RNA–Protein interactions for RNA: ENST00000452837.6

THUMPD3-206, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-206ENST00000452837 NBPF1Q3BBV0 1214 aa16.88■□□□□ 0.29
THUMPD3-206ENST00000452837 TSPY4P0CV99 314 aa16.87■□□□□ 0.29
THUMPD3-206ENST00000452837 TSPY10P0CW01 314 aa16.87■□□□□ 0.29
THUMPD3-206ENST00000452837 RALBP1Q15311 655 aa16.87■□□□□ 0.29
THUMPD3-206ENST00000452837 IPO9Q96P70 1041 aaKnown RBP16.87■□□□□ 0.29
THUMPD3-206ENST00000452837 MAGI1Q96QZ7 1491 aaPredicted RBP16.86■□□□□ 0.29
THUMPD3-206ENST00000452837 CDCA7LQ96GN5 454 aa16.86■□□□□ 0.29
THUMPD3-206ENST00000452837 RGL3Q3MIN7 710 aa16.86■□□□□ 0.29
THUMPD3-206ENST00000452837 PTPRGP23470 1445 aa16.86■□□□□ 0.29
THUMPD3-206ENST00000452837 SYNJ2O15056 1496 aa16.86■□□□□ 0.29
THUMPD3-206ENST00000452837 SHANK2Q9UPX8 1470 aa16.86■□□□□ 0.29
THUMPD3-206ENST00000452837 KDM5DQ9BY66 1539 aa16.85■□□□□ 0.29
THUMPD3-206ENST00000452837 CARMIL2Q6F5E8 1435 aa16.85■□□□□ 0.29
THUMPD3-206ENST00000452837 RCAN3Q9UKA8 241 aa16.84■□□□□ 0.29
THUMPD3-206ENST00000452837 ANP32AP39687 249 aaKnown RBP16.84■□□□□ 0.29
THUMPD3-206ENST00000452837 E9PCH4 1651 aa16.84■□□□□ 0.29
THUMPD3-206ENST00000452837 PER1O15534 1290 aaPredicted RBP16.83■□□□□ 0.29
THUMPD3-206ENST00000452837 ABCA8O94911 1581 aa16.83■□□□□ 0.29
THUMPD3-206ENST00000452837 PARD3Q8TEW0 1356 aa16.82■□□□□ 0.28
THUMPD3-206ENST00000452837 NUP160Q12769 1436 aa16.82■□□□□ 0.28
THUMPD3-206ENST00000452837 NLRP13Q86W25 1043 aa16.81■□□□□ 0.28
THUMPD3-206ENST00000452837 SKAP1Q86WV1 359 aa16.81■□□□□ 0.28
THUMPD3-206ENST00000452837 PRAG1Q86YV5 1406 aa16.81■□□□□ 0.28
THUMPD3-206ENST00000452837 CC2D1BQ5T0F9 858 aaKnown RBP16.81■□□□□ 0.28
THUMPD3-206ENST00000452837 PLIN1O60240 522 aa16.8■□□□□ 0.28
THUMPD3-206ENST00000452837 NPM2Q86SE8 214 aaKnown RBP16.8■□□□□ 0.28
THUMPD3-206ENST00000452837 FAM135AQ9P2D6 1515 aa16.8■□□□□ 0.28
THUMPD3-206ENST00000452837 ZBTB47Q9UFB7 747 aaPredicted RBP16.79■□□□□ 0.28
THUMPD3-206ENST00000452837 KTN1Q86UP2 1357 aaKnown RBP16.79■□□□□ 0.28
THUMPD3-206ENST00000452837 DISP3Q9P2K9 1392 aa16.79■□□□□ 0.28
THUMPD3-206ENST00000452837 MYT1LQ9UL68 1186 aa16.79■□□□□ 0.28
THUMPD3-206ENST00000452837 PLA2R1Q13018 1463 aa16.78■□□□□ 0.28
THUMPD3-206ENST00000452837 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.78■□□□□ 0.282e-6■■□□□ 13.3
THUMPD3-206ENST00000452837 TESK2Q96S53 571 aa16.77■□□□□ 0.27
THUMPD3-206ENST00000452837 TRPM1Q7Z4N2 1603 aa16.76■□□□□ 0.27
THUMPD3-206ENST00000452837 CCDC144AA2RUR9 1427 aa16.76■□□□□ 0.27
THUMPD3-206ENST00000452837 SAMD9LQ8IVG5 1584 aa16.75■□□□□ 0.27
THUMPD3-206ENST00000452837 A2MP01023 1474 aa16.75■□□□□ 0.27
THUMPD3-206ENST00000452837 PDE4AP27815 886 aa16.75■□□□□ 0.27
THUMPD3-206ENST00000452837 PANK3Q9H999 370 aa16.75■□□□□ 0.27
THUMPD3-206ENST00000452837 ERCC6Q03468 1493 aa16.74■□□□□ 0.27
THUMPD3-206ENST00000452837 ARHGEF5Q12774 1597 aa16.74■□□□□ 0.27
THUMPD3-206ENST00000452837 CCDC141Q6ZP82 1450 aa16.73■□□□□ 0.27
THUMPD3-206ENST00000452837 COL17A1Q9UMD9 1497 aaPredicted RBP16.72■□□□□ 0.27
THUMPD3-206ENST00000452837 TCERG1O14776 1098 aaKnown RBP16.71■□□□□ 0.27
THUMPD3-206ENST00000452837 PDE3BQ13370 1112 aa16.71■□□□□ 0.27
THUMPD3-206ENST00000452837 GPRASP1Q5JY77 1395 aa16.71■□□□□ 0.27
THUMPD3-206ENST00000452837 CRBNQ96SW2 442 aa16.71■□□□□ 0.26
THUMPD3-206ENST00000452837 BACH2Q9BYV9 841 aa16.71■□□□□ 0.26
THUMPD3-206ENST00000452837 C20orf194Q5TEA3 1177 aa16.7■□□□□ 0.26
THUMPD3-206ENST00000452837 CDC42BPBQ9Y5S2 1711 aa16.7■□□□□ 0.26
THUMPD3-206ENST00000452837 SYCP2Q9BX26 1530 aa16.69■□□□□ 0.26
THUMPD3-206ENST00000452837 LAS1LQ9Y4W2 734 aaKnown RBP16.68■□□□□ 0.26
THUMPD3-206ENST00000452837 BLMP54132 1417 aaPredicted RBP16.68■□□□□ 0.26
THUMPD3-206ENST00000452837 ERBINQ96RT1 1412 aa16.68■□□□□ 0.26
THUMPD3-206ENST00000452837 PLEKHH2Q8IVE3 1493 aa16.67■□□□□ 0.26
THUMPD3-206ENST00000452837 PRDM15P57071 1507 aaPredicted RBP16.67■□□□□ 0.26
THUMPD3-206ENST00000452837 ADAMTS8Q9UP79 889 aa16.66■□□□□ 0.26
THUMPD3-206ENST00000452837 PREX2Q70Z35 1606 aa16.65■□□□□ 0.26
THUMPD3-206ENST00000452837 RTL5Q5HYW3 569 aaPredicted RBP16.65■□□□□ 0.26
THUMPD3-206ENST00000452837 MS4A1P11836 297 aa16.63■□□□□ 0.25
THUMPD3-206ENST00000452837 TMF1P82094 1093 aa16.63■□□□□ 0.25
THUMPD3-206ENST00000452837 UNC13BO14795 1591 aa16.62■□□□□ 0.25
THUMPD3-206ENST00000452837 TTC37Q6PGP7 1564 aa16.62■□□□□ 0.25
THUMPD3-206ENST00000452837 MAGI2Q86UL8 1455 aa16.62■□□□□ 0.25
THUMPD3-206ENST00000452837 WASHC2CQ9Y4E1 1318 aa16.62■□□□□ 0.25
THUMPD3-206ENST00000452837 PLEKHH1Q9ULM0 1364 aa16.62■□□□□ 0.25
THUMPD3-206ENST00000452837 RSPH4AQ5TD94 716 aa16.62■□□□□ 0.25
THUMPD3-206ENST00000452837 ARHGAP5Q13017 1502 aa16.61■□□□□ 0.25
THUMPD3-206ENST00000452837 MYO5CQ9NQX4 1742 aa16.6■□□□□ 0.25
THUMPD3-206ENST00000452837 ZMYM4Q5VZL5 1548 aa16.59■□□□□ 0.25
THUMPD3-206ENST00000452837 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.59■□□□□ 0.25
THUMPD3-206ENST00000452837 LAMC1P11047 1609 aa16.58■□□□□ 0.25
THUMPD3-206ENST00000452837 NEFMP07197 916 aa16.58■□□□□ 0.25
THUMPD3-206ENST00000452837 PPP2R1AP30153 589 aa16.58■□□□□ 0.25
THUMPD3-206ENST00000452837 WDR7Q9Y4E6 1490 aa16.58■□□□□ 0.24
THUMPD3-206ENST00000452837 DUSP27Q5VZP5 1158 aa16.57■□□□□ 0.24
THUMPD3-206ENST00000452837 IQGAP3Q86VI3 1631 aa16.57■□□□□ 0.24
THUMPD3-206ENST00000452837 INSRP06213 1382 aa16.57■□□□□ 0.24
THUMPD3-206ENST00000452837 KDM2BQ8NHM5 1336 aa16.56■□□□□ 0.24
THUMPD3-206ENST00000452837 MAST1Q9Y2H9 1570 aa16.56■□□□□ 0.24
THUMPD3-206ENST00000452837 AMER1Q5JTC6 1135 aaPredicted RBP16.56■□□□□ 0.24
THUMPD3-206ENST00000452837 SLC4A3P48751 1232 aa16.56■□□□□ 0.24
THUMPD3-206ENST00000452837 PRKCSHP14314 528 aaPredicted RBP16.55■□□□□ 0.24
THUMPD3-206ENST00000452837 KNSTRNQ9Y448 316 aa16.54■□□□□ 0.24
THUMPD3-206ENST00000452837 ZNF521Q96K83 1311 aa16.53■□□□□ 0.24
THUMPD3-206ENST00000452837 ATP10AO60312 1499 aa16.53■□□□□ 0.24
THUMPD3-206ENST00000452837 IL27Q8NEV9 243 aa16.53■□□□□ 0.24
THUMPD3-206ENST00000452837 EIF2AK4Q9P2K8 1649 aaKnown RBP16.53■□□□□ 0.24
THUMPD3-206ENST00000452837 CCDC146Q8IYE0 955 aa16.52■□□□□ 0.24
THUMPD3-206ENST00000452837 SPINK5Q9NQ38 1064 aaPredicted RBP16.52■□□□□ 0.24
THUMPD3-206ENST00000452837 WDR43Q15061 677 aaKnown RBP eCLIP16.52■□□□□ 0.23
THUMPD3-206ENST00000452837 RNF17Q9BXT8 1623 aaKnown RBP16.51■□□□□ 0.23
THUMPD3-206ENST00000452837 PLXNC1O60486 1568 aa16.51■□□□□ 0.23
THUMPD3-206ENST00000452837 ERCC6L2Q5T890 1561 aa16.5■□□□□ 0.23
THUMPD3-206ENST00000452837 DUOX2Q9NRD8 1548 aa16.5■□□□□ 0.23
THUMPD3-206ENST00000452837 GOLGA2Q08379 1002 aa16.48■□□□□ 0.23
THUMPD3-206ENST00000452837 TRAPPC8Q9Y2L5 1435 aa16.48■□□□□ 0.23
THUMPD3-206ENST00000452837 C8orf34Q49A92 452 aa16.48■□□□□ 0.23
THUMPD3-206ENST00000452837 MADDQ8WXG6 1647 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms