RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 EFCAB2Q5VUJ9 269 aa14.81□□□□□ -0.04
DDR1-240ENST00000454612 CCDC7Q96M83 1385 aa14.8□□□□□ -0.04
DDR1-240ENST00000454612 SKAP1Q86WV1 359 aa14.8□□□□□ -0.04
DDR1-240ENST00000454612 USP47Q96K76 1375 aa14.8□□□□□ -0.04
DDR1-240ENST00000454612 UHRF1BP1LA0JNW5 1464 aa14.8□□□□□ -0.04
DDR1-240ENST00000454612 ASXL2Q76L83 1435 aa14.79□□□□□ -0.04
DDR1-240ENST00000454612 ARHGAP5Q13017 1502 aa14.79□□□□□ -0.04
DDR1-240ENST00000454612 ZCCHC11Q5TAX3 1644 aaKnown RBP14.79□□□□□ -0.04
DDR1-240ENST00000454612 PLEKHG5O94827 1062 aa14.79□□□□□ -0.04
DDR1-240ENST00000454612 ADCY10Q96PN6 1610 aa14.78□□□□□ -0.04
DDR1-240ENST00000454612 ROCK1Q13464 1354 aa14.77□□□□□ -0.04
DDR1-240ENST00000454612 GGT6Q6P531 493 aa14.77□□□□□ -0.04
DDR1-240ENST00000454612 CDCA7LQ96GN5 454 aa14.77□□□□□ -0.04
DDR1-240ENST00000454612 EXOC6Q8TAG9 804 aa14.77□□□□□ -0.04
DDR1-240ENST00000454612 PANK3Q9H999 370 aa14.77□□□□□ -0.05
DDR1-240ENST00000454612 GPATCH8Q9UKJ3 1502 aaKnown RBP14.77□□□□□ -0.05
DDR1-240ENST00000454612 ANKRD30AQ9BXX3 1397 aa14.77□□□□□ -0.05
DDR1-240ENST00000454612 RIMBP3CA6NJZ7 1639 aa14.76□□□□□ -0.05
DDR1-240ENST00000454612 RIMBP3BA6NNM3 1639 aa14.76□□□□□ -0.05
DDR1-240ENST00000454612 RIMBP3Q9UFD9 1639 aa14.76□□□□□ -0.05
DDR1-240ENST00000454612 WDR7Q9Y4E6 1490 aa14.76□□□□□ -0.05
DDR1-240ENST00000454612 PPM1GO15355 546 aaPredicted RBP14.76□□□□□ -0.05
DDR1-240ENST00000454612 FRAT1Q92837 279 aaPredicted RBP14.76□□□□□ -0.05
DDR1-240ENST00000454612 RPRD2Q5VT52 1461 aaKnown RBP14.76□□□□□ -0.05
DDR1-240ENST00000454612 FAM69CQ0P6D2 419 aa14.75□□□□□ -0.05
DDR1-240ENST00000454612 CNTLNQ9NXG0 1405 aa14.75□□□□□ -0.05
DDR1-240ENST00000454612 SLC24A1O60721 1099 aa14.75□□□□□ -0.05
DDR1-240ENST00000454612 NUDCQ9Y266 331 aa14.74□□□□□ -0.05
DDR1-240ENST00000454612 RCAN3Q9UKA8 241 aa14.73□□□□□ -0.05
DDR1-240ENST00000454612 NCOA1Q15788 1441 aa14.73□□□□□ -0.05
DDR1-240ENST00000454612 TRHP20396 242 aaPredicted RBP14.73□□□□□ -0.05
DDR1-240ENST00000454612 CAMSAP2Q08AD1 1489 aa14.73□□□□□ -0.05
DDR1-240ENST00000454612 STAG3Q9UJ98 1225 aa14.73□□□□□ -0.05
DDR1-240ENST00000454612 GLIPR1L2Q4G1C9 344 aa14.73□□□□□ -0.05
DDR1-240ENST00000454612 TEX14Q8IWB6 1497 aa14.72□□□□□ -0.05
DDR1-240ENST00000454612 ITSN2Q9NZM3 1697 aa14.72□□□□□ -0.05
DDR1-240ENST00000454612 DNMT1P26358 1616 aaKnown RBP14.72□□□□□ -0.05
DDR1-240ENST00000454612 KIF3BO15066 747 aa14.72□□□□□ -0.05
DDR1-240ENST00000454612 SLC4A3P48751 1232 aa14.72□□□□□ -0.05
DDR1-240ENST00000454612 STK26Q9P289 416 aa14.71□□□□□ -0.05
DDR1-240ENST00000454612 TMF1P82094 1093 aa14.71□□□□□ -0.06
DDR1-240ENST00000454612 NOP58Q9Y2X3 529 aaKnown RBP14.71□□□□□ -0.06
DDR1-240ENST00000454612 PZPP20742 1482 aa14.7□□□□□ -0.06
DDR1-240ENST00000454612 AFAP1Q8N556 730 aa14.7□□□□□ -0.06
DDR1-240ENST00000454612 RRP7AQ9Y3A4 280 aaKnown RBP14.7□□□□□ -0.06
DDR1-240ENST00000454612 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.69□□□□□ -0.066e-7■■■■□ 21.9
DDR1-240ENST00000454612 ABCC10Q5T3U5 1492 aa14.68□□□□□ -0.06
DDR1-240ENST00000454612 TTC37Q6PGP7 1564 aa14.68□□□□□ -0.06
DDR1-240ENST00000454612 ZBED9Q6R2W3 1325 aa14.68□□□□□ -0.06
DDR1-240ENST00000454612 SPATA31E1Q6ZUB1 1445 aa14.67□□□□□ -0.06
DDR1-240ENST00000454612 FANCIQ9NVI1 1328 aa14.67□□□□□ -0.06
DDR1-240ENST00000454612 CD109Q6YHK3 1445 aa14.67□□□□□ -0.06
DDR1-240ENST00000454612 MLECQ14165 292 aa14.66□□□□□ -0.06
DDR1-240ENST00000454612 PLCH2O75038 1416 aa14.65□□□□□ -0.06
DDR1-240ENST00000454612 RSPH4AQ5TD94 716 aa14.65□□□□□ -0.06
DDR1-240ENST00000454612 BCL2L13Q9BXK5 485 aa14.65□□□□□ -0.06
DDR1-240ENST00000454612 TRAK1Q9UPV9 953 aa14.65□□□□□ -0.06
DDR1-240ENST00000454612 SPAG9O60271 1321 aaKnown RBP14.65□□□□□ -0.06
DDR1-240ENST00000454612 ANKRD50Q9ULJ7 1429 aa14.65□□□□□ -0.06
DDR1-240ENST00000454612 KIAA1107Q9UPP5 1409 aa14.65□□□□□ -0.06
DDR1-240ENST00000454612 KTN1Q86UP2 1357 aaKnown RBP14.65□□□□□ -0.07
DDR1-240ENST00000454612 PAK3O75914 559 aaPredicted RBP14.64□□□□□ -0.07
DDR1-240ENST00000454612 CLUAP1Q96AJ1 413 aa14.64□□□□□ -0.07
DDR1-240ENST00000454612 KIF15Q9NS87 1388 aa14.64□□□□□ -0.07
DDR1-240ENST00000454612 FANCAO15360 1455 aa14.64□□□□□ -0.07
DDR1-240ENST00000454612 CDC42BPAQ5VT25 1732 aa14.63□□□□□ -0.07
DDR1-240ENST00000454612 U2SURPO15042 1029 aaKnown RBP14.63□□□□□ -0.07
DDR1-240ENST00000454612 NLRP13Q86W25 1043 aa14.63□□□□□ -0.07
DDR1-240ENST00000454612 C9orf84Q5VXU9 1444 aa14.63□□□□□ -0.07
DDR1-240ENST00000454612 MYO5CQ9NQX4 1742 aa14.62□□□□□ -0.07
DDR1-240ENST00000454612 SPRYD3Q8NCJ5 442 aa14.62□□□□□ -0.07
DDR1-240ENST00000454612 SYCP2Q9BX26 1530 aa14.62□□□□□ -0.07
DDR1-240ENST00000454612 NEFMP07197 916 aa14.62□□□□□ -0.07
DDR1-240ENST00000454612 SOX12O15370 315 aa14.61□□□□□ -0.07
DDR1-240ENST00000454612 PLEKHH2Q8IVE3 1493 aa14.61□□□□□ -0.07
DDR1-240ENST00000454612 CRBNQ96SW2 442 aa14.61□□□□□ -0.07
DDR1-240ENST00000454612 SCAPERQ9BY12 1400 aa14.61□□□□□ -0.07
DDR1-240ENST00000454612 CCDC141Q6ZP82 1450 aa14.6□□□□□ -0.07
DDR1-240ENST00000454612 ADGRL1O94910 1474 aa14.6□□□□□ -0.07
DDR1-240ENST00000454612 PNISRQ8TF01 805 aaKnown RBP14.6□□□□□ -0.07
DDR1-240ENST00000454612 PREX2Q70Z35 1606 aa14.59□□□□□ -0.07
DDR1-240ENST00000454612 RALBP1Q15311 655 aa14.59□□□□□ -0.07
DDR1-240ENST00000454612 ADAMTS8Q9UP79 889 aa14.59□□□□□ -0.07
DDR1-240ENST00000454612 MYBBP1AQ9BQG0 1328 aaKnown RBP14.59□□□□□ -0.07
DDR1-240ENST00000454612 CCDC144AA2RUR9 1427 aa14.59□□□□□ -0.07
DDR1-240ENST00000454612 APAF1O14727 1248 aa14.58□□□□□ -0.08
DDR1-240ENST00000454612 RAPGEF3O95398 923 aa14.58□□□□□ -0.08
DDR1-240ENST00000454612 TMEM132EQ6IEE7 984 aa14.58□□□□□ -0.08
DDR1-240ENST00000454612 DHX29Q7Z478 1369 aaKnown RBP14.57□□□□□ -0.08
DDR1-240ENST00000454612 RRP1P56182 461 aaKnown RBP14.57□□□□□ -0.08
DDR1-240ENST00000454612 ADGRL2O95490 1459 aa14.56□□□□□ -0.08
DDR1-240ENST00000454612 SAMD9LQ8IVG5 1584 aa14.56□□□□□ -0.08
DDR1-240ENST00000454612 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.56□□□□□ -0.08
DDR1-240ENST00000454612 CDC42BPBQ9Y5S2 1711 aa14.56□□□□□ -0.08
DDR1-240ENST00000454612 MORC1Q86VD1 984 aa14.55□□□□□ -0.08
DDR1-240ENST00000454612 MBD5Q9P267 1494 aa14.55□□□□□ -0.08
DDR1-240ENST00000454612 CFAP70Q5T0N1 1121 aa14.55□□□□□ -0.08
DDR1-240ENST00000454612 TRAPPC8Q9Y2L5 1435 aa14.54□□□□□ -0.08
DDR1-240ENST00000454612 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
DDR1-240ENST00000454612 SRPK2P78362 688 aaKnown RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms