RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 WDR7Q9Y4E6 1490 aa17.13■□□□□ 0.33
LINC00959-201ENST00000456581 KDM5DQ9BY66 1539 aa17.12■□□□□ 0.33
LINC00959-201ENST00000456581 DCAF11Q8TEB1 546 aa17.12■□□□□ 0.33
LINC00959-201ENST00000456581 ABCC1P33527 1531 aa17.11■□□□□ 0.33
LINC00959-201ENST00000456581 ASXL2Q76L83 1435 aa17.11■□□□□ 0.33
LINC00959-201ENST00000456581 SPAG9O60271 1321 aaKnown RBP17.1■□□□□ 0.33
LINC00959-201ENST00000456581 POLR3GLQ9BT43 218 aa17.1■□□□□ 0.33
LINC00959-201ENST00000456581 MYT1LQ9UL68 1186 aa17.1■□□□□ 0.33
LINC00959-201ENST00000456581 MAST1Q9Y2H9 1570 aa17.1■□□□□ 0.33
LINC00959-201ENST00000456581 SPATA31E1Q6ZUB1 1445 aa17.1■□□□□ 0.33
LINC00959-201ENST00000456581 CCDC7Q96M83 1385 aa17.09■□□□□ 0.33
LINC00959-201ENST00000456581 KIF7Q2M1P5 1343 aa17.08■□□□□ 0.32
LINC00959-201ENST00000456581 PLA2R1Q13018 1463 aa17.08■□□□□ 0.32
LINC00959-201ENST00000456581 B4GALNT3Q6L9W6 998 aa17.07■□□□□ 0.32
LINC00959-201ENST00000456581 FANCAO15360 1455 aa17.07■□□□□ 0.32
LINC00959-201ENST00000456581 PLXNC1O60486 1568 aa17.06■□□□□ 0.32
LINC00959-201ENST00000456581 GLI2P10070 1586 aa17.06■□□□□ 0.32
LINC00959-201ENST00000456581 USP47Q96K76 1375 aa17.06■□□□□ 0.32
LINC00959-201ENST00000456581 DUOX2Q9NRD8 1548 aa17.04■□□□□ 0.32
LINC00959-201ENST00000456581 MRS2Q9HD23 443 aa17.04■□□□□ 0.32
LINC00959-201ENST00000456581 NPM1P06748 294 aaKnown RBP eCLIP17.04■□□□□ 0.32
LINC00959-201ENST00000456581 CARD11Q9BXL7 1154 aa17.04■□□□□ 0.32
LINC00959-201ENST00000456581 CCDC144AA2RUR9 1427 aa17.04■□□□□ 0.32
LINC00959-201ENST00000456581 UNC13BO14795 1591 aa17.03■□□□□ 0.32
LINC00959-201ENST00000456581 SCAPERQ9BY12 1400 aa17.03■□□□□ 0.32
LINC00959-201ENST00000456581 PRKRIP1Q9H875 184 aaPredicted RBP17.03■□□□□ 0.32
LINC00959-201ENST00000456581 CNTLNQ9NXG0 1405 aa17.02■□□□□ 0.31
LINC00959-201ENST00000456581 NBPF1Q3BBV0 1214 aa17.01■□□□□ 0.31
LINC00959-201ENST00000456581 ADGRL1O94910 1474 aa17.01■□□□□ 0.31
LINC00959-201ENST00000456581 BCORL1Q5H9F3 1711 aa17■□□□□ 0.31
LINC00959-201ENST00000456581 ABCA9Q8IUA7 1624 aa17■□□□□ 0.31
LINC00959-201ENST00000456581 ERBINQ96RT1 1412 aa17■□□□□ 0.31
LINC00959-201ENST00000456581 ZFYVE16Q7Z3T8 1539 aa17■□□□□ 0.31
LINC00959-201ENST00000456581 KIF3BO15066 747 aa16.99■□□□□ 0.31
LINC00959-201ENST00000456581 ST20-MTHFSA0A0A6YYL1 179 aa16.99■□□□□ 0.31
LINC00959-201ENST00000456581 IQGAP3Q86VI3 1631 aa16.99■□□□□ 0.31
LINC00959-201ENST00000456581 UHRF1BP1Q6BDS2 1440 aa16.98■□□□□ 0.31
LINC00959-201ENST00000456581 ARAP3Q8WWN8 1544 aa16.97■□□□□ 0.31
LINC00959-201ENST00000456581 RALGAPBQ86X10 1494 aa16.96■□□□□ 0.31
LINC00959-201ENST00000456581 KDM5CP41229 1560 aa16.96■□□□□ 0.31
LINC00959-201ENST00000456581 ROCK2O75116 1388 aaKnown RBP16.95■□□□□ 0.3
LINC00959-201ENST00000456581 CYB5RLQ6IPT4 315 aa16.95■□□□□ 0.3
LINC00959-201ENST00000456581 MAGI2Q86UL8 1455 aa16.95■□□□□ 0.3
LINC00959-201ENST00000456581 A2MP01023 1474 aa16.95■□□□□ 0.3
LINC00959-201ENST00000456581 ATP7AQ04656 1500 aa16.95■□□□□ 0.3
LINC00959-201ENST00000456581 RTEL1-TNFRSF6BF6WH68 1400 aa16.94■□□□□ 0.3
LINC00959-201ENST00000456581 CD109Q6YHK3 1445 aa16.92■□□□□ 0.3
LINC00959-201ENST00000456581 PRAG1Q86YV5 1406 aa16.92■□□□□ 0.3
LINC00959-201ENST00000456581 DIP2BQ9P265 1576 aa16.92■□□□□ 0.3
LINC00959-201ENST00000456581 KIF13AQ9H1H9 1805 aa16.91■□□□□ 0.3
LINC00959-201ENST00000456581 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
LINC00959-201ENST00000456581 E9PCH4 1651 aa16.9■□□□□ 0.3
LINC00959-201ENST00000456581 RAPGEF3O95398 923 aa16.9■□□□□ 0.3
LINC00959-201ENST00000456581 PPP4R2Q9NY27 417 aa16.9■□□□□ 0.3
LINC00959-201ENST00000456581 POLR1AO95602 1720 aaPredicted RBP16.88■□□□□ 0.29
LINC00959-201ENST00000456581 DHX29Q7Z478 1369 aaKnown RBP16.87■□□□□ 0.29
LINC00959-201ENST00000456581 PAK3O75914 559 aaPredicted RBP16.87■□□□□ 0.29
LINC00959-201ENST00000456581 ATP10AO60312 1499 aa16.87■□□□□ 0.29
LINC00959-201ENST00000456581 KIDINS220Q9ULH0 1771 aa16.86■□□□□ 0.29
LINC00959-201ENST00000456581 ZBED9Q6R2W3 1325 aa16.86■□□□□ 0.29
LINC00959-201ENST00000456581 FANCIQ9NVI1 1328 aa16.86■□□□□ 0.29
LINC00959-201ENST00000456581 MAP3K4Q9Y6R4 1608 aa16.86■□□□□ 0.29
LINC00959-201ENST00000456581 TRPM1Q7Z4N2 1603 aa16.85■□□□□ 0.29
LINC00959-201ENST00000456581 GGT6Q6P531 493 aa16.85■□□□□ 0.29
LINC00959-201ENST00000456581 CFAP65Q6ZU64 1925 aaKnown RBP16.84■□□□□ 0.29
LINC00959-201ENST00000456581 ERICH6Q7L0X2 663 aa16.84■□□□□ 0.29
LINC00959-201ENST00000456581 UGGT1Q9NYU2 1555 aa16.83■□□□□ 0.29
LINC00959-201ENST00000456581 NBR1Q14596 966 aa16.83■□□□□ 0.28
LINC00959-201ENST00000456581 DEPDC5O75140 1603 aa16.82■□□□□ 0.28
LINC00959-201ENST00000456581 KANK1Q14678 1352 aa16.82■□□□□ 0.28
LINC00959-201ENST00000456581 ZNF518AQ6AHZ1 1483 aa16.82■□□□□ 0.28
LINC00959-201ENST00000456581 MROH1Q8NDA8 1641 aa16.82■□□□□ 0.28
LINC00959-201ENST00000456581 CLTCL1P53675 1640 aa16.81■□□□□ 0.28
LINC00959-201ENST00000456581 POGZQ7Z3K3 1410 aa16.8■□□□□ 0.28
LINC00959-201ENST00000456581 PTPRTO14522 1441 aa16.79■□□□□ 0.28
LINC00959-201ENST00000456581 SPHKAPQ2M3C7 1700 aa16.79■□□□□ 0.28
LINC00959-201ENST00000456581 TESK2Q96S53 571 aa16.78■□□□□ 0.28
LINC00959-201ENST00000456581 SALL2Q9Y467 1007 aaPredicted RBP16.78■□□□□ 0.28
LINC00959-201ENST00000456581 TRPM2O94759 1503 aa16.78■□□□□ 0.28
LINC00959-201ENST00000456581 TET3O43151 1660 aa16.78■□□□□ 0.28
LINC00959-201ENST00000456581 GPRASP1Q5JY77 1395 aa16.78■□□□□ 0.28
LINC00959-201ENST00000456581 DISP3Q9P2K9 1392 aa16.78■□□□□ 0.28
LINC00959-201ENST00000456581 VWDEQ8N2E2 1590 aa16.78■□□□□ 0.28
LINC00959-201ENST00000456581 CHGAP10645 457 aaKnown RBP16.76■□□□□ 0.27
LINC00959-201ENST00000456581 PRDM15P57071 1507 aaPredicted RBP16.76■□□□□ 0.27
LINC00959-201ENST00000456581 ARID4BQ4LE39 1312 aaPredicted RBP16.76■□□□□ 0.27
LINC00959-201ENST00000456581 PPRC1Q5VV67 1664 aaKnown RBP16.75■□□□□ 0.27
LINC00959-201ENST00000456581 FRMPD1Q5SYB0 1578 aa16.75■□□□□ 0.27
LINC00959-201ENST00000456581 CEP152O94986 1710 aa16.74■□□□□ 0.27
LINC00959-201ENST00000456581 ADGRF5Q8IZF2 1346 aa16.73■□□□□ 0.27
LINC00959-201ENST00000456581 FAM69CQ0P6D2 419 aa16.73■□□□□ 0.27
LINC00959-201ENST00000456581 SENP3Q9H4L4 574 aaPredicted RBP16.72■□□□□ 0.27
LINC00959-201ENST00000456581 EIF2AK4Q9P2K8 1649 aaKnown RBP16.72■□□□□ 0.27
LINC00959-201ENST00000456581 ABCA6Q8N139 1617 aa16.72■□□□□ 0.27
LINC00959-201ENST00000456581 DEKP35659 375 aaKnown RBP16.72■□□□□ 0.27
LINC00959-201ENST00000456581 CFAP70Q5T0N1 1121 aa16.72■□□□□ 0.27
LINC00959-201ENST00000456581 MLH3Q9UHC1 1453 aa16.72■□□□□ 0.27
LINC00959-201ENST00000456581 ERICH6BQ5W0A0 696 aa16.71■□□□□ 0.27
LINC00959-201ENST00000456581 WASHC2CQ9Y4E1 1318 aa16.71■□□□□ 0.27
LINC00959-201ENST00000456581 MADDQ8WXG6 1647 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms