGP7 1564 aa19.07■□□□□ 0.64
LINC01250-201ENST00000457478 PRKRIP1Q9H875 184 aaPredicted RBP19.06■□□□□ 0.64
LINC01250-201ENST00000457478 POGKQ9P215 609 aa19.05■□□□□ 0.64
LINC01250-201ENST00000457478 KIF14Q15058 1648 aa19.04■□□□□ 0.64
LINC01250-201ENST00000457478 SLC4A3P48751 1232 aa19.03■□□□□ 0.64
LINC01250-201ENST00000457478 SMAP1Q8IYB5 467 aaPredicted RBP19.03■□□□□ 0.64
LINC01250-201ENST00000457478 BBXQ8WY36 941 aaPredicted RBP19.03■□□□□ 0.64
LINC01250-201ENST00000457478 TONSLQ96HA7 1378 aa19.03■□□□□ 0.64
LINC01250-201ENST00000457478 NAP1L2Q9ULW6 460 aaPredicted RBP19.02■□□□□ 0.64
LINC01250-201ENST00000457478 MAP7D2Q96T17 732 aa19.02■□□□□ 0.64
LINC01250-201ENST00000457478 GTF2E1P29083 439 aaPredicted RBP19.01■□□□□ 0.63
LINC01250-201ENST00000457478 NEO1Q92859 1461 aa19.01■□□□□ 0.63
LINC01250-201ENST00000457478 FANCAO15360 1455 aa19■□□□□ 0.63
LINC01250-201ENST00000457478 PHLDB1Q86UU1 1377 aa19■□□□□ 0.63
LINC01250-201ENST00000457478 FSD2A1L4K1 749 aa18.99■□□□□ 0.63
LINC01250-201ENST00000457478 ARAP3Q8WWN8 1544 aa18.99■□□□□ 0.63
LINC01250-201ENST00000457478 XRCC6P12956 609 aaKnown RBP eCLIP18.99■□□□□ 0.63
LINC01250-201ENST00000457478 NCLP19338 710 aaKnown RBP18.98■□□□□ 0.63
LINC01250-201ENST00000457478 PLCH2O75038 1416 aa18.98■□□□□ 0.63
LINC01250-201ENST00000457478 ZNF326Q5BKZ1 582 aaKnown RBP18.96■□□□□ 0.63
LINC01250-201ENST00000457478 CFAP74Q9C0B2 1584 aa18.96■□□□□ 0.63
LINC01250-201ENST00000457478 MYO5CQ9NQX4 1742 aa18.95■□□□□ 0.62
LINC01250-201ENST00000457478 RAPGEF3O95398 923 aa18.95■□□□□ 0.62
LINC01250-201ENST00000457478 IPO4Q8TEX9 1081 aaKnown RBP18.95■□□□□ 0.62
LINC01250-201ENST00000457478 MTUS2Q5JR59 1369 aa18.95■□□□□ 0.62
LINC01250-201ENST00000457478 CANXP27824 592 aaKnown RBP18.95■□□□□ 0.62
LINC01250-201ENST00000457478 GOLGA6L3A6NEY3 463 aa18.94■□□□□ 0.62
LINC01250-201ENST00000457478 ESPNB1AK53 854 aa18.94■□□□□ 0.62
LINC01250-201ENST00000457478 RRP1P56182 461 aaKnown RBP18.94■□□□□ 0.62
LINC01250-201ENST00000457478 STAC3Q96MF2 364 aa18.94■□□□□ 0.62
LINC01250-201ENST00000457478 EXOC6Q8TAG9 804 aa18.93■□□□□ 0.62
LINC01250-201ENST00000457478 ARHGAP5Q13017 1502 aa18.92■□□□□ 0.62
LINC01250-201ENST00000457478 UTP14CQ5TAP6 766 aaKnown RBP18.92■□□□□ 0.62
LINC01250-201ENST00000457478 RSPH4AQ5TD94 716 aa18.92■□□□□ 0.62
LINC01250-201ENST00000457478 EFCAB2Q5VUJ9 269 aa18.92■□□□□ 0.62
LINC01250-201ENST00000457478 POLR1AO95602 1720 aaPredicted RBP18.9■□□□□ 0.62
LINC01250-201ENST00000457478 DENND4BO75064 1496 aaPredicted RBP18.9■□□□□ 0.62
LINC01250-201ENST00000457478 TERF1P54274 439 aa18.9■□□□□ 0.62
LINC01250-201ENST00000457478 ADGRL1O94910 1474 aa18.89■□□□□ 0.62
LINC01250-201ENST00000457478 CNGB1Q14028 1251 aaPredicted RBP18.89■□□□□ 0.61
LINC01250-201ENST00000457478 EHBP1L1Q8N3D4 1523 aa18.88■□□□□ 0.61
LINC01250-201ENST00000457478 NCOA1Q15788 1441 aa18.88■□□□□ 0.61
LINC01250-201ENST00000457478 FRMPD1Q5SYB0 1578 aa18.87■□□□□ 0.61
LINC01250-201ENST00000457478 SCAPERQ9BY12 1400 aa18.87■□□□□ 0.61
LINC01250-201ENST00000457478 PREX2Q70Z35 1606 aa18.87■□□□□ 0.61
LINC01250-201ENST00000457478 MAP3K1Q13233 1512 aa18.87■□□□□ 0.61
LINC01250-201ENST00000457478 CHMP4BQ9H444 224 aaKnown RBP18.86■□□□□ 0.61
LINC01250-201ENST00000457478 TIAM1Q13009 1591 aa18.86■□□□□ 0.61
LINC01250-201ENST00000457478 CDC42BPBQ9Y5S2 1711 aa18.86■□□□□ 0.61
LINC01250-201ENST00000457478 HSPA5P11021 654 aaKnown RBP18.85■□□□□ 0.61
LINC01250-201ENST00000457478 PANK2Q9BZ23 570 aa18.85■□□□□ 0.61
LINC01250-201ENST00000457478 ERBB4Q15303 1308 aa18.85■□□□□ 0.61
LINC01250-201ENST00000457478 CCDC7Q96M83 1385 aa18.85■□□□□ 0.61
LINC01250-201ENST00000457478 CDC42BPAQ5VT25 1732 aa18.84■□□□□ 0.61
LINC01250-201ENST00000457478 MRE11P49959 708 aa18.84■□□□□ 0.61
LINC01250-201ENST00000457478 VIRMAQ69YN4 1812 aaKnown RBP18.84■□□□□ 0.61
LINC01250-201ENST00000457478 RICTORQ6R327 1708 aa18.84■□□□□ 0.61
LINC01250-201ENST00000457478 AEBP2Q6ZN18 517 aaPredicted RBP18.84■□□□□ 0.61
LINC01250-201ENST00000457478 KIAA1211Q6ZU35 1233 aa18.84■□□□□ 0.61
LINC01250-201ENST00000457478 MTERF4Q7Z6M4 381 aaKnown RBP18.84■□□□□ 0.61
LINC01250-201ENST00000457478 FAM161AQ3B820 660 aa18.83■□□□□ 0.61
LINC01250-201ENST00000457478 ARID4BQ4LE39 1312 aaPredicted RBP18.83■□□□□ 0.6
LINC01250-201ENST00000457478 ZNF777Q9ULD5 760 aaPredicted RBP18.83■□□□□ 0.6
LINC01250-201ENST00000457478 GPATCH8Q9UKJ3 1502 aaKnown RBP18.83■□□□□ 0.6
LINC01250-201ENST00000457478 ISY1Q9ULR0 285 aaKnown RBP18.82■□□□□ 0.6
LINC01250-201ENST00000457478 POGZQ7Z3K3 1410 aa18.82■□□□□ 0.6
LINC01250-201ENST00000457478 DMTNQ08495 405 aa18.82■□□□□ 0.6
LINC01250-201ENST00000457478 RIPK4P57078 832 aa18.8■□□□□ 0.6
LINC01250-201ENST00000457478 CFDP1Q9UEE9 299 aaPredicted RBP18.8■□□□□ 0.6
LINC01250-201ENST00000457478 LRRC9Q6ZRR7 1453 aa18.8■□□□□ 0.6
LINC01250-201ENST00000457478 C8orf34Q49A92 452 aa18.79■□□□□ 0.6
LINC01250-201ENST00000457478 MYH16Q9H6N6 1097 aa18.79■□□□□ 0.6
LINC01250-201ENST00000457478 KDM4FA0A1W2PPD8 638 aa18.79■□□□□ 0.6
LINC01250-201ENST00000457478 ZHX1Q9UKY1 873 aaPredicted RBP18.79■□□□□ 0.6
LINC01250-201ENST00000457478 KTN1Q86UP2 1357 aaKnown RBP18.78■□□□□ 0.6
LINC01250-201ENST00000457478 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.6
LINC01250-201ENST00000457478 SUPT6HQ7KZ85 1726 aaKnown RBP18.78■□□□□ 0.6
LINC01250-201ENST00000457478 KLHL34Q8N239 644 aa18.77■□□□□ 0.6
LINC01250-201ENST00000457478 AFAP1Q8N556 730 aa18.77■□□□□ 0.6
LINC01250-201ENST00000457478 ABCC1P33527 1531 aa18.77■□□□□ 0.6
LINC01250-201ENST00000457478 ZMYM4Q5VZL5 1548 aa18.77■□□□□ 0.6
LINC01250-201ENST00000457478 ZNF518AQ6AHZ1 1483 aa18.77■□□□□ 0.59
LINC01250-201ENST00000457478 RCAN3Q9UKA8 241 aa18.75■□□□□ 0.59
LINC01250-201ENST00000457478 OFD1O75665 1012 aa18.75■□□□□ 0.59
LINC01250-201ENST00000457478 PAXIP1Q6ZW49 1069 aaPredicted RBP18.75■□□□□ 0.59
LINC01250-201ENST00000457478 ARHGEF40Q8TER5 1519 aa18.75■□□□□ 0.59
LINC01250-201ENST00000457478 ARHGEF12Q9NZN5 1544 aa18.75■□□□□ 0.59
LINC01250-201ENST00000457478 SAMD9LQ8IVG5 1584 aa18.75■□□□□ 0.59
LINC01250-201ENST00000457478 YEATS2Q9ULM3 1422 aa18.74■□□□□ 0.59
LINC01250-201ENST00000457478 ZFYVE16Q7Z3T8 1539 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms