RNA–Protein interactions for RNA: ENST00000454258.2

AC006539.3-201, humanhuman

BASIC

Gene AC006539.3, Length 129 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC006539.3-201ENST00000454258 RPRD2Q5VT52 1461 aaKnown RBP4.55□□□□□ -1.68
AC006539.3-201ENST00000454258 BRD4O60885 1362 aaPredicted RBP4.54□□□□□ -1.68
AC006539.3-201ENST00000454258 CARMIL1Q5VZK9 1371 aa4.54□□□□□ -1.68
AC006539.3-201ENST00000454258 NINLQ9Y2I6 1382 aa4.54□□□□□ -1.68
AC006539.3-201ENST00000454258 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.54□□□□□ -1.68
AC006539.3-201ENST00000454258 UGGT2Q9NYU1 1516 aa4.54□□□□□ -1.68
AC006539.3-201ENST00000454258 SNAPC4Q5SXM2 1469 aa4.54□□□□□ -1.68
AC006539.3-201ENST00000454258 TEX14Q8IWB6 1497 aa4.54□□□□□ -1.68
AC006539.3-201ENST00000454258 RIOK3O14730 519 aaKnown RBP4.53□□□□□ -1.68
AC006539.3-201ENST00000454258 GTPBP6O43824 516 aaPredicted RBP4.53□□□□□ -1.68
AC006539.3-201ENST00000454258 PTMSP20962 102 aa4.53□□□□□ -1.68
AC006539.3-201ENST00000454258 VIRMAQ69YN4 1812 aaKnown RBP4.53□□□□□ -1.68
AC006539.3-201ENST00000454258 DNMBPQ6XZF7 1577 aa4.53□□□□□ -1.69
AC006539.3-201ENST00000454258 KIF15Q9NS87 1388 aa4.53□□□□□ -1.69
AC006539.3-201ENST00000454258 ABCA10Q8WWZ4 1543 aa4.52□□□□□ -1.69
AC006539.3-201ENST00000454258 ADGBQ8N7X0 1667 aa4.52□□□□□ -1.69
AC006539.3-201ENST00000454258 ITSN2Q9NZM3 1697 aa4.52□□□□□ -1.69
AC006539.3-201ENST00000454258 MRC2Q9UBG0 1479 aa4.52□□□□□ -1.69
AC006539.3-201ENST00000454258 RRP9O43818 475 aaKnown RBP4.52□□□□□ -1.69
AC006539.3-201ENST00000454258 NUBP1P53384 320 aa4.52□□□□□ -1.69
AC006539.3-201ENST00000454258 BECN1Q14457 450 aa4.52□□□□□ -1.69
AC006539.3-201ENST00000454258 RALBP1Q15311 655 aa4.52□□□□□ -1.69
AC006539.3-201ENST00000454258 GOLGA6L2Q8N9W4 650 aaPredicted RBP4.52□□□□□ -1.69
AC006539.3-201ENST00000454258 KCNH8Q96L42 1107 aa4.52□□□□□ -1.69
AC006539.3-201ENST00000454258 GRIN2BQ13224 1484 aa4.51□□□□□ -1.69
AC006539.3-201ENST00000454258 EIF5BO60841 1220 aaKnown RBP4.51□□□□□ -1.69
AC006539.3-201ENST00000454258 AAMPQ13685 434 aa4.51□□□□□ -1.69
AC006539.3-201ENST00000454258 DCAF8Q5TAQ9 597 aa4.51□□□□□ -1.69
AC006539.3-201ENST00000454258 B4GALNT3Q6L9W6 998 aa4.51□□□□□ -1.69
AC006539.3-201ENST00000454258 PKNOX2Q96KN3 472 aa4.51□□□□□ -1.69
AC006539.3-201ENST00000454258 SCAPERQ9BY12 1400 aa4.51□□□□□ -1.69
AC006539.3-201ENST00000454258 IGF1RP08069 1367 aa4.51□□□□□ -1.69
AC006539.3-201ENST00000454258 LRPPRCP42704 1394 aaKnown RBP4.51□□□□□ -1.69
AC006539.3-201ENST00000454258 ANKRD30AQ9BXX3 1397 aa4.51□□□□□ -1.69
AC006539.3-201ENST00000454258 LAMC1P11047 1609 aa4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 DNMT1P26358 1616 aaKnown RBP4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 GAPVD1Q14C86 1478 aa4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 RALGAPBQ86X10 1494 aa4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 MBD5Q9P267 1494 aa4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 FHOD3Q2V2M9 1422 aa4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 SPATA31E1Q6ZUB1 1445 aa4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 STK25O00506 426 aa4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 HSPA5P11021 654 aaKnown RBP4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 LMOD2Q6P5Q4 547 aa4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 NGEFQ8N5V2 710 aa4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 BACH2Q9BYV9 841 aa4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 E9PCH4 1651 aa4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 EIF2AK4Q9P2K8 1649 aaKnown RBP4.5□□□□□ -1.69
AC006539.3-201ENST00000454258 CAMSAP2Q08AD1 1489 aa4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 UHRF1BP1Q6BDS2 1440 aa4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 VGFO15240 615 aaPredicted RBP4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 NCLP19338 710 aaKnown RBP4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 RRP1P56182 461 aaKnown RBP4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 CENPQQ7L2Z9 268 aaPredicted RBP4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 MTERF4Q7Z6M4 381 aaKnown RBP4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 SIN3AQ96ST3 1273 aa4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 MAP7D2Q96T17 732 aa4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 UPF2Q9HAU5 1272 aaKnown RBP4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 ANO8Q9HCE9 1232 aaPredicted RBP4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 SALL2Q9Y467 1007 aaPredicted RBP4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 CLASP1Q7Z460 1538 aa4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 NESP48681 1621 aa4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 FANCD2Q9BXW9 1451 aa4.49□□□□□ -1.69
AC006539.3-201ENST00000454258 KDM5CP41229 1560 aa4.48□□□□□ -1.69
AC006539.3-201ENST00000454258 MYBBP1AQ9BQG0 1328 aaKnown RBP4.48□□□□□ -1.69
AC006539.3-201ENST00000454258 MAPK8IP3Q9UPT6 1336 aa4.48□□□□□ -1.69
AC006539.3-201ENST00000454258 PAK3O75914 559 aaPredicted RBP4.48□□□□□ -1.69
AC006539.3-201ENST00000454258 PDE4AP27815 886 aa4.48□□□□□ -1.69
AC006539.3-201ENST00000454258 FAM212AQ96EL1 285 aa4.48□□□□□ -1.69
AC006539.3-201ENST00000454258 ZMYND15Q9H091 742 aa4.48□□□□□ -1.69
AC006539.3-201ENST00000454258 C1orf115Q9H7X2 142 aa4.48□□□□□ -1.69
AC006539.3-201ENST00000454258 SHANK2Q9UPX8 1470 aa4.48□□□□□ -1.69
AC006539.3-201ENST00000454258 CENPJQ9HC77 1338 aaPredicted RBP4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 BLMP54132 1417 aaPredicted RBP4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 WDR62O43379 1518 aa4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 KDM5DQ9BY66 1539 aa4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 TPM2P07951 284 aa4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 FAM161AQ3B820 660 aa4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 NLRP13Q86W25 1043 aa4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 FAM9BQ8IZU0 186 aa4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 TMC1Q8TDI8 760 aa4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 PNNQ9H307 717 aaKnown RBP4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 RYDENQ9NUL5 291 aaKnown RBP4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 RCAN3Q9UKA8 241 aa4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 USP47Q96K76 1375 aa4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 PLXNC1O60486 1568 aa4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 CROCC2H7BZ55 1655 aa4.47□□□□□ -1.69
AC006539.3-201ENST00000454258 KIF7Q2M1P5 1343 aa4.46□□□□□ -1.69
AC006539.3-201ENST00000454258 ADGRL2O95490 1459 aa4.46□□□□□ -1.7
AC006539.3-201ENST00000454258 DHX29Q7Z478 1369 aaKnown RBP4.46□□□□□ -1.7
AC006539.3-201ENST00000454258 ANKRD30BQ9BXX2 1392 aa4.46□□□□□ -1.7
AC006539.3-201ENST00000454258 HSP90AA1P07900 732 aaKnown RBP4.46□□□□□ -1.7
AC006539.3-201ENST00000454258 CHRM1P11229 460 aaPredicted RBP4.46□□□□□ -1.7
AC006539.3-201ENST00000454258 IRX6P78412 446 aaPredicted RBP4.46□□□□□ -1.7
AC006539.3-201ENST00000454258 IL27Q8NEV9 243 aa4.46□□□□□ -1.7
AC006539.3-201ENST00000454258 SPDYE1Q8NFV5 336 aaPredicted RBP4.46□□□□□ -1.7
AC006539.3-201ENST00000454258 ZC3H15Q8WU90 426 aaKnown RBP4.46□□□□□ -1.7
AC006539.3-201ENST00000454258 SGIP1Q9BQI5 828 aa4.46□□□□□ -1.7
AC006539.3-201ENST00000454258 STK24Q9Y6E0 443 aa4.46□□□□□ -1.7
AC006539.3-201ENST00000454258 KIAA1107Q9UPP5 1409 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms