RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 NBPF8Q3BBV2 869 aa13.18□□□□□ -0.3
VSIG4-204ENST00000455586 ZNF326Q5BKZ1 582 aaKnown RBP13.18□□□□□ -0.3
VSIG4-204ENST00000455586 DHX29Q7Z478 1369 aaKnown RBP13.17□□□□□ -0.3
VSIG4-204ENST00000455586 NEO1Q92859 1461 aa13.16□□□□□ -0.3
VSIG4-204ENST00000455586 GGT6Q6P531 493 aa13.15□□□□□ -0.3
VSIG4-204ENST00000455586 GLI2P10070 1586 aa13.15□□□□□ -0.3
VSIG4-204ENST00000455586 PLA2R1Q13018 1463 aa13.15□□□□□ -0.3
VSIG4-204ENST00000455586 RGL3Q3MIN7 710 aa13.15□□□□□ -0.3
VSIG4-204ENST00000455586 KDM2AQ9Y2K7 1162 aa13.15□□□□□ -0.3
VSIG4-204ENST00000455586 CFAP74Q9C0B2 1584 aa13.15□□□□□ -0.31
VSIG4-204ENST00000455586 IQGAP3Q86VI3 1631 aa13.14□□□□□ -0.31
VSIG4-204ENST00000455586 KDM5CP41229 1560 aa13.14□□□□□ -0.31
VSIG4-204ENST00000455586 MAGI2Q86UL8 1455 aa13.13□□□□□ -0.31
VSIG4-204ENST00000455586 YEATS2Q9ULM3 1422 aa13.13□□□□□ -0.31
VSIG4-204ENST00000455586 A2MP01023 1474 aa13.13□□□□□ -0.31
VSIG4-204ENST00000455586 MLH3Q9UHC1 1453 aa13.12□□□□□ -0.31
VSIG4-204ENST00000455586 HECW2Q9P2P5 1572 aa13.11□□□□□ -0.31
VSIG4-204ENST00000455586 PPRC1Q5VV67 1664 aaKnown RBP13.11□□□□□ -0.31
VSIG4-204ENST00000455586 ABCA6Q8N139 1617 aa13.11□□□□□ -0.31
VSIG4-204ENST00000455586 DCAF11Q8TEB1 546 aa13.11□□□□□ -0.31
VSIG4-204ENST00000455586 FRMPD1Q5SYB0 1578 aa13.11□□□□□ -0.31
VSIG4-204ENST00000455586 CCDC144AA2RUR9 1427 aa13.1□□□□□ -0.31
VSIG4-204ENST00000455586 DDX10Q13206 875 aaKnown RBP13.1□□□□□ -0.31
VSIG4-204ENST00000455586 EIF4G2P78344 907 aaKnown RBP eCLIP13.09□□□□□ -0.31
VSIG4-204ENST00000455586 RICTORQ6R327 1708 aa13.09□□□□□ -0.31
VSIG4-204ENST00000455586 MROH1Q8NDA8 1641 aa13.09□□□□□ -0.31
VSIG4-204ENST00000455586 KIF13AQ9H1H9 1805 aa13.08□□□□□ -0.31
VSIG4-204ENST00000455586 HSPA5P11021 654 aaKnown RBP13.08□□□□□ -0.31
VSIG4-204ENST00000455586 YTHDC1Q96MU7 727 aaKnown RBP13.08□□□□□ -0.31
VSIG4-204ENST00000455586 COL17A1Q9UMD9 1497 aaPredicted RBP13.08□□□□□ -0.31
VSIG4-204ENST00000455586 KANK1Q14678 1352 aa13.08□□□□□ -0.32
VSIG4-204ENST00000455586 DEPDC5O75140 1603 aa13.07□□□□□ -0.32
VSIG4-204ENST00000455586 E9PCH4 1651 aa13.07□□□□□ -0.32
VSIG4-204ENST00000455586 DIP2CQ9Y2E4 1556 aa13.06□□□□□ -0.32
VSIG4-204ENST00000455586 UHRF1BP1Q6BDS2 1440 aa13.05□□□□□ -0.32
VSIG4-204ENST00000455586 ATP10AO60312 1499 aa13.05□□□□□ -0.32
VSIG4-204ENST00000455586 WASHC2CQ9Y4E1 1318 aa13.05□□□□□ -0.32
VSIG4-204ENST00000455586 TRHP20396 242 aaPredicted RBP13.04□□□□□ -0.32
VSIG4-204ENST00000455586 PRDM15P57071 1507 aaPredicted RBP13.04□□□□□ -0.32
VSIG4-204ENST00000455586 POLR1AO95602 1720 aaPredicted RBP13.04□□□□□ -0.32
VSIG4-204ENST00000455586 VWDEQ8N2E2 1590 aa13.04□□□□□ -0.32
VSIG4-204ENST00000455586 EIF2AK4Q9P2K8 1649 aaKnown RBP13.03□□□□□ -0.32
VSIG4-204ENST00000455586 UGGT1Q9NYU2 1555 aa13.03□□□□□ -0.32
VSIG4-204ENST00000455586 MLECQ14165 292 aa13.03□□□□□ -0.32
VSIG4-204ENST00000455586 SPATA31E1Q6ZUB1 1445 aa13.02□□□□□ -0.32
VSIG4-204ENST00000455586 RALGAPBQ86X10 1494 aa13.02□□□□□ -0.32
VSIG4-204ENST00000455586 CEP152O94986 1710 aa13.02□□□□□ -0.33
VSIG4-204ENST00000455586 C11orf95C9JLR9 678 aaPredicted RBP13.02□□□□□ -0.33
VSIG4-204ENST00000455586 CFAP65Q6ZU64 1925 aaKnown RBP13.02□□□□□ -0.33
VSIG4-204ENST00000455586 PELP1Q8IZL8 1130 aaKnown RBP13.01□□□□□ -0.33
VSIG4-204ENST00000455586 WASHC2AQ641Q2 1341 aa13.01□□□□□ -0.33
VSIG4-204ENST00000455586 SCAF1Q9H7N4 1312 aaKnown RBP13.01□□□□□ -0.33
VSIG4-204ENST00000455586 TET3O43151 1660 aa13.01□□□□□ -0.33
VSIG4-204ENST00000455586 NBPF1Q3BBV0 1214 aa13□□□□□ -0.33
VSIG4-204ENST00000455586 PTPRTO14522 1441 aa12.99□□□□□ -0.33
VSIG4-204ENST00000455586 ANP32CO43423 234 aa12.99□□□□□ -0.33
VSIG4-204ENST00000455586 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
VSIG4-204ENST00000455586 RNF17Q9BXT8 1623 aaKnown RBP12.99□□□□□ -0.33
VSIG4-204ENST00000455586 NPATQ14207 1427 aa12.99□□□□□ -0.33
VSIG4-204ENST00000455586 CARD11Q9BXL7 1154 aa12.98□□□□□ -0.33
VSIG4-204ENST00000455586 CLTCL1P53675 1640 aa12.98□□□□□ -0.33
VSIG4-204ENST00000455586 EFCAB6Q5THR3 1501 aa12.98□□□□□ -0.33
VSIG4-204ENST00000455586 SPHKAPQ2M3C7 1700 aa12.98□□□□□ -0.33
VSIG4-204ENST00000455586 USP47Q96K76 1375 aa12.98□□□□□ -0.33
VSIG4-204ENST00000455586 CCDC7Q96M83 1385 aa12.98□□□□□ -0.33
VSIG4-204ENST00000455586 TRPM2O94759 1503 aa12.97□□□□□ -0.33
VSIG4-204ENST00000455586 ABCC3O15438 1527 aa12.97□□□□□ -0.33
VSIG4-204ENST00000455586 ZMYM4Q5VZL5 1548 aa12.97□□□□□ -0.33
VSIG4-204ENST00000455586 CNTLNQ9NXG0 1405 aa12.97□□□□□ -0.33
VSIG4-204ENST00000455586 CCER2I3L3R5 266 aa12.96□□□□□ -0.33
VSIG4-204ENST00000455586 SIGLEC1Q9BZZ2 1709 aa12.96□□□□□ -0.33
VSIG4-204ENST00000455586 PRAG1Q86YV5 1406 aa12.96□□□□□ -0.34
VSIG4-204ENST00000455586 SENP3Q9H4L4 574 aaPredicted RBP12.96□□□□□ -0.34
VSIG4-204ENST00000455586 FBXO31Q5XUX0 539 aaPredicted RBP12.95□□□□□ -0.34
VSIG4-204ENST00000455586 POLR3GLQ9BT43 218 aa12.95□□□□□ -0.34
VSIG4-204ENST00000455586 DNAJC5Q9H3Z4 198 aa12.95□□□□□ -0.34
VSIG4-204ENST00000455586 ROCK2O75116 1388 aaKnown RBP12.95□□□□□ -0.34
VSIG4-204ENST00000455586 TRPM1Q7Z4N2 1603 aa12.95□□□□□ -0.34
VSIG4-204ENST00000455586 LMTK2Q8IWU2 1503 aa12.94□□□□□ -0.34
VSIG4-204ENST00000455586 NUTM2DQ5VT03 806 aaPredicted RBP12.94□□□□□ -0.34
VSIG4-204ENST00000455586 ST20-MTHFSA0A0A6YYL1 179 aa12.93□□□□□ -0.34
VSIG4-204ENST00000455586 BCORL1Q5H9F3 1711 aa12.92□□□□□ -0.34
VSIG4-204ENST00000455586 LAMC1P11047 1609 aa12.92□□□□□ -0.34
VSIG4-204ENST00000455586 KIF7Q2M1P5 1343 aa12.92□□□□□ -0.34
VSIG4-204ENST00000455586 ARID4BQ4LE39 1312 aaPredicted RBP12.92□□□□□ -0.34
VSIG4-204ENST00000455586 CAMSAP1Q5T5Y3 1602 aa12.91□□□□□ -0.34
VSIG4-204ENST00000455586 GTF3C3Q9Y5Q9 886 aa12.9□□□□□ -0.34
VSIG4-204ENST00000455586 ADGRF5Q8IZF2 1346 aa12.9□□□□□ -0.34
VSIG4-204ENST00000455586 IDI1Q13907 227 aa12.89□□□□□ -0.35
VSIG4-204ENST00000455586 NEURL4Q96JN8 1562 aa12.89□□□□□ -0.35
VSIG4-204ENST00000455586 CNGB1Q14028 1251 aaPredicted RBP12.88□□□□□ -0.35
VSIG4-204ENST00000455586 GPRASP1Q5JY77 1395 aa12.88□□□□□ -0.35
VSIG4-204ENST00000455586 MROH2AA6NES4 1674 aa12.88□□□□□ -0.35
VSIG4-204ENST00000455586 CFAP70Q5T0N1 1121 aa12.87□□□□□ -0.35
VSIG4-204ENST00000455586 PLPPR3Q6T4P5 718 aa12.87□□□□□ -0.35
VSIG4-204ENST00000455586 NOS1P29475 1434 aa12.87□□□□□ -0.35
VSIG4-204ENST00000455586 ARHGEF40Q8TER5 1519 aa12.87□□□□□ -0.35
VSIG4-204ENST00000455586 SYNMO15061 1565 aa12.87□□□□□ -0.35
VSIG4-204ENST00000455586 MADDQ8WXG6 1647 aa12.86□□□□□ -0.35
VSIG4-204ENST00000455586 STAC3Q96MF2 364 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms