RNA–Protein interactions for RNA: ENST00000451943.6

DDB1-203, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,224 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-203ENST00000451943 FOXD1Q16676 465 aa12.2□□□□□ -0.46
DDB1-203ENST00000451943 L3MBTL2Q969R5 705 aa12.2□□□□□ -0.46
DDB1-203ENST00000451943 ARHGEF40Q8TER5 1519 aa12.2□□□□□ -0.46
DDB1-203ENST00000451943 ARHGEF12Q9NZN5 1544 aa12.2□□□□□ -0.46
DDB1-203ENST00000451943 NUP155O75694 1391 aa12.19□□□□□ -0.46
DDB1-203ENST00000451943 AFAP1Q8N556 730 aa12.19□□□□□ -0.46
DDB1-203ENST00000451943 POGZQ7Z3K3 1410 aa12.19□□□□□ -0.46
DDB1-203ENST00000451943 PKD2Q13563 968 aa12.18□□□□□ -0.46
DDB1-203ENST00000451943 RTEL1-TNFRSF6BF6WH68 1400 aa12.18□□□□□ -0.46
DDB1-203ENST00000451943 MADDQ8WXG6 1647 aa12.18□□□□□ -0.46
DDB1-203ENST00000451943 UNC13BO14795 1591 aa12.18□□□□□ -0.46
DDB1-203ENST00000451943 ZFYVE16Q7Z3T8 1539 aa12.17□□□□□ -0.46
DDB1-203ENST00000451943 DUOX2Q9NRD8 1548 aa12.17□□□□□ -0.46
DDB1-203ENST00000451943 ATP10AO60312 1499 aa12.16□□□□□ -0.46
DDB1-203ENST00000451943 MLECQ14165 292 aa12.16□□□□□ -0.46
DDB1-203ENST00000451943 ERBINQ96RT1 1412 aa12.16□□□□□ -0.46
DDB1-203ENST00000451943 SIGLEC1Q9BZZ2 1709 aa12.16□□□□□ -0.46
DDB1-203ENST00000451943 FAM135AQ9P2D6 1515 aa12.15□□□□□ -0.46
DDB1-203ENST00000451943 TRAPPC8Q9Y2L5 1435 aa12.13□□□□□ -0.47
DDB1-203ENST00000451943 RIMS1Q86UR5 1692 aaKnown RBP12.13□□□□□ -0.47
DDB1-203ENST00000451943 UHRF1BP1Q6BDS2 1440 aa12.12□□□□□ -0.47
DDB1-203ENST00000451943 IQGAP3Q86VI3 1631 aa12.12□□□□□ -0.47
DDB1-203ENST00000451943 EIF4G2P78344 907 aaKnown RBP eCLIP12.12□□□□□ -0.47
DDB1-203ENST00000451943 DDX10Q13206 875 aaKnown RBP12.12□□□□□ -0.47
DDB1-203ENST00000451943 NBPF8Q3BBV2 869 aa12.12□□□□□ -0.47
DDB1-203ENST00000451943 ZNF518AQ6AHZ1 1483 aa12.12□□□□□ -0.47
DDB1-203ENST00000451943 SETD1BQ9UPS6 1966 aaKnown RBP12.11□□□□□ -0.47
DDB1-203ENST00000451943 LMTK3Q96Q04 1460 aa12.11□□□□□ -0.47
DDB1-203ENST00000451943 PLPPR3Q6T4P5 718 aa12.11□□□□□ -0.47
DDB1-203ENST00000451943 SPATA31E1Q6ZUB1 1445 aa12.11□□□□□ -0.47
DDB1-203ENST00000451943 KDM5CP41229 1560 aa12.1□□□□□ -0.47
DDB1-203ENST00000451943 HSPA5P11021 654 aaKnown RBP12.1□□□□□ -0.47
DDB1-203ENST00000451943 HSPA2P54652 639 aa12.09□□□□□ -0.47
DDB1-203ENST00000451943 MYT1LQ9UL68 1186 aa12.09□□□□□ -0.47
DDB1-203ENST00000451943 SPAG9O60271 1321 aaKnown RBP12.09□□□□□ -0.47
DDB1-203ENST00000451943 MLH3Q9UHC1 1453 aa12.08□□□□□ -0.47
DDB1-203ENST00000451943 CEBPAP49715 358 aaPredicted RBP12.08□□□□□ -0.48
DDB1-203ENST00000451943 HIRIP3Q9BW71 556 aaPredicted RBP12.08□□□□□ -0.48
DDB1-203ENST00000451943 INO80Q9ULG1 1556 aaPredicted RBP12.08□□□□□ -0.48
DDB1-203ENST00000451943 FER1L4A9Z1Z3 1794 aa12.07□□□□□ -0.48
DDB1-203ENST00000451943 SCAF1Q9H7N4 1312 aaKnown RBP12.07□□□□□ -0.48
DDB1-203ENST00000451943 CCER2I3L3R5 266 aa12.06□□□□□ -0.48
DDB1-203ENST00000451943 PLA2R1Q13018 1463 aa12.06□□□□□ -0.48
DDB1-203ENST00000451943 ATP7AQ04656 1500 aa12.06□□□□□ -0.48
DDB1-203ENST00000451943 RALGAPBQ86X10 1494 aa12.05□□□□□ -0.48
DDB1-203ENST00000451943 WASHC2AQ641Q2 1341 aa12.05□□□□□ -0.48
DDB1-203ENST00000451943 DIP2CQ9Y2E4 1556 aa12.05□□□□□ -0.48
DDB1-203ENST00000451943 DEPDC5O75140 1603 aa12.04□□□□□ -0.48
DDB1-203ENST00000451943 REREQ9P2R6 1566 aa12.04□□□□□ -0.48
DDB1-203ENST00000451943 EIF2AK4Q9P2K8 1649 aaKnown RBP12.04□□□□□ -0.48
DDB1-203ENST00000451943 CCDC144AA2RUR9 1427 aa12.03□□□□□ -0.48
DDB1-203ENST00000451943 ANP32CO43423 234 aa12.03□□□□□ -0.48
DDB1-203ENST00000451943 FBXO41Q8TF61 875 aa12.03□□□□□ -0.48
DDB1-203ENST00000451943 YTHDC1Q96MU7 727 aaKnown RBP12.03□□□□□ -0.48
DDB1-203ENST00000451943 KIDINS220Q9ULH0 1771 aa12.02□□□□□ -0.48
DDB1-203ENST00000451943 AGLP35573 1532 aa12.02□□□□□ -0.48
DDB1-203ENST00000451943 VWDEQ8N2E2 1590 aa12.02□□□□□ -0.49
DDB1-203ENST00000451943 ABCA6Q8N139 1617 aa12.02□□□□□ -0.49
DDB1-203ENST00000451943 DHX29Q7Z478 1369 aaKnown RBP12.02□□□□□ -0.49
DDB1-203ENST00000451943 CCDC7Q96M83 1385 aa12.02□□□□□ -0.49
DDB1-203ENST00000451943 POLR1AO95602 1720 aaPredicted RBP12.01□□□□□ -0.49
DDB1-203ENST00000451943 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12□□□□□ -0.49
DDB1-203ENST00000451943 CNTLNQ9NXG0 1405 aa12□□□□□ -0.49
DDB1-203ENST00000451943 USP47Q96K76 1375 aa11.99□□□□□ -0.49
DDB1-203ENST00000451943 PTPRTO14522 1441 aa11.99□□□□□ -0.49
DDB1-203ENST00000451943 PRDM15P57071 1507 aaPredicted RBP11.98□□□□□ -0.49
DDB1-203ENST00000451943 PRAG1Q86YV5 1406 aa11.98□□□□□ -0.49
DDB1-203ENST00000451943 C11orf95C9JLR9 678 aaPredicted RBP11.98□□□□□ -0.49
DDB1-203ENST00000451943 ESF1Q9H501 851 aaKnown RBP11.98□□□□□ -0.49
DDB1-203ENST00000451943 TET3O43151 1660 aa11.97□□□□□ -0.49
DDB1-203ENST00000451943 TRPM2O94759 1503 aa11.97□□□□□ -0.49
DDB1-203ENST00000451943 KANK1Q14678 1352 aa11.97□□□□□ -0.49
DDB1-203ENST00000451943 GPRASP1Q5JY77 1395 aa11.97□□□□□ -0.49
DDB1-203ENST00000451943 NEURL4Q96JN8 1562 aa11.96□□□□□ -0.49
DDB1-203ENST00000451943 A2MP01023 1474 aa11.96□□□□□ -0.49
DDB1-203ENST00000451943 KIF7Q2M1P5 1343 aa11.96□□□□□ -0.49
DDB1-203ENST00000451943 DCAF11Q8TEB1 546 aa11.96□□□□□ -0.49
DDB1-203ENST00000451943 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
DDB1-203ENST00000451943 E9PCH4 1651 aa11.96□□□□□ -0.5
DDB1-203ENST00000451943 PREX1Q8TCU6 1659 aa11.96□□□□□ -0.5
DDB1-203ENST00000451943 LAMC1P11047 1609 aa11.96□□□□□ -0.5
DDB1-203ENST00000451943 MROH1Q8NDA8 1641 aa11.96□□□□□ -0.5
DDB1-203ENST00000451943 LMTK2Q8IWU2 1503 aa11.96□□□□□ -0.5
DDB1-203ENST00000451943 C3P01024 1663 aa11.95□□□□□ -0.5
DDB1-203ENST00000451943 GTF3C3Q9Y5Q9 886 aa11.95□□□□□ -0.5
DDB1-203ENST00000451943 TRPM1Q7Z4N2 1603 aa11.95□□□□□ -0.5
DDB1-203ENST00000451943 ZMYM3Q14202 1370 aa11.94□□□□□ -0.5
DDB1-203ENST00000451943 CERKQ8TCT0 537 aa11.94□□□□□ -0.5
DDB1-203ENST00000451943 DMRT2Q9Y5R5 561 aa11.94□□□□□ -0.5
DDB1-203ENST00000451943 STRCQ7RTU9 1775 aa11.94□□□□□ -0.5
DDB1-203ENST00000451943 RNF17Q9BXT8 1623 aaKnown RBP11.93□□□□□ -0.5
DDB1-203ENST00000451943 CARD11Q9BXL7 1154 aa11.93□□□□□ -0.5
DDB1-203ENST00000451943 PPP6R1Q9UPN7 881 aa11.93□□□□□ -0.5
DDB1-203ENST00000451943 ROCK2O75116 1388 aaKnown RBP11.92□□□□□ -0.5
DDB1-203ENST00000451943 SPHKAPQ2M3C7 1700 aa11.92□□□□□ -0.5
DDB1-203ENST00000451943 KIF3BO15066 747 aa11.92□□□□□ -0.5
DDB1-203ENST00000451943 ZNF326Q5BKZ1 582 aaKnown RBP11.92□□□□□ -0.5
DDB1-203ENST00000451943 GGT6Q6P531 493 aa11.91□□□□□ -0.5
DDB1-203ENST00000451943 KDM2AQ9Y2K7 1162 aa11.91□□□□□ -0.5
DDB1-203ENST00000451943 EFCAB6Q5THR3 1501 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms