RNA–Protein interactions for RNA: ENST00000456062.1

AC004872.1-201, humanhuman

TSL 3 BASIC

Gene AC004872.1, Length 469 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004872.1-201ENST00000456062 DCAF8L2P0C7V8 631 aa11.95□□□□□ -0.5
AC004872.1-201ENST00000456062 PROX2Q3B8N5 592 aa11.95□□□□□ -0.5
AC004872.1-201ENST00000456062 A0A0G2JS52 829 aa11.94□□□□□ -0.5
AC004872.1-201ENST00000456062 ONECUT3O60422 494 aaPredicted RBP11.94□□□□□ -0.5
AC004872.1-201ENST00000456062 LAPTM4BQ86VI4 370 aa11.94□□□□□ -0.5
AC004872.1-201ENST00000456062 EPAS1Q99814 870 aa11.93□□□□□ -0.5
AC004872.1-201ENST00000456062 ANKK1Q8NFD2 765 aa11.92□□□□□ -0.5
AC004872.1-201ENST00000456062 ITGBL1O95965 494 aaPredicted RBP11.88□□□□□ -0.51
AC004872.1-201ENST00000456062 C6orf132Q5T0Z8 1188 aa11.88□□□□□ -0.51
AC004872.1-201ENST00000456062 SOWAHBA6NEL2 793 aa11.87□□□□□ -0.51
AC004872.1-201ENST00000456062 DPYSL4O14531 572 aa11.87□□□□□ -0.51
AC004872.1-201ENST00000456062 KIAA1468Q9P260 1216 aa11.87□□□□□ -0.51
AC004872.1-201ENST00000456062 NYAP1Q6ZVC0 841 aa11.86□□□□□ -0.51
AC004872.1-201ENST00000456062 ZFRQ96KR1 1074 aaKnown RBP11.85□□□□□ -0.51
AC004872.1-201ENST00000456062 TRIM6-TRIM34B2RNG4 842 aa11.84□□□□□ -0.51
AC004872.1-201ENST00000456062 BCAMP50895 628 aa11.84□□□□□ -0.51
AC004872.1-201ENST00000456062 BBXQ8WY36 941 aaPredicted RBP11.82□□□□□ -0.52
AC004872.1-201ENST00000456062 FAM98CQ17RN3 349 aaKnown RBP11.8□□□□□ -0.52
AC004872.1-201ENST00000456062 PDIA6Q15084 440 aa11.79□□□□□ -0.52
AC004872.1-201ENST00000456062 DDX12PQ92771 950 aa11.78□□□□□ -0.52
AC004872.1-201ENST00000456062 IRX2Q9BZI1 471 aaPredicted RBP11.78□□□□□ -0.52
AC004872.1-201ENST00000456062 SEPT9Q9UHD8 586 aaPredicted RBP11.78□□□□□ -0.52
AC004872.1-201ENST00000456062 EN1Q05925 392 aaPredicted RBP11.77□□□□□ -0.53
AC004872.1-201ENST00000456062 WBP1LQ9NX94 342 aa11.77□□□□□ -0.53
AC004872.1-201ENST00000456062 RBM33Q96EV2 1170 aaKnown RBP11.76□□□□□ -0.53
AC004872.1-201ENST00000456062 SPDYE16A6NNV3 312 aaPredicted RBP11.75□□□□□ -0.53
AC004872.1-201ENST00000456062 NBR1Q14596 966 aa11.73□□□□□ -0.53
AC004872.1-201ENST00000456062 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.72□□□□□ -0.53
AC004872.1-201ENST00000456062 TSR3Q9UJK0 312 aaKnown RBP11.72□□□□□ -0.53
AC004872.1-201ENST00000456062 TSKSQ9UJT2 592 aa11.72□□□□□ -0.53
AC004872.1-201ENST00000456062 ARIH1Q9Y4X5 557 aaPredicted RBP11.72□□□□□ -0.53
AC004872.1-201ENST00000456062 TSR1Q2NL82 804 aaKnown RBP11.71□□□□□ -0.53
AC004872.1-201ENST00000456062 LRCH3Q96II8 777 aa11.71□□□□□ -0.53
AC004872.1-201ENST00000456062 MAP3K7O43318 606 aa11.7□□□□□ -0.54
AC004872.1-201ENST00000456062 KCNC4Q03721 635 aa11.7□□□□□ -0.54
AC004872.1-201ENST00000456062 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
AC004872.1-201ENST00000456062 SPRYD3Q8NCJ5 442 aa11.68□□□□□ -0.54
AC004872.1-201ENST00000456062 HPS5Q9UPZ3 1129 aa11.68□□□□□ -0.54
AC004872.1-201ENST00000456062 E2F4Q16254 413 aa11.66□□□□□ -0.54
AC004872.1-201ENST00000456062 CERKQ8TCT0 537 aa11.66□□□□□ -0.54
AC004872.1-201ENST00000456062 CDCA7LQ96GN5 454 aa11.65□□□□□ -0.54
AC004872.1-201ENST00000456062 PRSS12P56730 875 aa11.64□□□□□ -0.55
AC004872.1-201ENST00000456062 PRIM1P49642 420 aaKnown RBP11.63□□□□□ -0.55
AC004872.1-201ENST00000456062 FAM198AQ9UFP1 575 aa11.62□□□□□ -0.55
AC004872.1-201ENST00000456062 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.61□□□□□ -0.55
AC004872.1-201ENST00000456062 RBM27Q9P2N5 1060 aaKnown RBP11.6□□□□□ -0.55
AC004872.1-201ENST00000456062 PPP4CP60510 307 aa11.59□□□□□ -0.55
AC004872.1-201ENST00000456062 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
AC004872.1-201ENST00000456062 SAMD7Q7Z3H4 446 aa11.58□□□□□ -0.56
AC004872.1-201ENST00000456062 TJAP1Q5JTD0 557 aa11.57□□□□□ -0.56
AC004872.1-201ENST00000456062 TATDN2Q93075 761 aa11.57□□□□□ -0.56
AC004872.1-201ENST00000456062 C3orf80F5H4A9 247 aa11.56□□□□□ -0.56
AC004872.1-201ENST00000456062 SMAPO00193 183 aa11.56□□□□□ -0.56
AC004872.1-201ENST00000456062 OSBPP22059 807 aa11.56□□□□□ -0.56
AC004872.1-201ENST00000456062 GRXCR2A6NFK2 248 aa11.55□□□□□ -0.56
AC004872.1-201ENST00000456062 WDR70Q9NW82 654 aa11.54□□□□□ -0.56
AC004872.1-201ENST00000456062 PNMA3Q9UL41 463 aa11.53□□□□□ -0.56
AC004872.1-201ENST00000456062 LAPTM4AQ15012 233 aa11.52□□□□□ -0.57
AC004872.1-201ENST00000456062 TTC13Q8NBP0 860 aa11.52□□□□□ -0.57
AC004872.1-201ENST00000456062 CDHR5Q9HBB8 845 aa11.52□□□□□ -0.57
AC004872.1-201ENST00000456062 IL21Q9HBE4 155 aa11.51□□□□□ -0.57
AC004872.1-201ENST00000456062 AMER1Q5JTC6 1135 aaPredicted RBP11.5□□□□□ -0.57
AC004872.1-201ENST00000456062 Q6ZNB5 142 aa11.5□□□□□ -0.57
AC004872.1-201ENST00000456062 MTRQ99707 1265 aa11.5□□□□□ -0.57
AC004872.1-201ENST00000456062 NUDT18Q6ZVK8 323 aa11.49□□□□□ -0.57
AC004872.1-201ENST00000456062 PAXIP1Q6ZW49 1069 aaPredicted RBP11.49□□□□□ -0.57
AC004872.1-201ENST00000456062 CFAP44Q96MT7 982 aa11.47□□□□□ -0.57
AC004872.1-201ENST00000456062 NPDC1Q9NQX5 325 aaPredicted RBP11.47□□□□□ -0.57
AC004872.1-201ENST00000456062 NECTIN2Q92692 538 aa11.46□□□□□ -0.57
AC004872.1-201ENST00000456062 HDGFP51858 240 aaKnown RBP11.45□□□□□ -0.58
AC004872.1-201ENST00000456062 APLP1P51693 650 aa11.44□□□□□ -0.58
AC004872.1-201ENST00000456062 PPP1R18Q6NYC8 613 aa11.43□□□□□ -0.58
AC004872.1-201ENST00000456062 V9GY48 417 aaPredicted RBP11.43□□□□□ -0.58
AC004872.1-201ENST00000456062 PADI6Q6TGC4 694 aa11.42□□□□□ -0.58
AC004872.1-201ENST00000456062 PRKD2Q9BZL6 878 aa11.42□□□□□ -0.58
AC004872.1-201ENST00000456062 ZNF516Q92618 1163 aa11.41□□□□□ -0.58
AC004872.1-201ENST00000456062 LCE2BO14633 110 aa11.4□□□□□ -0.58
AC004872.1-201ENST00000456062 SLF2Q8IX21 1173 aa11.4□□□□□ -0.58
AC004872.1-201ENST00000456062 GFRA3O60609 400 aa11.39□□□□□ -0.59
AC004872.1-201ENST00000456062 RNF40O75150 1001 aa11.39□□□□□ -0.59
AC004872.1-201ENST00000456062 SWT1Q5T5J6 900 aaKnown RBP11.39□□□□□ -0.59
AC004872.1-201ENST00000456062 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.39□□□□□ -0.59
AC004872.1-201ENST00000456062 EYA1Q99502 592 aa11.38□□□□□ -0.59
AC004872.1-201ENST00000456062 RTN4Q9NQC3 1192 aaKnown RBP11.38□□□□□ -0.59
AC004872.1-201ENST00000456062 NRG2O14511 850 aaPredicted RBP11.37□□□□□ -0.59
AC004872.1-201ENST00000456062 TRAF7Q6Q0C0 670 aa11.35□□□□□ -0.59
AC004872.1-201ENST00000456062 ARHGEF1Q92888 912 aaKnown RBP11.35□□□□□ -0.59
AC004872.1-201ENST00000456062 NKX2-3Q8TAU0 364 aa11.34□□□□□ -0.59
AC004872.1-201ENST00000456062 PRR14Q9BWN1 585 aa11.33□□□□□ -0.6
AC004872.1-201ENST00000456062 SLC4A3P48751 1232 aa11.32□□□□□ -0.6
AC004872.1-201ENST00000456062 TMUB1Q9BVT8 246 aa11.32□□□□□ -0.6
AC004872.1-201ENST00000456062 GGCXP38435 758 aa11.31□□□□□ -0.6
AC004872.1-201ENST00000456062 ZPR1O75312 459 aa11.3□□□□□ -0.6
AC004872.1-201ENST00000456062 MLLT3P42568 568 aaPredicted RBP11.3□□□□□ -0.6
AC004872.1-201ENST00000456062 COPS2P61201 443 aa11.3□□□□□ -0.6
AC004872.1-201ENST00000456062 PTGDRQ13258 359 aa11.29□□□□□ -0.6
AC004872.1-201ENST00000456062 DNAJB2P25686 324 aa11.27□□□□□ -0.61
AC004872.1-201ENST00000456062 KCNV2Q8TDN2 545 aa11.27□□□□□ -0.61
AC004872.1-201ENST00000456062 PCDHB3Q9Y5E6 796 aa11.26□□□□□ -0.61
AC004872.1-201ENST00000456062 TMEM134Q9H6X4 195 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms