RNA–Protein interactions for RNA: ENST00000451980.3

LINC01548-201, Transcript of long intergenic non-protein coding RNA 1548, humanhuman

TSL 5 BASIC

Gene LINC01548, Length 696 nt, Biotype lincRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548-201ENST00000451980 RAPGEF6Q8TEU7 1601 aa13.06□□□□□ -0.32
LINC01548-201ENST00000451980 PLB1Q6P1J6 1458 aa13.05□□□□□ -0.32
LINC01548-201ENST00000451980 PPARGC1BQ86YN6 1023 aaKnown RBP13.05□□□□□ -0.32
LINC01548-201ENST00000451980 G3V3G9 751 aa13.04□□□□□ -0.32
LINC01548-201ENST00000451980 DPY19L2Q6NUT2 758 aa13.04□□□□□ -0.32
LINC01548-201ENST00000451980 NUP153P49790 1475 aaKnown RBP13.04□□□□□ -0.32
LINC01548-201ENST00000451980 HECW1Q76N89 1606 aa13.03□□□□□ -0.32
LINC01548-201ENST00000451980 KANK4Q5T7N3 995 aaPredicted RBP13.03□□□□□ -0.32
LINC01548-201ENST00000451980 BOLA1Q9Y3E2 137 aa13.03□□□□□ -0.32
LINC01548-201ENST00000451980 MAGI3Q5TCQ9 1506 aa13.02□□□□□ -0.33
LINC01548-201ENST00000451980 HOXB3P14651 431 aaPredicted RBP13.01□□□□□ -0.33
LINC01548-201ENST00000451980 CABP2Q9NPB3 220 aa13.01□□□□□ -0.33
LINC01548-201ENST00000451980 PTPRGP23470 1445 aa13.01□□□□□ -0.33
LINC01548-201ENST00000451980 EPRSP07814 1512 aaKnown RBP13.01□□□□□ -0.33
LINC01548-201ENST00000451980 CDK13Q14004 1512 aaKnown RBP13.01□□□□□ -0.33
LINC01548-201ENST00000451980 LRRC9Q6ZRR7 1453 aa12.98□□□□□ -0.33
LINC01548-201ENST00000451980 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
LINC01548-201ENST00000451980 HOXB1P14653 301 aaPredicted RBP12.98□□□□□ -0.33
LINC01548-201ENST00000451980 ARHGEF11O15085 1522 aa12.97□□□□□ -0.33
LINC01548-201ENST00000451980 SPOCK2Q92563 424 aa12.96□□□□□ -0.33
LINC01548-201ENST00000451980 UACAQ9BZF9 1416 aa12.96□□□□□ -0.34
LINC01548-201ENST00000451980 ABCC2Q92887 1545 aa12.95□□□□□ -0.34
LINC01548-201ENST00000451980 DOK7Q18PE1 504 aa12.95□□□□□ -0.34
LINC01548-201ENST00000451980 ZNF710Q8N1W2 664 aa12.95□□□□□ -0.34
LINC01548-201ENST00000451980 ATP10BO94823 1461 aa12.95□□□□□ -0.34
LINC01548-201ENST00000451980 CCDC18Q5T9S5 1454 aa12.95□□□□□ -0.34
LINC01548-201ENST00000451980 RIMBP3CA6NJZ7 1639 aa12.95□□□□□ -0.34
LINC01548-201ENST00000451980 RIMBP3BA6NNM3 1639 aa12.95□□□□□ -0.34
LINC01548-201ENST00000451980 ADCY10Q96PN6 1610 aa12.95□□□□□ -0.34
LINC01548-201ENST00000451980 RIMBP3Q9UFD9 1639 aa12.95□□□□□ -0.34
LINC01548-201ENST00000451980 UHRF1BP1LA0JNW5 1464 aa12.94□□□□□ -0.34
LINC01548-201ENST00000451980 RTN4Q9NQC3 1192 aaKnown RBP12.94□□□□□ -0.34
LINC01548-201ENST00000451980 ATP1B4Q9UN42 357 aaPredicted RBP12.93□□□□□ -0.34
LINC01548-201ENST00000451980 ARID3CA6NKF2 412 aa12.92□□□□□ -0.34
LINC01548-201ENST00000451980 CIZ1Q9ULV3 898 aaPredicted RBP12.92□□□□□ -0.34
LINC01548-201ENST00000451980 EHBP1L1Q8N3D4 1523 aa12.9□□□□□ -0.34
LINC01548-201ENST00000451980 ERBB3P21860 1342 aa12.89□□□□□ -0.35
LINC01548-201ENST00000451980 KDM5BQ9UGL1 1544 aa12.89□□□□□ -0.35
LINC01548-201ENST00000451980 ZCCHC11Q5TAX3 1644 aaKnown RBP12.89□□□□□ -0.35
LINC01548-201ENST00000451980 AMER1Q5JTC6 1135 aaPredicted RBP12.89□□□□□ -0.35
LINC01548-201ENST00000451980 RIMBP2O15034 1052 aa12.88□□□□□ -0.35
LINC01548-201ENST00000451980 PHLDB1Q86UU1 1377 aa12.88□□□□□ -0.35
LINC01548-201ENST00000451980 IFNLR1Q8IU57 520 aaPredicted RBP12.87□□□□□ -0.35
LINC01548-201ENST00000451980 SUPT6HQ7KZ85 1726 aaKnown RBP12.86□□□□□ -0.35
LINC01548-201ENST00000451980 KIF14Q15058 1648 aa12.86□□□□□ -0.35
LINC01548-201ENST00000451980 NCOA2Q15596 1464 aa12.85□□□□□ -0.35
LINC01548-201ENST00000451980 TRIM26Q12899 539 aaPredicted RBP12.85□□□□□ -0.35
LINC01548-201ENST00000451980 TROQ12816 1431 aaPredicted RBP12.85□□□□□ -0.35
LINC01548-201ENST00000451980 MTUS2Q5JR59 1369 aa12.84□□□□□ -0.35
LINC01548-201ENST00000451980 RRBP1Q9P2E9 1410 aaKnown RBP12.83□□□□□ -0.36
LINC01548-201ENST00000451980 ZSWIM6Q9HCJ5 1215 aa12.82□□□□□ -0.36
LINC01548-201ENST00000451980 ABCC10Q5T3U5 1492 aa12.82□□□□□ -0.36
LINC01548-201ENST00000451980 RNF166Q96A37 237 aaPredicted RBP12.81□□□□□ -0.36
LINC01548-201ENST00000451980 EFCAB3Q8N7B9 438 aa12.8□□□□□ -0.36
LINC01548-201ENST00000451980 PCGF6Q9BYE7 350 aa12.8□□□□□ -0.36
LINC01548-201ENST00000451980 VARS2Q5ST30 1063 aaKnown RBP12.79□□□□□ -0.36
LINC01548-201ENST00000451980 CDC42BPAQ5VT25 1732 aa12.79□□□□□ -0.36
LINC01548-201ENST00000451980 MYOM3Q5VTT5 1437 aa12.78□□□□□ -0.36
LINC01548-201ENST00000451980 TTC37Q6PGP7 1564 aa12.77□□□□□ -0.37
LINC01548-201ENST00000451980 PLEKHD1A6NEE1 506 aa12.76□□□□□ -0.37
LINC01548-201ENST00000451980 CYB5RLQ6IPT4 315 aa12.76□□□□□ -0.37
LINC01548-201ENST00000451980 MICALL2Q8IY33 904 aa12.76□□□□□ -0.37
LINC01548-201ENST00000451980 FGD6Q6ZV73 1430 aa12.76□□□□□ -0.37
LINC01548-201ENST00000451980 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.76□□□□□ -0.37
LINC01548-201ENST00000451980 GPATCH8Q9UKJ3 1502 aaKnown RBP12.76□□□□□ -0.37
LINC01548-201ENST00000451980 SLC24A1O60721 1099 aa12.75□□□□□ -0.37
LINC01548-201ENST00000451980 ZNF687Q8N1G0 1237 aa12.75□□□□□ -0.37
LINC01548-201ENST00000451980 CCNB3Q8WWL7 1395 aa12.75□□□□□ -0.37
LINC01548-201ENST00000451980 MYT1LQ9UL68 1186 aa12.75□□□□□ -0.37
LINC01548-201ENST00000451980 CDK11AQ9UQ88 783 aaPredicted RBP12.75□□□□□ -0.37
LINC01548-201ENST00000451980 CDC42BPBQ9Y5S2 1711 aa12.75□□□□□ -0.37
LINC01548-201ENST00000451980 TCOF1Q13428 1488 aaKnown RBP12.74□□□□□ -0.37
LINC01548-201ENST00000451980 WDR7Q9Y4E6 1490 aa12.74□□□□□ -0.37
LINC01548-201ENST00000451980 ASXL2Q76L83 1435 aa12.74□□□□□ -0.37
LINC01548-201ENST00000451980 PTPN23Q9H3S7 1636 aa12.73□□□□□ -0.37
LINC01548-201ENST00000451980 SOX12O15370 315 aa12.72□□□□□ -0.37
LINC01548-201ENST00000451980 TMEM92Q6UXU6 159 aa12.72□□□□□ -0.37
LINC01548-201ENST00000451980 ITSN2Q9NZM3 1697 aa12.72□□□□□ -0.37
LINC01548-201ENST00000451980 PREX2Q70Z35 1606 aa12.72□□□□□ -0.37
LINC01548-201ENST00000451980 PTGER2P43116 358 aa12.71□□□□□ -0.37
LINC01548-201ENST00000451980 GPR153Q6NV75 609 aa12.71□□□□□ -0.37
LINC01548-201ENST00000451980 MAPKBP1O60336 1514 aa12.71□□□□□ -0.38
LINC01548-201ENST00000451980 MIA2Q96PC5 1412 aa12.71□□□□□ -0.38
LINC01548-201ENST00000451980 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC01548-201ENST00000451980 ABCA9Q8IUA7 1624 aa12.7□□□□□ -0.38
LINC01548-201ENST00000451980 MYO5CQ9NQX4 1742 aa12.69□□□□□ -0.38
LINC01548-201ENST00000451980 PTPRKQ15262 1439 aa12.69□□□□□ -0.38
LINC01548-201ENST00000451980 ZNF644Q9H582 1327 aaPredicted RBP12.68□□□□□ -0.38
LINC01548-201ENST00000451980 KCNH8Q96L42 1107 aa12.67□□□□□ -0.38
LINC01548-201ENST00000451980 SAMD9LQ8IVG5 1584 aa12.67□□□□□ -0.38
LINC01548-201ENST00000451980 CAMSAP2Q08AD1 1489 aa12.65□□□□□ -0.38
LINC01548-201ENST00000451980 DNAJC5Q9H3Z4 198 aa12.65□□□□□ -0.38
LINC01548-201ENST00000451980 PLCH2O75038 1416 aa12.64□□□□□ -0.39
LINC01548-201ENST00000451980 ARAP3Q8WWN8 1544 aa12.63□□□□□ -0.39
LINC01548-201ENST00000451980 DNMT1P26358 1616 aaKnown RBP12.63□□□□□ -0.39
LINC01548-201ENST00000451980 FAM50AQ14320 339 aaKnown RBP12.63□□□□□ -0.39
LINC01548-201ENST00000451980 MS4A4AQ96JQ5 239 aa12.63□□□□□ -0.39
LINC01548-201ENST00000451980 DIP2BQ9P265 1576 aa12.63□□□□□ -0.39
LINC01548-201ENST00000451980 GLI2P10070 1586 aa12.62□□□□□ -0.39
LINC01548-201ENST00000451980 RIOK3O14730 519 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms