RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 GTF3C3Q9Y5Q9 886 aa28.76■■■□□ 2.19
TMED4-203ENST00000457408 KIF3BO15066 747 aa28.74■■■□□ 2.19
TMED4-203ENST00000457408 IQGAP3Q86VI3 1631 aa28.74■■■□□ 2.19
TMED4-203ENST00000457408 C11orf95C9JLR9 678 aaPredicted RBP28.72■■■□□ 2.19
TMED4-203ENST00000457408 PLA2R1Q13018 1463 aa28.71■■■□□ 2.19
TMED4-203ENST00000457408 ANP32CO43423 234 aa28.71■■■□□ 2.19
TMED4-203ENST00000457408 INO80Q9ULG1 1556 aaPredicted RBP28.69■■■□□ 2.18
TMED4-203ENST00000457408 MAGI2Q86UL8 1455 aa28.68■■■□□ 2.18
TMED4-203ENST00000457408 ZNF518AQ6AHZ1 1483 aa28.65■■■□□ 2.18
TMED4-203ENST00000457408 RIMBP3CA6NJZ7 1639 aa28.64■■■□□ 2.18
TMED4-203ENST00000457408 RIMBP3BA6NNM3 1639 aa28.64■■■□□ 2.18
TMED4-203ENST00000457408 RIMBP3Q9UFD9 1639 aa28.64■■■□□ 2.18
TMED4-203ENST00000457408 DHX29Q7Z478 1369 aaKnown RBP28.64■■■□□ 2.18
TMED4-203ENST00000457408 CARD11Q9BXL7 1154 aa28.63■■■□□ 2.17
TMED4-203ENST00000457408 RAPGEF3O95398 923 aa28.63■■■□□ 2.17
TMED4-203ENST00000457408 USP47Q96K76 1375 aa28.62■■■□□ 2.17
TMED4-203ENST00000457408 SPATA31E1Q6ZUB1 1445 aa28.62■■■□□ 2.17
TMED4-203ENST00000457408 POLR3GLQ9BT43 218 aa28.61■■■□□ 2.17
TMED4-203ENST00000457408 KANK1Q14678 1352 aa28.6■■■□□ 2.17
TMED4-203ENST00000457408 UHRF1BP1Q6BDS2 1440 aa28.6■■■□□ 2.17
TMED4-203ENST00000457408 CCDC7Q96M83 1385 aa28.59■■■□□ 2.17
TMED4-203ENST00000457408 KIDINS220Q9ULH0 1771 aa28.58■■■□□ 2.17
TMED4-203ENST00000457408 POGZQ7Z3K3 1410 aa28.57■■■□□ 2.16
TMED4-203ENST00000457408 CFAP74Q9C0B2 1584 aa28.56■■■□□ 2.16
TMED4-203ENST00000457408 KIF7Q2M1P5 1343 aa28.55■■■□□ 2.16
TMED4-203ENST00000457408 E9PCH4 1651 aa28.54■■■□□ 2.16
TMED4-203ENST00000457408 RALGAPBQ86X10 1494 aa28.54■■■□□ 2.16
TMED4-203ENST00000457408 FAM69CQ0P6D2 419 aa28.53■■■□□ 2.16
TMED4-203ENST00000457408 ROCK2O75116 1388 aaKnown RBP28.52■■■□□ 2.16
TMED4-203ENST00000457408 MYT1Q01538 1121 aa28.52■■■□□ 2.16
TMED4-203ENST00000457408 GGT6Q6P531 493 aa28.52■■■□□ 2.16
TMED4-203ENST00000457408 DEPDC5O75140 1603 aa28.51■■■□□ 2.15
TMED4-203ENST00000457408 A2MP01023 1474 aa28.51■■■□□ 2.15
TMED4-203ENST00000457408 ATP10AO60312 1499 aa28.5■■■□□ 2.15
TMED4-203ENST00000457408 NBPF1Q3BBV0 1214 aa28.49■■■□□ 2.15
TMED4-203ENST00000457408 NEO1Q92859 1461 aa28.48■■■□□ 2.15
TMED4-203ENST00000457408 PRAG1Q86YV5 1406 aa28.47■■■□□ 2.15
TMED4-203ENST00000457408 ST20-MTHFSA0A0A6YYL1 179 aa28.47■■■□□ 2.15
TMED4-203ENST00000457408 KDM5CP41229 1560 aa28.46■■■□□ 2.15
TMED4-203ENST00000457408 CNTLNQ9NXG0 1405 aa28.46■■■□□ 2.15
TMED4-203ENST00000457408 CCER2I3L3R5 266 aa28.46■■■□□ 2.15
TMED4-203ENST00000457408 MLH3Q9UHC1 1453 aa28.45■■■□□ 2.14
TMED4-203ENST00000457408 EIF2AK4Q9P2K8 1649 aaKnown RBP28.45■■■□□ 2.14
TMED4-203ENST00000457408 HECW2Q9P2P5 1572 aa28.44■■■□□ 2.14
TMED4-203ENST00000457408 TET3O43151 1660 aa28.44■■■□□ 2.14
TMED4-203ENST00000457408 CNGB1Q14028 1251 aaPredicted RBP28.43■■■□□ 2.14
TMED4-203ENST00000457408 MROH1Q8NDA8 1641 aa28.43■■■□□ 2.14
TMED4-203ENST00000457408 BCORL1Q5H9F3 1711 aa28.42■■■□□ 2.14
TMED4-203ENST00000457408 PRDM15P57071 1507 aaPredicted RBP28.42■■■□□ 2.14
TMED4-203ENST00000457408 VWDEQ8N2E2 1590 aa28.41■■■□□ 2.14
TMED4-203ENST00000457408 MAP3K4Q9Y6R4 1608 aa28.4■■■□□ 2.14
TMED4-203ENST00000457408 SPHKAPQ2M3C7 1700 aa28.39■■■□□ 2.14
TMED4-203ENST00000457408 PTPRTO14522 1441 aa28.39■■■□□ 2.14
TMED4-203ENST00000457408 TRPM2O94759 1503 aa28.39■■■□□ 2.14
TMED4-203ENST00000457408 ABCA6Q8N139 1617 aa28.37■■■□□ 2.13
TMED4-203ENST00000457408 FRMPD1Q5SYB0 1578 aa28.37■■■□□ 2.13
TMED4-203ENST00000457408 TRPM1Q7Z4N2 1603 aa28.36■■■□□ 2.13
TMED4-203ENST00000457408 CLTCL1P53675 1640 aa28.36■■■□□ 2.13
TMED4-203ENST00000457408 WASHC2CQ9Y4E1 1318 aa28.35■■■□□ 2.13
TMED4-203ENST00000457408 TSPOAP1O95153 1857 aa28.33■■■□□ 2.13
TMED4-203ENST00000457408 UGGT1Q9NYU2 1555 aa28.33■■■□□ 2.13
TMED4-203ENST00000457408 POLR1AO95602 1720 aaPredicted RBP28.33■■■□□ 2.13
TMED4-203ENST00000457408 CEP152O94986 1710 aa28.32■■■□□ 2.12
TMED4-203ENST00000457408 GLI2P10070 1586 aa28.32■■■□□ 2.12
TMED4-203ENST00000457408 CHGAP10645 457 aaKnown RBP28.31■■■□□ 2.12
TMED4-203ENST00000457408 YEATS2Q9ULM3 1422 aa28.3■■■□□ 2.12
TMED4-203ENST00000457408 DIP2BQ9P265 1576 aa28.3■■■□□ 2.12
TMED4-203ENST00000457408 EFCAB6Q5THR3 1501 aa28.3■■■□□ 2.12
TMED4-203ENST00000457408 PPRC1Q5VV67 1664 aaKnown RBP28.3■■■□□ 2.12
TMED4-203ENST00000457408 PRKRIP1Q9H875 184 aaPredicted RBP28.29■■■□□ 2.12
TMED4-203ENST00000457408 CFAP65Q6ZU64 1925 aaKnown RBP28.29■■■□□ 2.12
TMED4-203ENST00000457408 RICTORQ6R327 1708 aa28.28■■■□□ 2.12
TMED4-203ENST00000457408 RNF17Q9BXT8 1623 aaKnown RBP28.27■■■□□ 2.12
TMED4-203ENST00000457408 DIP2CQ9Y2E4 1556 aa28.26■■■□□ 2.11
TMED4-203ENST00000457408 ARID4BQ4LE39 1312 aaPredicted RBP28.25■■■□□ 2.11
TMED4-203ENST00000457408 CCDC184Q52MB2 194 aa28.25■■■□□ 2.11
TMED4-203ENST00000457408 GPRASP1Q5JY77 1395 aa28.24■■■□□ 2.11
TMED4-203ENST00000457408 NPATQ14207 1427 aa28.22■■■□□ 2.11
TMED4-203ENST00000457408 LMTK2Q8IWU2 1503 aa28.22■■■□□ 2.11
TMED4-203ENST00000457408 MADDQ8WXG6 1647 aa28.17■■■□□ 2.1
TMED4-203ENST00000457408 ABCC3O15438 1527 aa28.17■■■□□ 2.1
TMED4-203ENST00000457408 MRS2Q9HD23 443 aa28.15■■■□□ 2.1
TMED4-203ENST00000457408 ADGRF5Q8IZF2 1346 aa28.15■■■□□ 2.1
TMED4-203ENST00000457408 TESK2Q96S53 571 aa28.14■■■□□ 2.1
TMED4-203ENST00000457408 STAC3Q96MF2 364 aa28.14■■■□□ 2.09
TMED4-203ENST00000457408 KIF1BO60333 1816 aa28.14■■■□□ 2.09
TMED4-203ENST00000457408 CFAP70Q5T0N1 1121 aa28.13■■■□□ 2.09
TMED4-203ENST00000457408 FAM9BQ8IZU0 186 aa28.13■■■□□ 2.09
TMED4-203ENST00000457408 DISP3Q9P2K9 1392 aa28.12■■■□□ 2.09
TMED4-203ENST00000457408 HNRNPUQ00839 825 aaKnown RBP eCLIP28.1■■■□□ 2.09
TMED4-203ENST00000457408 LAMC1P11047 1609 aa28.1■■■□□ 2.09
TMED4-203ENST00000457408 MROH2AA6NES4 1674 aa28.08■■■□□ 2.09
TMED4-203ENST00000457408 TMF1P82094 1093 aa28.08■■■□□ 2.09
TMED4-203ENST00000457408 CAMSAP1Q5T5Y3 1602 aa28.08■■■□□ 2.09
TMED4-203ENST00000457408 NUTM2DQ5VT03 806 aaPredicted RBP28.07■■■□□ 2.08
TMED4-203ENST00000457408 NOS1P29475 1434 aa28.05■■■□□ 2.08
TMED4-203ENST00000457408 MLECQ14165 292 aa28.05■■■□□ 2.08
TMED4-203ENST00000457408 SENP3Q9H4L4 574 aaPredicted RBP28.03■■■□□ 2.08
TMED4-203ENST00000457408 ZMYM4Q5VZL5 1548 aa28.03■■■□□ 2.08
TMED4-203ENST00000457408 COL17A1Q9UMD9 1497 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms