RNA–Protein interactions for RNA: ENST00000457356.8

MSC-AS1-201, MSC antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene MSC-AS1, Length 4,220 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-201ENST00000457356 NCOA2Q15596 1464 aa12.53□□□□□ -0.4
MSC-AS1-201ENST00000457356 FYCO1Q9BQS8 1478 aa12.53□□□□□ -0.4
MSC-AS1-201ENST00000457356 TXNDC2Q86VQ3 553 aa12.53□□□□□ -0.4
MSC-AS1-201ENST00000457356 THEMISQ8N1K5 641 aaPredicted RBP12.53□□□□□ -0.4
MSC-AS1-201ENST00000457356 PNNQ9H307 717 aaKnown RBP12.53□□□□□ -0.4
MSC-AS1-201ENST00000457356 FTSJ3Q8IY81 847 aaKnown RBP12.52□□□□□ -0.41
MSC-AS1-201ENST00000457356 CC2D1BQ5T0F9 858 aaKnown RBP12.52□□□□□ -0.41
MSC-AS1-201ENST00000457356 KNSTRNQ9Y448 316 aa12.52□□□□□ -0.41
MSC-AS1-201ENST00000457356 IPO9Q96P70 1041 aaKnown RBP12.51□□□□□ -0.41
MSC-AS1-201ENST00000457356 RAB3GAP2Q9H2M9 1393 aa12.51□□□□□ -0.41
MSC-AS1-201ENST00000457356 ARHGEF11O15085 1522 aa12.51□□□□□ -0.41
MSC-AS1-201ENST00000457356 EPRSP07814 1512 aaKnown RBP12.51□□□□□ -0.41
MSC-AS1-201ENST00000457356 CEBPAP49715 358 aaPredicted RBP12.51□□□□□ -0.41
MSC-AS1-201ENST00000457356 NGDNQ8NEJ9 315 aaKnown RBP12.51□□□□□ -0.41
MSC-AS1-201ENST00000457356 PLEKHH2Q8IVE3 1493 aa12.5□□□□□ -0.41
MSC-AS1-201ENST00000457356 FGD6Q6ZV73 1430 aa12.5□□□□□ -0.41
MSC-AS1-201ENST00000457356 HECW1Q76N89 1606 aa12.49□□□□□ -0.41
MSC-AS1-201ENST00000457356 HSP90AB1P08238 724 aaKnown RBP12.49□□□□□ -0.41
MSC-AS1-201ENST00000457356 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.49□□□□□ -0.41
MSC-AS1-201ENST00000457356 BRPF3Q9ULD4 1205 aa12.49□□□□□ -0.41
MSC-AS1-201ENST00000457356 ADGRL1O94910 1474 aa12.49□□□□□ -0.41
MSC-AS1-201ENST00000457356 LRRC9Q6ZRR7 1453 aa12.49□□□□□ -0.41
MSC-AS1-201ENST00000457356 TRAK1Q9UPV9 953 aa12.49□□□□□ -0.41
MSC-AS1-201ENST00000457356 L1TD1Q5T7N2 865 aaKnown RBP12.49□□□□□ -0.41
MSC-AS1-201ENST00000457356 PHLDB1Q86UU1 1377 aa12.49□□□□□ -0.41
MSC-AS1-201ENST00000457356 A0A0U1RQG5 324 aaPredicted RBP12.48□□□□□ -0.41
MSC-AS1-201ENST00000457356 CDK11BP21127 795 aaKnown RBP12.48□□□□□ -0.41
MSC-AS1-201ENST00000457356 ADAMTS12P58397 1594 aa12.48□□□□□ -0.41
MSC-AS1-201ENST00000457356 CCDC144AA2RUR9 1427 aa12.48□□□□□ -0.41
MSC-AS1-201ENST00000457356 PODXL2Q9NZ53 605 aa12.48□□□□□ -0.41
MSC-AS1-201ENST00000457356 DENND4BO75064 1496 aaPredicted RBP12.48□□□□□ -0.41
MSC-AS1-201ENST00000457356 ANKLE2Q86XL3 938 aa12.48□□□□□ -0.41
MSC-AS1-201ENST00000457356 NUP160Q12769 1436 aa12.47□□□□□ -0.41
MSC-AS1-201ENST00000457356 MSNP26038 577 aaKnown RBP12.47□□□□□ -0.41
MSC-AS1-201ENST00000457356 ANKRD50Q9ULJ7 1429 aa12.47□□□□□ -0.41
MSC-AS1-201ENST00000457356 TEX14Q8IWB6 1497 aa12.47□□□□□ -0.41
MSC-AS1-201ENST00000457356 ATF3P18847 181 aa12.47□□□□□ -0.41
MSC-AS1-201ENST00000457356 PROSER2Q86WR7 435 aaPredicted RBP12.46□□□□□ -0.41
MSC-AS1-201ENST00000457356 TMF1P82094 1093 aa12.46□□□□□ -0.41
MSC-AS1-201ENST00000457356 CSB-PGBD3P0DP91 1061 aa12.45□□□□□ -0.42
MSC-AS1-201ENST00000457356 HSPA5P11021 654 aaKnown RBP12.45□□□□□ -0.42
MSC-AS1-201ENST00000457356 SLC4A3P48751 1232 aa12.45□□□□□ -0.42
MSC-AS1-201ENST00000457356 FANCAO15360 1455 aa12.45□□□□□ -0.42
MSC-AS1-201ENST00000457356 HDGFL2Q7Z4V5 671 aaPredicted RBP12.44□□□□□ -0.42
MSC-AS1-201ENST00000457356 TCERG1O14776 1098 aaKnown RBP12.43□□□□□ -0.42
MSC-AS1-201ENST00000457356 AKNAQ7Z591 1439 aa12.43□□□□□ -0.42
MSC-AS1-201ENST00000457356 MEX3CQ5U5Q3 659 aaKnown RBP12.42□□□□□ -0.42
MSC-AS1-201ENST00000457356 CFAP53Q96M91 514 aa12.42□□□□□ -0.42
MSC-AS1-201ENST00000457356 RCAN3Q9UKA8 241 aa12.42□□□□□ -0.42
MSC-AS1-201ENST00000457356 C9orf84Q5VXU9 1444 aa12.42□□□□□ -0.42
MSC-AS1-201ENST00000457356 THOC2Q8NI27 1593 aaKnown RBP12.42□□□□□ -0.42
MSC-AS1-201ENST00000457356 HSCBQ8IWL3 235 aa12.42□□□□□ -0.42
MSC-AS1-201ENST00000457356 SLC26A8Q96RN1 970 aa12.42□□□□□ -0.42
MSC-AS1-201ENST00000457356 ATP10BO94823 1461 aa12.41□□□□□ -0.42
MSC-AS1-201ENST00000457356 PIP4K2BP78356 416 aa12.41□□□□□ -0.42
MSC-AS1-201ENST00000457356 ROCK2O75116 1388 aaKnown RBP12.41□□□□□ -0.42
MSC-AS1-201ENST00000457356 WDR7Q9Y4E6 1490 aa12.41□□□□□ -0.42
MSC-AS1-201ENST00000457356 TAOK2Q9UL54 1235 aa12.41□□□□□ -0.42
MSC-AS1-201ENST00000457356 ZRSR1Q15695 479 aaKnown RBP12.4□□□□□ -0.42
MSC-AS1-201ENST00000457356 L3MBTL2Q969R5 705 aa12.4□□□□□ -0.42
MSC-AS1-201ENST00000457356 EHBP1L1Q8N3D4 1523 aa12.4□□□□□ -0.42
MSC-AS1-201ENST00000457356 SLC52A1Q9NWF4 448 aa12.39□□□□□ -0.43
MSC-AS1-201ENST00000457356 MINK1Q8N4C8 1332 aaPredicted RBP12.39□□□□□ -0.43
MSC-AS1-201ENST00000457356 CEP170Q5SW79 1584 aa12.39□□□□□ -0.43
MSC-AS1-201ENST00000457356 ABCC2Q92887 1545 aa12.38□□□□□ -0.43
MSC-AS1-201ENST00000457356 HSP90AA2PQ14568 343 aaPredicted RBP12.37□□□□□ -0.43
MSC-AS1-201ENST00000457356 DMRT2Q9Y5R5 561 aa12.37□□□□□ -0.43
MSC-AS1-201ENST00000457356 MIA2Q96PC5 1412 aa12.37□□□□□ -0.43
MSC-AS1-201ENST00000457356 CASC1Q6TDU7 716 aa12.37□□□□□ -0.43
MSC-AS1-201ENST00000457356 FBXO31Q5XUX0 539 aaPredicted RBP12.36□□□□□ -0.43
MSC-AS1-201ENST00000457356 TARBP1Q13395 1621 aaKnown RBP12.36□□□□□ -0.43
MSC-AS1-201ENST00000457356 PHF23Q9BUL5 403 aaPredicted RBP12.36□□□□□ -0.43
MSC-AS1-201ENST00000457356 KIF14Q15058 1648 aa12.36□□□□□ -0.43
MSC-AS1-201ENST00000457356 GOLGA6L3A6NEY3 463 aa12.35□□□□□ -0.43
MSC-AS1-201ENST00000457356 U2SURPO15042 1029 aaKnown RBP12.35□□□□□ -0.43
MSC-AS1-201ENST00000457356 PSME1Q06323 249 aa12.35□□□□□ -0.43
MSC-AS1-201ENST00000457356 HSPA2P54652 639 aa12.35□□□□□ -0.43
MSC-AS1-201ENST00000457356 PBRM1Q86U86 1689 aa12.34□□□□□ -0.43
MSC-AS1-201ENST00000457356 TERF2IPQ9NYB0 399 aa12.34□□□□□ -0.43
MSC-AS1-201ENST00000457356 NUDCQ9Y266 331 aa12.34□□□□□ -0.43
MSC-AS1-201ENST00000457356 CHAF1AQ13111 956 aaPredicted RBP12.34□□□□□ -0.43
MSC-AS1-201ENST00000457356 GSE1Q14687 1217 aa12.34□□□□□ -0.43
MSC-AS1-201ENST00000457356 TMEM132EQ6IEE7 984 aa12.34□□□□□ -0.43
MSC-AS1-201ENST00000457356 EIF3AQ14152 1382 aaKnown RBP12.33□□□□□ -0.43
MSC-AS1-201ENST00000457356 UGGT2Q9NYU1 1516 aa12.33□□□□□ -0.44
MSC-AS1-201ENST00000457356 CCDC141Q6ZP82 1450 aa12.33□□□□□ -0.44
MSC-AS1-201ENST00000457356 PDE4AP27815 886 aa12.33□□□□□ -0.44
MSC-AS1-201ENST00000457356 MAPK8IP3Q9UPT6 1336 aa12.33□□□□□ -0.44
MSC-AS1-201ENST00000457356 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.32□□□□□ -0.44
MSC-AS1-201ENST00000457356 ABCA5Q8WWZ7 1642 aa12.32□□□□□ -0.44
MSC-AS1-201ENST00000457356 APBB1O00213 710 aa12.32□□□□□ -0.44
MSC-AS1-201ENST00000457356 MORC1Q86VD1 984 aa12.32□□□□□ -0.44
MSC-AS1-201ENST00000457356 PCF11O94913 1555 aaKnown RBP12.32□□□□□ -0.44
MSC-AS1-201ENST00000457356 PLCH2O75038 1416 aa12.31□□□□□ -0.44
MSC-AS1-201ENST00000457356 EVA1CP58658 441 aa12.31□□□□□ -0.44
MSC-AS1-201ENST00000457356 KIAA0556O60303 1618 aa12.31□□□□□ -0.44
MSC-AS1-201ENST00000457356 NUP153P49790 1475 aaKnown RBP12.31□□□□□ -0.44
MSC-AS1-201ENST00000457356 GOLGA6L4A6NEF3 574 aa12.31□□□□□ -0.44
MSC-AS1-201ENST00000457356 NPHP1O15259 732 aa12.31□□□□□ -0.44
MSC-AS1-201ENST00000457356 USP35Q9P2H5 1018 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms