RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 KDM6BO15054 1643 aa17.85■□□□□ 0.45
UBE2D3-210ENST00000453744 GRIN2BQ13224 1484 aa17.84■□□□□ 0.45
UBE2D3-210ENST00000453744 HSP90AA1P07900 732 aaKnown RBP17.84■□□□□ 0.45
UBE2D3-210ENST00000453744 CHGAP10645 457 aaKnown RBP17.83■□□□□ 0.45
UBE2D3-210ENST00000453744 BCL2L13Q9BXK5 485 aa17.83■□□□□ 0.45
UBE2D3-210ENST00000453744 ANKRD50Q9ULJ7 1429 aa17.83■□□□□ 0.45
UBE2D3-210ENST00000453744 KDM5BQ9UGL1 1544 aa17.83■□□□□ 0.44
UBE2D3-210ENST00000453744 UGGT2Q9NYU1 1516 aa17.82■□□□□ 0.44
UBE2D3-210ENST00000453744 BCAR3O75815 825 aa17.82■□□□□ 0.44
UBE2D3-210ENST00000453744 SPATA31E1Q6ZUB1 1445 aa17.82■□□□□ 0.44
UBE2D3-210ENST00000453744 POGKQ9P215 609 aa17.81■□□□□ 0.44
UBE2D3-210ENST00000453744 RRP7AQ9Y3A4 280 aaKnown RBP17.81■□□□□ 0.44
UBE2D3-210ENST00000453744 PRG4Q92954 1404 aaPredicted RBP17.8■□□□□ 0.44
UBE2D3-210ENST00000453744 DENND4BO75064 1496 aaPredicted RBP17.79■□□□□ 0.44
UBE2D3-210ENST00000453744 GLIPR1L2Q4G1C9 344 aa17.79■□□□□ 0.44
UBE2D3-210ENST00000453744 PANK1Q8TE04 598 aa17.79■□□□□ 0.44
UBE2D3-210ENST00000453744 TEX14Q8IWB6 1497 aa17.78■□□□□ 0.44
UBE2D3-210ENST00000453744 WASHC2CQ9Y4E1 1318 aa17.77■□□□□ 0.44
UBE2D3-210ENST00000453744 ROCK1Q13464 1354 aa17.77■□□□□ 0.43
UBE2D3-210ENST00000453744 L1TD1Q5T7N2 865 aaKnown RBP17.77■□□□□ 0.43
UBE2D3-210ENST00000453744 DNMBPQ6XZF7 1577 aa17.77■□□□□ 0.43
UBE2D3-210ENST00000453744 MAGI3Q5TCQ9 1506 aa17.76■□□□□ 0.43
UBE2D3-210ENST00000453744 PRDM2Q13029 1718 aa17.76■□□□□ 0.43
UBE2D3-210ENST00000453744 CCDC144AA2RUR9 1427 aa17.76■□□□□ 0.43
UBE2D3-210ENST00000453744 RSPH6AQ9H0K4 717 aa17.76■□□□□ 0.43
UBE2D3-210ENST00000453744 PNNQ9H307 717 aaKnown RBP17.75■□□□□ 0.43
UBE2D3-210ENST00000453744 THOC2Q8NI27 1593 aaKnown RBP17.74■□□□□ 0.43
UBE2D3-210ENST00000453744 MFAP1P55081 439 aaKnown RBP17.74■□□□□ 0.43
UBE2D3-210ENST00000453744 FTSJ3Q8IY81 847 aaKnown RBP17.73■□□□□ 0.43
UBE2D3-210ENST00000453744 PPP2R1AP30153 589 aa17.73■□□□□ 0.43
UBE2D3-210ENST00000453744 CDCA8Q53HL2 280 aa17.73■□□□□ 0.43
UBE2D3-210ENST00000453744 TRIM44Q96DX7 344 aaPredicted RBP17.73■□□□□ 0.43
UBE2D3-210ENST00000453744 DNAJC5BQ9UF47 199 aa17.73■□□□□ 0.43
UBE2D3-210ENST00000453744 CENPJQ9HC77 1338 aaPredicted RBP17.73■□□□□ 0.43
UBE2D3-210ENST00000453744 GOLGA6L3A6NEY3 463 aa17.72■□□□□ 0.43
UBE2D3-210ENST00000453744 LRPPRCP42704 1394 aaKnown RBP17.72■□□□□ 0.43
UBE2D3-210ENST00000453744 C8orf34Q49A92 452 aa17.72■□□□□ 0.43
UBE2D3-210ENST00000453744 HECW1Q76N89 1606 aa17.71■□□□□ 0.43
UBE2D3-210ENST00000453744 DUSP27Q5VZP5 1158 aa17.7■□□□□ 0.42
UBE2D3-210ENST00000453744 CUL7Q14999 1698 aa17.7■□□□□ 0.42
UBE2D3-210ENST00000453744 TCOF1Q13428 1488 aaKnown RBP17.69■□□□□ 0.42
UBE2D3-210ENST00000453744 FOXD4L1Q9NU39 408 aa17.67■□□□□ 0.42
UBE2D3-210ENST00000453744 FAM43AQ8N2R8 423 aa17.67■□□□□ 0.42
UBE2D3-210ENST00000453744 CC2D2AQ9P2K1 1620 aa17.66■□□□□ 0.42
UBE2D3-210ENST00000453744 IGHDP01880 384 aa17.66■□□□□ 0.42
UBE2D3-210ENST00000453744 JPH4Q96JJ6 628 aa17.66■□□□□ 0.42
UBE2D3-210ENST00000453744 CTTNBP2Q8WZ74 1663 aa17.66■□□□□ 0.42
UBE2D3-210ENST00000453744 E9PSI1 815 aa17.65■□□□□ 0.42
UBE2D3-210ENST00000453744 PER1O15534 1290 aaPredicted RBP17.65■□□□□ 0.42
UBE2D3-210ENST00000453744 DISP3Q9P2K9 1392 aa17.65■□□□□ 0.42
UBE2D3-210ENST00000453744 PZPP20742 1482 aa17.65■□□□□ 0.42
UBE2D3-210ENST00000453744 SEC24BO95487 1268 aa17.64■□□□□ 0.42
UBE2D3-210ENST00000453744 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.42
UBE2D3-210ENST00000453744 ANP32BQ92688 251 aaKnown RBP17.64■□□□□ 0.41
UBE2D3-210ENST00000453744 CGNL1Q0VF96 1302 aa17.64■□□□□ 0.41
UBE2D3-210ENST00000453744 MAPK8IP3Q9UPT6 1336 aa17.64■□□□□ 0.41
UBE2D3-210ENST00000453744 MORC1Q86VD1 984 aa17.64■□□□□ 0.41
UBE2D3-210ENST00000453744 HSCBQ8IWL3 235 aa17.64■□□□□ 0.41
UBE2D3-210ENST00000453744 NCLP19338 710 aaKnown RBP17.63■□□□□ 0.41
UBE2D3-210ENST00000453744 URB2Q14146 1524 aaKnown RBP17.63■□□□□ 0.41
UBE2D3-210ENST00000453744 SLFN5Q08AF3 891 aa17.63■□□□□ 0.41
UBE2D3-210ENST00000453744 PARD3Q8TEW0 1356 aa17.63■□□□□ 0.41
UBE2D3-210ENST00000453744 CAMSAP2Q08AD1 1489 aa17.62■□□□□ 0.41
UBE2D3-210ENST00000453744 HSP90AB1P08238 724 aaKnown RBP17.62■□□□□ 0.41
UBE2D3-210ENST00000453744 PMFBP1Q8TBY8 1022 aa17.62■□□□□ 0.41
UBE2D3-210ENST00000453744 RWDD1Q9H446 243 aaPredicted RBP17.62■□□□□ 0.41
UBE2D3-210ENST00000453744 C9orf84Q5VXU9 1444 aa17.61■□□□□ 0.41
UBE2D3-210ENST00000453744 U2SURPO15042 1029 aaKnown RBP17.61■□□□□ 0.41
UBE2D3-210ENST00000453744 PLEKHH1Q9ULM0 1364 aa17.6■□□□□ 0.41
UBE2D3-210ENST00000453744 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
UBE2D3-210ENST00000453744 TROQ12816 1431 aaPredicted RBP17.6■□□□□ 0.41
UBE2D3-210ENST00000453744 MYH16Q9H6N6 1097 aa17.6■□□□□ 0.41
UBE2D3-210ENST00000453744 PDZRN3Q9UPQ7 1066 aa17.59■□□□□ 0.41
UBE2D3-210ENST00000453744 KDM2BQ8NHM5 1336 aa17.59■□□□□ 0.41
UBE2D3-210ENST00000453744 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.41
UBE2D3-210ENST00000453744 ERBINQ96RT1 1412 aa17.58■□□□□ 0.4
UBE2D3-210ENST00000453744 HSP90AA2PQ14568 343 aaPredicted RBP17.58■□□□□ 0.4
UBE2D3-210ENST00000453744 RALGAPBQ86X10 1494 aa17.58■□□□□ 0.4
UBE2D3-210ENST00000453744 UBE2Q2Q8WVN8 375 aa17.58■□□□□ 0.4
UBE2D3-210ENST00000453744 U2AF1L5P0DN76 240 aaPredicted RBP17.57■□□□□ 0.4
UBE2D3-210ENST00000453744 U2AF1Q01081 240 aaKnown RBP eCLIP17.57■□□□□ 0.42e-12■□□□□ 11.1
UBE2D3-210ENST00000453744 IQGAP2Q13576 1575 aa17.57■□□□□ 0.4
UBE2D3-210ENST00000453744 BCORL1Q5H9F3 1711 aa17.57■□□□□ 0.4
UBE2D3-210ENST00000453744 GCC2Q8IWJ2 1684 aa17.57■□□□□ 0.4
UBE2D3-210ENST00000453744 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
UBE2D3-210ENST00000453744 ARID3AQ99856 593 aa17.56■□□□□ 0.4
UBE2D3-210ENST00000453744 SAFB2Q14151 953 aaKnown RBP eCLIP17.55■□□□□ 0.4
UBE2D3-210ENST00000453744 TESK2Q96S53 571 aa17.55■□□□□ 0.4
UBE2D3-210ENST00000453744 PLB1Q6P1J6 1458 aa17.55■□□□□ 0.4
UBE2D3-210ENST00000453744 PANK2Q9BZ23 570 aa17.55■□□□□ 0.4
UBE2D3-210ENST00000453744 CARMIL2Q6F5E8 1435 aa17.54■□□□□ 0.4
UBE2D3-210ENST00000453744 SMC4Q9NTJ3 1288 aa17.54■□□□□ 0.4
UBE2D3-210ENST00000453744 TRAK2O60296 914 aa17.54■□□□□ 0.4
UBE2D3-210ENST00000453744 TBC1D2Q9BYX2 928 aa17.53■□□□□ 0.4
UBE2D3-210ENST00000453744 RRAGDQ9NQL2 400 aaPredicted RBP17.53■□□□□ 0.4
UBE2D3-210ENST00000453744 C22orf23Q9BZE7 217 aa17.53■□□□□ 0.4
UBE2D3-210ENST00000453744 TNNQ9UQP3 1299 aa17.53■□□□□ 0.4
UBE2D3-210ENST00000453744 ZBTB7CA1YPR0 619 aa17.52■□□□□ 0.4
UBE2D3-210ENST00000453744 SAMD9Q5K651 1589 aa17.52■□□□□ 0.4
UBE2D3-210ENST00000453744 CHMP5Q9NZZ3 219 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms