RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 P3H3Q8IVL6 736 aa11.14□□□□□ -0.63
GTF3C3-207ENST00000451088 HRO43593 1189 aa11.13□□□□□ -0.63
GTF3C3-207ENST00000451088 NBR1Q14596 966 aa11.12□□□□□ -0.63
GTF3C3-207ENST00000451088 ZBED2Q9BTP6 218 aa11.12□□□□□ -0.63
GTF3C3-207ENST00000451088 MYT1LQ9UL68 1186 aa11.12□□□□□ -0.63
GTF3C3-207ENST00000451088 VPS9D1Q9Y2B5 631 aa11.12□□□□□ -0.63
GTF3C3-207ENST00000451088 KDM2AQ9Y2K7 1162 aa11.12□□□□□ -0.63
GTF3C3-207ENST00000451088 PPP1R3GB7ZBB8 358 aa11.11□□□□□ -0.63
GTF3C3-207ENST00000451088 EN1Q05925 392 aaPredicted RBP11.11□□□□□ -0.63
GTF3C3-207ENST00000451088 C6orf132Q5T0Z8 1188 aa11.11□□□□□ -0.63
GTF3C3-207ENST00000451088 COL9A1P20849 921 aa11.09□□□□□ -0.63
GTF3C3-207ENST00000451088 RNF166Q96A37 237 aaPredicted RBP11.09□□□□□ -0.63
GTF3C3-207ENST00000451088 GRXCR2A6NFK2 248 aa11.08□□□□□ -0.64
GTF3C3-207ENST00000451088 RBM33Q96EV2 1170 aaKnown RBP11.08□□□□□ -0.64
GTF3C3-207ENST00000451088 OSBPP22059 807 aa11.07□□□□□ -0.64
GTF3C3-207ENST00000451088 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
GTF3C3-207ENST00000451088 VSIG10Q8N0Z9 540 aa11.07□□□□□ -0.64
GTF3C3-207ENST00000451088 BHMG1C9JSJ3 638 aaPredicted RBP11.06□□□□□ -0.64
GTF3C3-207ENST00000451088 MAP3K7O43318 606 aa11.05□□□□□ -0.64
GTF3C3-207ENST00000451088 TSR1Q2NL82 804 aaKnown RBP11.05□□□□□ -0.64
GTF3C3-207ENST00000451088 MLLT3P42568 568 aaPredicted RBP11.02□□□□□ -0.65
GTF3C3-207ENST00000451088 PROX2Q3B8N5 592 aa11.02□□□□□ -0.65
GTF3C3-207ENST00000451088 ONECUT3O60422 494 aaPredicted RBP11.01□□□□□ -0.65
GTF3C3-207ENST00000451088 RABGEF1Q9UJ41 708 aa11□□□□□ -0.65
GTF3C3-207ENST00000451088 SEMA3EO15041 775 aa10.98□□□□□ -0.65
GTF3C3-207ENST00000451088 CERKQ8TCT0 537 aa10.98□□□□□ -0.65
GTF3C3-207ENST00000451088 STAC3Q96MF2 364 aa10.98□□□□□ -0.65
GTF3C3-207ENST00000451088 TRIM6-TRIM34B2RNG4 842 aa10.97□□□□□ -0.65
GTF3C3-207ENST00000451088 NBPF3Q9H094 633 aa10.97□□□□□ -0.65
GTF3C3-207ENST00000451088 CDHR5Q9HBB8 845 aa10.96□□□□□ -0.65
GTF3C3-207ENST00000451088 KIAA1468Q9P260 1216 aa10.95□□□□□ -0.66
GTF3C3-207ENST00000451088 MRPL50Q8N5N7 158 aaKnown RBP10.94□□□□□ -0.66
GTF3C3-207ENST00000451088 TESPA1A2RU30 521 aaPredicted RBP10.93□□□□□ -0.66
GTF3C3-207ENST00000451088 NPDC1Q9NQX5 325 aaPredicted RBP10.93□□□□□ -0.66
GTF3C3-207ENST00000451088 TSKSQ9UJT2 592 aa10.93□□□□□ -0.66
GTF3C3-207ENST00000451088 PRSS12P56730 875 aa10.92□□□□□ -0.66
GTF3C3-207ENST00000451088 LAPTM4BQ86VI4 370 aa10.92□□□□□ -0.66
GTF3C3-207ENST00000451088 CDCA7LQ96GN5 454 aa10.92□□□□□ -0.66
GTF3C3-207ENST00000451088 KCTD12Q96CX2 325 aaKnown RBP10.91□□□□□ -0.66
GTF3C3-207ENST00000451088 RBM27Q9P2N5 1060 aaKnown RBP10.91□□□□□ -0.66
GTF3C3-207ENST00000451088 PACS2Q86VP3 889 aa10.89□□□□□ -0.67
GTF3C3-207ENST00000451088 HCSTQ9UBK5 93 aa10.89□□□□□ -0.67
GTF3C3-207ENST00000451088 FAM198AQ9UFP1 575 aa10.89□□□□□ -0.67
GTF3C3-207ENST00000451088 TTC13Q8NBP0 860 aa10.88□□□□□ -0.67
GTF3C3-207ENST00000451088 GOLGA8CPA6NN73 597 aa10.87□□□□□ -0.67
GTF3C3-207ENST00000451088 PTGDRQ13258 359 aa10.86□□□□□ -0.67
GTF3C3-207ENST00000451088 THSD4Q6ZMP0 1018 aa10.86□□□□□ -0.67
GTF3C3-207ENST00000451088 WNT2BQ93097 391 aa10.86□□□□□ -0.67
GTF3C3-207ENST00000451088 SEPT9Q9UHD8 586 aaPredicted RBP10.86□□□□□ -0.67
GTF3C3-207ENST00000451088 FAM98CQ17RN3 349 aaKnown RBP10.85□□□□□ -0.67
GTF3C3-207ENST00000451088 SMYD5Q6GMV2 418 aa10.85□□□□□ -0.67
GTF3C3-207ENST00000451088 C3orf80F5H4A9 247 aa10.84□□□□□ -0.67
GTF3C3-207ENST00000451088 ZFRQ96KR1 1074 aaKnown RBP10.84□□□□□ -0.67
GTF3C3-207ENST00000451088 PADI6Q6TGC4 694 aa10.82□□□□□ -0.68
GTF3C3-207ENST00000451088 ANKK1Q8NFD2 765 aa10.82□□□□□ -0.68
GTF3C3-207ENST00000451088 TATDN2Q93075 761 aa10.82□□□□□ -0.68
GTF3C3-207ENST00000451088 NUTM2FA1L443 756 aa10.81□□□□□ -0.68
GTF3C3-207ENST00000451088 NBPF26B4DH59 902 aa10.81□□□□□ -0.68
GTF3C3-207ENST00000451088 RBM26Q5T8P6 1007 aaKnown RBP10.81□□□□□ -0.68
GTF3C3-207ENST00000451088 SOWAHBA6NEL2 793 aa10.8□□□□□ -0.68
GTF3C3-207ENST00000451088 PTPN5P54829 565 aa10.79□□□□□ -0.68
GTF3C3-207ENST00000451088 NUDT18Q6ZVK8 323 aa10.79□□□□□ -0.68
GTF3C3-207ENST00000451088 PNMA3Q9UL41 463 aa10.79□□□□□ -0.68
GTF3C3-207ENST00000451088 SMAPO00193 183 aa10.78□□□□□ -0.68
GTF3C3-207ENST00000451088 FCHSD2O94868 740 aa10.78□□□□□ -0.68
GTF3C3-207ENST00000451088 BCAMP50895 628 aa10.76□□□□□ -0.69
GTF3C3-207ENST00000451088 GPR37O15354 613 aa10.75□□□□□ -0.69
GTF3C3-207ENST00000451088 HIC1Q14526 733 aa10.74□□□□□ -0.69
GTF3C3-207ENST00000451088 EYA1Q99502 592 aa10.74□□□□□ -0.69
GTF3C3-207ENST00000451088 LRCH3Q96II8 777 aa10.73□□□□□ -0.69
GTF3C3-207ENST00000451088 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.73□□□□□ -0.69
GTF3C3-207ENST00000451088 SAMD7Q7Z3H4 446 aa10.72□□□□□ -0.69
GTF3C3-207ENST00000451088 ADGRG1Q9Y653 693 aa10.71□□□□□ -0.69
GTF3C3-207ENST00000451088 TSR3Q9UJK0 312 aaKnown RBP10.7□□□□□ -0.7
GTF3C3-207ENST00000451088 GNPATO15228 680 aa10.69□□□□□ -0.7
GTF3C3-207ENST00000451088 NYAP1Q6ZVC0 841 aa10.69□□□□□ -0.7
GTF3C3-207ENST00000451088 WBP1LQ9NX94 342 aa10.69□□□□□ -0.7
GTF3C3-207ENST00000451088 TULP1O00294 542 aaPredicted RBP10.68□□□□□ -0.7
GTF3C3-207ENST00000451088 GPIHBP1Q8IV16 184 aa10.68□□□□□ -0.7
GTF3C3-207ENST00000451088 PLA2G2EQ9NZK7 142 aa10.68□□□□□ -0.7
GTF3C3-207ENST00000451088 FECHP22830 423 aa10.67□□□□□ -0.7
GTF3C3-207ENST00000451088 RBM46Q8TBY0 533 aaKnown RBP10.67□□□□□ -0.7
GTF3C3-207ENST00000451088 HPS5Q9UPZ3 1129 aa10.67□□□□□ -0.7
GTF3C3-207ENST00000451088 FAM161AQ3B820 660 aa10.66□□□□□ -0.7
GTF3C3-207ENST00000451088 HDGFP51858 240 aaKnown RBP10.65□□□□□ -0.7
GTF3C3-207ENST00000451088 DNAJB2P25686 324 aa10.64□□□□□ -0.71
GTF3C3-207ENST00000451088 PPP4CP60510 307 aa10.64□□□□□ -0.71
GTF3C3-207ENST00000451088 SWT1Q5T5J6 900 aaKnown RBP10.64□□□□□ -0.71
GTF3C3-207ENST00000451088 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.64□□□□□ -0.71
GTF3C3-207ENST00000451088 OATP04181 439 aa10.63□□□□□ -0.71
GTF3C3-207ENST00000451088 PXYLP1Q8TE99 480 aa10.63□□□□□ -0.71
GTF3C3-207ENST00000451088 TMEM134Q9H6X4 195 aa10.63□□□□□ -0.71
GTF3C3-207ENST00000451088 IFFO2Q5TF58 517 aa10.62□□□□□ -0.71
GTF3C3-207ENST00000451088 RCCD1A6NED2 376 aa10.61□□□□□ -0.71
GTF3C3-207ENST00000451088 METTL3Q86U44 580 aaKnown RBP10.61□□□□□ -0.71
GTF3C3-207ENST00000451088 SLF2Q8IX21 1173 aa10.61□□□□□ -0.71
GTF3C3-207ENST00000451088 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.6□□□□□ -0.71
GTF3C3-207ENST00000451088 ITGBL1O95965 494 aaPredicted RBP10.6□□□□□ -0.71
GTF3C3-207ENST00000451088 NECTIN2Q92692 538 aa10.58□□□□□ -0.72
GTF3C3-207ENST00000451088 RNF40O75150 1001 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms