RNA–Protein interactions for RNA: ENST00000452621.6

RCOR3-204, Transcript of REST corepressor 3, humanhuman

TSL 2 BASIC

Gene RCOR3, Length 1,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCOR3-204ENST00000452621 ARID4BQ4LE39 1312 aaPredicted RBP23.33■■□□□ 1.32
RCOR3-204ENST00000452621 ZNF518AQ6AHZ1 1483 aa23.32■■□□□ 1.32
RCOR3-204ENST00000452621 FOXD1Q16676 465 aa23.32■■□□□ 1.32
RCOR3-204ENST00000452621 ABCC1P33527 1531 aa23.32■■□□□ 1.32
RCOR3-204ENST00000452621 TRAPPC8Q9Y2L5 1435 aa23.32■■□□□ 1.32
RCOR3-204ENST00000452621 HIRIP3Q9BW71 556 aaPredicted RBP23.31■■□□□ 1.32
RCOR3-204ENST00000452621 SIGLEC1Q9BZZ2 1709 aa23.3■■□□□ 1.32
RCOR3-204ENST00000452621 KIF15Q9NS87 1388 aa23.3■■□□□ 1.32
RCOR3-204ENST00000452621 KDM5CP41229 1560 aa23.3■■□□□ 1.32
RCOR3-204ENST00000452621 HSPA5P11021 654 aaKnown RBP23.29■■□□□ 1.32
RCOR3-204ENST00000452621 HNRNPMP52272 730 aaKnown RBP eCLIP23.26■■□□□ 1.31
RCOR3-204ENST00000452621 PKD2Q13563 968 aa23.25■■□□□ 1.31
RCOR3-204ENST00000452621 NUP155O75694 1391 aa23.25■■□□□ 1.31
RCOR3-204ENST00000452621 ADAMTSL3P82987 1691 aa23.25■■□□□ 1.31
RCOR3-204ENST00000452621 BCORL1Q5H9F3 1711 aa23.24■■□□□ 1.31
RCOR3-204ENST00000452621 SYCP2Q9BX26 1530 aa23.24■■□□□ 1.31
RCOR3-204ENST00000452621 PLXNC1O60486 1568 aa23.23■■□□□ 1.31
RCOR3-204ENST00000452621 ATP10AO60312 1499 aa23.23■■□□□ 1.31
RCOR3-204ENST00000452621 MYT1LQ9UL68 1186 aa23.22■■□□□ 1.31
RCOR3-204ENST00000452621 HECW2Q9P2P5 1572 aa23.22■■□□□ 1.31
RCOR3-204ENST00000452621 POLR1AO95602 1720 aaPredicted RBP23.21■■□□□ 1.31
RCOR3-204ENST00000452621 PELP1Q8IZL8 1130 aaKnown RBP23.21■■□□□ 1.31
RCOR3-204ENST00000452621 MLH3Q9UHC1 1453 aa23.21■■□□□ 1.31
RCOR3-204ENST00000452621 MADDQ8WXG6 1647 aa23.2■■□□□ 1.3
RCOR3-204ENST00000452621 MLECQ14165 292 aa23.19■■□□□ 1.3
RCOR3-204ENST00000452621 PTPRMP28827 1452 aa23.18■■□□□ 1.3
RCOR3-204ENST00000452621 DIP2CQ9Y2E4 1556 aa23.18■■□□□ 1.3
RCOR3-204ENST00000452621 UNC13BO14795 1591 aa23.18■■□□□ 1.3
RCOR3-204ENST00000452621 WASHC2AQ641Q2 1341 aa23.17■■□□□ 1.3
RCOR3-204ENST00000452621 ABCA6Q8N139 1617 aa23.17■■□□□ 1.3
RCOR3-204ENST00000452621 NBPF8Q3BBV2 869 aa23.17■■□□□ 1.3
RCOR3-204ENST00000452621 UHRF1BP1Q6BDS2 1440 aa23.15■■□□□ 1.3
RCOR3-204ENST00000452621 SPATA31E1Q6ZUB1 1445 aa23.15■■□□□ 1.3
RCOR3-204ENST00000452621 CNTLNQ9NXG0 1405 aa23.15■■□□□ 1.3
RCOR3-204ENST00000452621 KIDINS220Q9ULH0 1771 aa23.14■■□□□ 1.3
RCOR3-204ENST00000452621 FAM135AQ9P2D6 1515 aa23.14■■□□□ 1.3
RCOR3-204ENST00000452621 DUOX2Q9NRD8 1548 aa23.13■■□□□ 1.29
RCOR3-204ENST00000452621 CCDC7Q96M83 1385 aa23.13■■□□□ 1.29
RCOR3-204ENST00000452621 SPAG9O60271 1321 aaKnown RBP23.12■■□□□ 1.29
RCOR3-204ENST00000452621 ERBINQ96RT1 1412 aa23.1■■□□□ 1.29
RCOR3-204ENST00000452621 RIMS1Q86UR5 1692 aaKnown RBP23.1■■□□□ 1.29
RCOR3-204ENST00000452621 RALGAPBQ86X10 1494 aa23.08■■□□□ 1.29
RCOR3-204ENST00000452621 REREQ9P2R6 1566 aa23.08■■□□□ 1.29
RCOR3-204ENST00000452621 IQGAP3Q86VI3 1631 aa23.08■■□□□ 1.28
RCOR3-204ENST00000452621 PLPPR3Q6T4P5 718 aa23.08■■□□□ 1.28
RCOR3-204ENST00000452621 ATP7AQ04656 1500 aa23.06■■□□□ 1.28
RCOR3-204ENST00000452621 INO80Q9ULG1 1556 aaPredicted RBP23.05■■□□□ 1.28
RCOR3-204ENST00000452621 RTEL1-TNFRSF6BF6WH68 1400 aa23.02■■□□□ 1.28
RCOR3-204ENST00000452621 AGLP35573 1532 aa23.02■■□□□ 1.28
RCOR3-204ENST00000452621 FER1L4A9Z1Z3 1794 aa23.02■■□□□ 1.28
RCOR3-204ENST00000452621 USP47Q96K76 1375 aa23.01■■□□□ 1.27
RCOR3-204ENST00000452621 CCDC144AA2RUR9 1427 aa23■■□□□ 1.27
RCOR3-204ENST00000452621 CEBPAP49715 358 aaPredicted RBP22.99■■□□□ 1.27
RCOR3-204ENST00000452621 KIF7Q2M1P5 1343 aa22.98■■□□□ 1.27
RCOR3-204ENST00000452621 A2MP01023 1474 aa22.97■■□□□ 1.27
RCOR3-204ENST00000452621 C11orf95C9JLR9 678 aaPredicted RBP22.96■■□□□ 1.27
RCOR3-204ENST00000452621 ROCK2O75116 1388 aaKnown RBP22.95■■□□□ 1.26
RCOR3-204ENST00000452621 LMTK3Q96Q04 1460 aa22.92■■□□□ 1.26
RCOR3-204ENST00000452621 ZNF326Q5BKZ1 582 aaKnown RBP22.92■■□□□ 1.26
RCOR3-204ENST00000452621 SUPT16HQ9Y5B9 1047 aaKnown RBP22.92■■□□□ 1.26
RCOR3-204ENST00000452621 CARD11Q9BXL7 1154 aa22.9■■□□□ 1.26
RCOR3-204ENST00000452621 PRKRIP1Q9H875 184 aaPredicted RBP22.9■■□□□ 1.26
RCOR3-204ENST00000452621 LAMC1P11047 1609 aa22.89■■□□□ 1.26
RCOR3-204ENST00000452621 DCAF11Q8TEB1 546 aa22.89■■□□□ 1.25
RCOR3-204ENST00000452621 EIF2AK4Q9P2K8 1649 aaKnown RBP22.89■■□□□ 1.25
RCOR3-204ENST00000452621 PLA2R1Q13018 1463 aa22.88■■□□□ 1.25
RCOR3-204ENST00000452621 DHX29Q7Z478 1369 aaKnown RBP22.87■■□□□ 1.25
RCOR3-204ENST00000452621 TRPM1Q7Z4N2 1603 aa22.87■■□□□ 1.25
RCOR3-204ENST00000452621 GGT6Q6P531 493 aa22.87■■□□□ 1.25
RCOR3-204ENST00000452621 HSPA2P54652 639 aa22.87■■□□□ 1.25
RCOR3-204ENST00000452621 ESF1Q9H501 851 aaKnown RBP22.87■■□□□ 1.25
RCOR3-204ENST00000452621 PRAG1Q86YV5 1406 aa22.87■■□□□ 1.25
RCOR3-204ENST00000452621 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.86■■□□□ 1.252e-6■□□□□ 11.2
RCOR3-204ENST00000452621 DEPDC5O75140 1603 aa22.85■■□□□ 1.25
RCOR3-204ENST00000452621 C3P01024 1663 aa22.83■■□□□ 1.25
RCOR3-204ENST00000452621 KDM2AQ9Y2K7 1162 aa22.82■■□□□ 1.24
RCOR3-204ENST00000452621 KIF3BO15066 747 aa22.82■■□□□ 1.24
RCOR3-204ENST00000452621 GPRASP1Q5JY77 1395 aa22.82■■□□□ 1.24
RCOR3-204ENST00000452621 ZMYM3Q14202 1370 aa22.8■■□□□ 1.24
RCOR3-204ENST00000452621 NEFLP07196 543 aa22.79■■□□□ 1.24
RCOR3-204ENST00000452621 STAC3Q96MF2 364 aa22.79■■□□□ 1.24
RCOR3-204ENST00000452621 TET3O43151 1660 aa22.78■■□□□ 1.24
RCOR3-204ENST00000452621 KANK1Q14678 1352 aa22.78■■□□□ 1.24
RCOR3-204ENST00000452621 HNRNPUQ00839 825 aaKnown RBP eCLIP22.78■■□□□ 1.24
RCOR3-204ENST00000452621 TRPM2O94759 1503 aa22.77■■□□□ 1.24
RCOR3-204ENST00000452621 E9PCH4 1651 aa22.77■■□□□ 1.24
RCOR3-204ENST00000452621 CLTCQ00610 1675 aaKnown RBP22.77■■□□□ 1.24
RCOR3-204ENST00000452621 KTN1Q86UP2 1357 aaKnown RBP22.76■■□□□ 1.23
RCOR3-204ENST00000452621 VWDEQ8N2E2 1590 aa22.75■■□□□ 1.23
RCOR3-204ENST00000452621 MRS2Q9HD23 443 aa22.75■■□□□ 1.23
RCOR3-204ENST00000452621 PRDM15P57071 1507 aaPredicted RBP22.74■■□□□ 1.23
RCOR3-204ENST00000452621 SPHKAPQ2M3C7 1700 aa22.74■■□□□ 1.23
RCOR3-204ENST00000452621 PREX1Q8TCU6 1659 aa22.74■■□□□ 1.23
RCOR3-204ENST00000452621 PTPRTO14522 1441 aa22.73■■□□□ 1.23
RCOR3-204ENST00000452621 MROH2AA6NES4 1674 aa22.73■■□□□ 1.23
RCOR3-204ENST00000452621 ST20-MTHFSA0A0A6YYL1 179 aa22.73■■□□□ 1.23
RCOR3-204ENST00000452621 PPP6R1Q9UPN7 881 aa22.73■■□□□ 1.23
RCOR3-204ENST00000452621 CEP152O94986 1710 aa22.73■■□□□ 1.23
RCOR3-204ENST00000452621 NEURL4Q96JN8 1562 aa22.72■■□□□ 1.23
RCOR3-204ENST00000452621 SETD1BQ9UPS6 1966 aaKnown RBP22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms