RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 UGGT2Q9NYU1 1516 aa10.49□□□□□ -0.73
KARSP1-201ENST00000451871 PREX1Q8TCU6 1659 aa10.48□□□□□ -0.73
KARSP1-201ENST00000451871 MFRPQ9BY79 579 aa10.48□□□□□ -0.73
KARSP1-201ENST00000451871 KIAA0556O60303 1618 aa10.48□□□□□ -0.73
KARSP1-201ENST00000451871 RAPGEF3O95398 923 aa10.47□□□□□ -0.73
KARSP1-201ENST00000451871 CD44P16070 742 aaKnown RBP10.47□□□□□ -0.73
KARSP1-201ENST00000451871 ZRANB1Q9UGI0 708 aa10.47□□□□□ -0.73
KARSP1-201ENST00000451871 PHLDB1Q86UU1 1377 aa10.46□□□□□ -0.74
KARSP1-201ENST00000451871 PHF12Q96QT6 1004 aa10.45□□□□□ -0.74
KARSP1-201ENST00000451871 LTBP4Q8N2S1 1624 aa10.44□□□□□ -0.74
KARSP1-201ENST00000451871 YEATS2Q9ULM3 1422 aa10.44□□□□□ -0.74
KARSP1-201ENST00000451871 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
KARSP1-201ENST00000451871 FER1L4A9Z1Z3 1794 aa10.43□□□□□ -0.74
KARSP1-201ENST00000451871 EFCAB3Q8N7B9 438 aa10.42□□□□□ -0.74
KARSP1-201ENST00000451871 CABP2Q9NPB3 220 aa10.42□□□□□ -0.74
KARSP1-201ENST00000451871 ABCA8O94911 1581 aa10.42□□□□□ -0.74
KARSP1-201ENST00000451871 FRMPD1Q5SYB0 1578 aa10.39□□□□□ -0.75
KARSP1-201ENST00000451871 RAPGEF2Q9Y4G8 1499 aa10.39□□□□□ -0.75
KARSP1-201ENST00000451871 ABCA9Q8IUA7 1624 aa10.39□□□□□ -0.75
KARSP1-201ENST00000451871 PPP1R37O75864 691 aa10.39□□□□□ -0.75
KARSP1-201ENST00000451871 FBXO22Q8NEZ5 403 aa10.39□□□□□ -0.75
KARSP1-201ENST00000451871 NEO1Q92859 1461 aa10.38□□□□□ -0.75
KARSP1-201ENST00000451871 TTC37Q6PGP7 1564 aa10.37□□□□□ -0.75
KARSP1-201ENST00000451871 PHF8Q9UPP1 1060 aa10.37□□□□□ -0.75
KARSP1-201ENST00000451871 ARID3CA6NKF2 412 aa10.37□□□□□ -0.75
KARSP1-201ENST00000451871 TRPC6Q9Y210 931 aa10.37□□□□□ -0.75
KARSP1-201ENST00000451871 PTPRTO14522 1441 aa10.36□□□□□ -0.75
KARSP1-201ENST00000451871 ARHGEF40Q8TER5 1519 aa10.36□□□□□ -0.75
KARSP1-201ENST00000451871 C19orf67A6NJJ6 358 aa10.36□□□□□ -0.75
KARSP1-201ENST00000451871 GOLGA3Q08378 1498 aa10.36□□□□□ -0.75
KARSP1-201ENST00000451871 POGZQ7Z3K3 1410 aa10.35□□□□□ -0.75
KARSP1-201ENST00000451871 UBAP1LF5GYI3 381 aa10.35□□□□□ -0.75
KARSP1-201ENST00000451871 ATP10BO94823 1461 aa10.35□□□□□ -0.75
KARSP1-201ENST00000451871 SETD1BQ9UPS6 1966 aaKnown RBP10.35□□□□□ -0.75
KARSP1-201ENST00000451871 SOX12O15370 315 aa10.34□□□□□ -0.75
KARSP1-201ENST00000451871 MS4A3Q96HJ5 214 aa10.34□□□□□ -0.75
KARSP1-201ENST00000451871 FANCAO15360 1455 aa10.33□□□□□ -0.76
KARSP1-201ENST00000451871 RICTORQ6R327 1708 aa10.33□□□□□ -0.76
KARSP1-201ENST00000451871 NLRP6P59044 892 aa10.33□□□□□ -0.76
KARSP1-201ENST00000451871 MLECQ14165 292 aa10.33□□□□□ -0.76
KARSP1-201ENST00000451871 CTTNBP2Q8WZ74 1663 aa10.33□□□□□ -0.76
KARSP1-201ENST00000451871 SIGLEC1Q9BZZ2 1709 aa10.33□□□□□ -0.76
KARSP1-201ENST00000451871 AKNAQ7Z591 1439 aa10.32□□□□□ -0.76
KARSP1-201ENST00000451871 TMEM132AQ24JP5 1023 aa10.31□□□□□ -0.76
KARSP1-201ENST00000451871 DENND4BO75064 1496 aaPredicted RBP10.31□□□□□ -0.76
KARSP1-201ENST00000451871 FAM9AQ8IZU1 332 aaPredicted RBP10.31□□□□□ -0.76
KARSP1-201ENST00000451871 TMEM106CQ9BVX2 250 aa10.31□□□□□ -0.76
KARSP1-201ENST00000451871 FHOD3Q2V2M9 1422 aa10.3□□□□□ -0.76
KARSP1-201ENST00000451871 MS4A4AQ96JQ5 239 aa10.3□□□□□ -0.76
KARSP1-201ENST00000451871 HSPA1LP34931 641 aa10.29□□□□□ -0.76
KARSP1-201ENST00000451871 CEBPAP49715 358 aaPredicted RBP10.29□□□□□ -0.76
KARSP1-201ENST00000451871 KCNV2Q8TDN2 545 aa10.28□□□□□ -0.76
KARSP1-201ENST00000451871 ARXQ96QS3 562 aa10.27□□□□□ -0.77
KARSP1-201ENST00000451871 UHRF1BP1Q6BDS2 1440 aa10.27□□□□□ -0.77
KARSP1-201ENST00000451871 SETD1AO15047 1707 aaKnown RBP10.27□□□□□ -0.77
KARSP1-201ENST00000451871 P3H3Q8IVL6 736 aa10.26□□□□□ -0.77
KARSP1-201ENST00000451871 WDR70Q9NW82 654 aa10.26□□□□□ -0.77
KARSP1-201ENST00000451871 EFCAB5A4FU69 1503 aa10.26□□□□□ -0.77
KARSP1-201ENST00000451871 ZMYM4Q5VZL5 1548 aa10.26□□□□□ -0.77
KARSP1-201ENST00000451871 ZFYVE16Q7Z3T8 1539 aa10.26□□□□□ -0.77
KARSP1-201ENST00000451871 ARHGEF12Q9NZN5 1544 aa10.25□□□□□ -0.77
KARSP1-201ENST00000451871 MAGI2Q86UL8 1455 aa10.25□□□□□ -0.77
KARSP1-201ENST00000451871 GOLGA2Q08379 1002 aa10.23□□□□□ -0.77
KARSP1-201ENST00000451871 CFAP74Q9C0B2 1584 aa10.23□□□□□ -0.77
KARSP1-201ENST00000451871 HECW1Q76N89 1606 aa10.22□□□□□ -0.77
KARSP1-201ENST00000451871 TTLL13PA6NNM8 815 aa10.22□□□□□ -0.77
KARSP1-201ENST00000451871 EVX2Q03828 476 aa10.21□□□□□ -0.77
KARSP1-201ENST00000451871 RAPGEF6Q8TEU7 1601 aa10.21□□□□□ -0.77
KARSP1-201ENST00000451871 NCKAP5LQ9HCH0 1330 aa10.21□□□□□ -0.78
KARSP1-201ENST00000451871 ATP10AO60312 1499 aa10.21□□□□□ -0.78
KARSP1-201ENST00000451871 PLEKHD1A6NEE1 506 aa10.21□□□□□ -0.78
KARSP1-201ENST00000451871 GALR2O43603 387 aaPredicted RBP10.21□□□□□ -0.78
KARSP1-201ENST00000451871 TIE1P35590 1138 aa10.21□□□□□ -0.78
KARSP1-201ENST00000451871 ERICH6Q7L0X2 663 aa10.21□□□□□ -0.78
KARSP1-201ENST00000451871 C14orf37Q86TY3 774 aa10.21□□□□□ -0.78
KARSP1-201ENST00000451871 BMP2KQ9NSY1 1161 aaPredicted RBP10.2□□□□□ -0.78
KARSP1-201ENST00000451871 MKRN3Q13064 507 aaKnown RBP10.19□□□□□ -0.78
KARSP1-201ENST00000451871 PIP4K2BP78356 416 aa10.19□□□□□ -0.78
KARSP1-201ENST00000451871 LMOD2Q6P5Q4 547 aa10.19□□□□□ -0.78
KARSP1-201ENST00000451871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.19□□□□□ -0.78
KARSP1-201ENST00000451871 NCOA1Q15788 1441 aa10.18□□□□□ -0.78
KARSP1-201ENST00000451871 C9orf84Q5VXU9 1444 aa10.18□□□□□ -0.78
KARSP1-201ENST00000451871 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.18□□□□□ -0.78
KARSP1-201ENST00000451871 ZNF335Q9H4Z2 1342 aaPredicted RBP10.17□□□□□ -0.78
KARSP1-201ENST00000451871 SCAPERQ9BY12 1400 aa10.17□□□□□ -0.78
KARSP1-201ENST00000451871 NUP153P49790 1475 aaKnown RBP10.17□□□□□ -0.78
KARSP1-201ENST00000451871 C3P01024 1663 aa10.16□□□□□ -0.78
KARSP1-201ENST00000451871 HAX1O00165 279 aa10.16□□□□□ -0.78
KARSP1-201ENST00000451871 DAXXQ9UER7 740 aaPredicted RBP10.16□□□□□ -0.78
KARSP1-201ENST00000451871 RGS17Q9UGC6 210 aaPredicted RBP10.16□□□□□ -0.78
KARSP1-201ENST00000451871 PRXQ9BXM0 1461 aa10.15□□□□□ -0.78
KARSP1-201ENST00000451871 TRIM35Q9UPQ4 493 aa10.15□□□□□ -0.78
KARSP1-201ENST00000451871 SUPT6HQ7KZ85 1726 aaKnown RBP10.15□□□□□ -0.79
KARSP1-201ENST00000451871 E2F4Q16254 413 aa10.14□□□□□ -0.79
KARSP1-201ENST00000451871 LARP6Q9BRS8 491 aaKnown RBP10.14□□□□□ -0.79
KARSP1-201ENST00000451871 TRAPPC8Q9Y2L5 1435 aa10.14□□□□□ -0.79
KARSP1-201ENST00000451871 SAMD9Q5K651 1589 aa10.14□□□□□ -0.79
KARSP1-201ENST00000451871 CRISPLD2Q9H0B8 497 aa10.14□□□□□ -0.79
KARSP1-201ENST00000451871 CAMSAP1Q5T5Y3 1602 aa10.13□□□□□ -0.79
KARSP1-201ENST00000451871 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms