RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 POLR1AO95602 1720 aaPredicted RBP11.23□□□□□ -0.61
LSM5-208ENST00000450169 ARXQ96QS3 562 aa11.23□□□□□ -0.61
LSM5-208ENST00000450169 AAMPQ13685 434 aa11.22□□□□□ -0.61
LSM5-208ENST00000450169 TMEM132AQ24JP5 1023 aa11.22□□□□□ -0.61
LSM5-208ENST00000450169 AQRO60306 1485 aaKnown RBP eCLIP11.22□□□□□ -0.618e-7■■■□□ 16.1
LSM5-208ENST00000450169 PNISRQ8TF01 805 aaKnown RBP11.21□□□□□ -0.61
LSM5-208ENST00000450169 CENPJQ9HC77 1338 aaPredicted RBP11.21□□□□□ -0.61
LSM5-208ENST00000450169 DHX29Q7Z478 1369 aaKnown RBP11.21□□□□□ -0.61
LSM5-208ENST00000450169 CALD1Q05682 793 aaKnown RBP11.2□□□□□ -0.62
LSM5-208ENST00000450169 FAM161AQ3B820 660 aa11.2□□□□□ -0.62
LSM5-208ENST00000450169 PDCL3Q9H2J4 239 aa11.2□□□□□ -0.62
LSM5-208ENST00000450169 ZBTB12Q9Y330 459 aaPredicted RBP11.2□□□□□ -0.62
LSM5-208ENST00000450169 NAIPQ13075 1403 aa11.19□□□□□ -0.62
LSM5-208ENST00000450169 FMN1Q68DA7 1419 aa11.19□□□□□ -0.62
LSM5-208ENST00000450169 XRCC6P12956 609 aaKnown RBP eCLIP11.19□□□□□ -0.62
LSM5-208ENST00000450169 FGD1P98174 961 aa11.19□□□□□ -0.62
LSM5-208ENST00000450169 CNGB1Q14028 1251 aaPredicted RBP11.19□□□□□ -0.62
LSM5-208ENST00000450169 C8orf34Q49A92 452 aa11.18□□□□□ -0.62
LSM5-208ENST00000450169 FGD6Q6ZV73 1430 aa11.18□□□□□ -0.62
LSM5-208ENST00000450169 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
LSM5-208ENST00000450169 TMC1Q8TDI8 760 aa11.18□□□□□ -0.62
LSM5-208ENST00000450169 PRDM4Q9UKN5 801 aa11.18□□□□□ -0.62
LSM5-208ENST00000450169 PCF11O94913 1555 aaKnown RBP11.17□□□□□ -0.62
LSM5-208ENST00000450169 TARBP1Q13395 1621 aaKnown RBP11.17□□□□□ -0.62
LSM5-208ENST00000450169 KTN1Q86UP2 1357 aaKnown RBP11.17□□□□□ -0.62
LSM5-208ENST00000450169 TDRD9Q8NDG6 1382 aaKnown RBP11.17□□□□□ -0.62
LSM5-208ENST00000450169 PTPRKQ15262 1439 aa11.17□□□□□ -0.62
LSM5-208ENST00000450169 GOLGA6L3A6NEY3 463 aa11.17□□□□□ -0.62
LSM5-208ENST00000450169 SSUH2Q9Y2M2 353 aa11.17□□□□□ -0.62
LSM5-208ENST00000450169 CUL7Q14999 1698 aa11.17□□□□□ -0.62
LSM5-208ENST00000450169 SPATA31E1Q6ZUB1 1445 aa11.17□□□□□ -0.62
LSM5-208ENST00000450169 TPM2P07951 284 aa11.16□□□□□ -0.62
LSM5-208ENST00000450169 LRPPRCP42704 1394 aaKnown RBP11.16□□□□□ -0.62
LSM5-208ENST00000450169 L3MBTL2Q969R5 705 aa11.16□□□□□ -0.62
LSM5-208ENST00000450169 FSD2A1L4K1 749 aa11.15□□□□□ -0.62
LSM5-208ENST00000450169 KDM2BQ8NHM5 1336 aa11.15□□□□□ -0.62
LSM5-208ENST00000450169 CRBNQ96SW2 442 aa11.15□□□□□ -0.62
LSM5-208ENST00000450169 PANK2Q9BZ23 570 aa11.15□□□□□ -0.62
LSM5-208ENST00000450169 MRC2Q9UBG0 1479 aa11.14□□□□□ -0.63
LSM5-208ENST00000450169 HECW1Q76N89 1606 aa11.14□□□□□ -0.63
LSM5-208ENST00000450169 GAPVD1Q14C86 1478 aa11.14□□□□□ -0.63
LSM5-208ENST00000450169 PDE3BQ13370 1112 aa11.14□□□□□ -0.63
LSM5-208ENST00000450169 C14orf37Q86TY3 774 aa11.14□□□□□ -0.63
LSM5-208ENST00000450169 PLIN1O60240 522 aa11.13□□□□□ -0.63
LSM5-208ENST00000450169 CENPQQ7L2Z9 268 aaPredicted RBP11.13□□□□□ -0.63
LSM5-208ENST00000450169 RNF39Q9H2S5 420 aa11.13□□□□□ -0.63
LSM5-208ENST00000450169 DENND4BO75064 1496 aaPredicted RBP11.13□□□□□ -0.63
LSM5-208ENST00000450169 ARID4BQ4LE39 1312 aaPredicted RBP11.13□□□□□ -0.63
LSM5-208ENST00000450169 ESPNB1AK53 854 aa11.12□□□□□ -0.63
LSM5-208ENST00000450169 RGS3P49796 1198 aa11.12□□□□□ -0.63
LSM5-208ENST00000450169 CTTNBP2Q8WZ74 1663 aa11.12□□□□□ -0.63
LSM5-208ENST00000450169 MYOM3Q5VTT5 1437 aa11.12□□□□□ -0.63
LSM5-208ENST00000450169 ATP1B4Q9UN42 357 aaPredicted RBP11.11□□□□□ -0.63
LSM5-208ENST00000450169 NBPF8Q3BBV2 869 aa11.11□□□□□ -0.63
LSM5-208ENST00000450169 MIA2Q96PC5 1412 aa11.11□□□□□ -0.63
LSM5-208ENST00000450169 PDE4CQ08493 712 aa11.1□□□□□ -0.63
LSM5-208ENST00000450169 BECN1Q14457 450 aa11.1□□□□□ -0.63
LSM5-208ENST00000450169 SLKQ9H2G2 1235 aaPredicted RBP11.1□□□□□ -0.63
LSM5-208ENST00000450169 PBRM1Q86U86 1689 aa11.1□□□□□ -0.63
LSM5-208ENST00000450169 WDR62O43379 1518 aa11.1□□□□□ -0.63
LSM5-208ENST00000450169 BRD4O60885 1362 aaPredicted RBP11.1□□□□□ -0.63
LSM5-208ENST00000450169 FYCO1Q9BQS8 1478 aa11.09□□□□□ -0.63
LSM5-208ENST00000450169 ERBB4Q15303 1308 aa11.09□□□□□ -0.63
LSM5-208ENST00000450169 SPDYE2BA6NHP3 402 aa11.09□□□□□ -0.63
LSM5-208ENST00000450169 SPDYE6P0CI01 402 aa11.09□□□□□ -0.63
LSM5-208ENST00000450169 MRE11P49959 708 aa11.09□□□□□ -0.63
LSM5-208ENST00000450169 SPDYE2Q495Y8 402 aa11.09□□□□□ -0.63
LSM5-208ENST00000450169 POLR3GLQ9BT43 218 aa11.08□□□□□ -0.64
LSM5-208ENST00000450169 MYH16Q9H6N6 1097 aa11.07□□□□□ -0.64
LSM5-208ENST00000450169 TEX14Q8IWB6 1497 aa11.07□□□□□ -0.64
LSM5-208ENST00000450169 GZF1Q9H116 711 aaPredicted RBP11.07□□□□□ -0.64
LSM5-208ENST00000450169 ANTXR1Q9H6X2 564 aa11.07□□□□□ -0.64
LSM5-208ENST00000450169 STK25O00506 426 aa11.06□□□□□ -0.64
LSM5-208ENST00000450169 CDCA7LQ96GN5 454 aa11.06□□□□□ -0.64
LSM5-208ENST00000450169 MYBBP1AQ9BQG0 1328 aaKnown RBP11.06□□□□□ -0.64
LSM5-208ENST00000450169 ZNF608Q9ULD9 1512 aaPredicted RBP11.06□□□□□ -0.64
LSM5-208ENST00000450169 P3H3Q8IVL6 736 aa11.06□□□□□ -0.64
LSM5-208ENST00000450169 FHOD3Q2V2M9 1422 aa11.06□□□□□ -0.64
LSM5-208ENST00000450169 USP19O94966 1318 aa11.06□□□□□ -0.64
LSM5-208ENST00000450169 KIF15Q9NS87 1388 aa11.05□□□□□ -0.64
LSM5-208ENST00000450169 KIAA1211Q6ZU35 1233 aa11.05□□□□□ -0.64
LSM5-208ENST00000450169 THOC2Q8NI27 1593 aaKnown RBP11.05□□□□□ -0.64
LSM5-208ENST00000450169 TRIM44Q96DX7 344 aaPredicted RBP11.05□□□□□ -0.64
LSM5-208ENST00000450169 RPRD2Q5VT52 1461 aaKnown RBP11.05□□□□□ -0.64
LSM5-208ENST00000450169 BCORL1Q5H9F3 1711 aa11.05□□□□□ -0.64
LSM5-208ENST00000450169 CASKIN1Q8WXD9 1431 aa11.05□□□□□ -0.64
LSM5-208ENST00000450169 C20orf194Q5TEA3 1177 aa11.05□□□□□ -0.64
LSM5-208ENST00000450169 ERCC6Q03468 1493 aa11.05□□□□□ -0.64
LSM5-208ENST00000450169 VIRMAQ69YN4 1812 aaKnown RBP11.05□□□□□ -0.64
LSM5-208ENST00000450169 GCC2Q8IWJ2 1684 aa11.04□□□□□ -0.64
LSM5-208ENST00000450169 ROCK2O75116 1388 aaKnown RBP11.04□□□□□ -0.64
LSM5-208ENST00000450169 MPHOSPH9Q99550 1183 aa11.04□□□□□ -0.64
LSM5-208ENST00000450169 GRPEL1Q9HAV7 217 aa11.04□□□□□ -0.64
LSM5-208ENST00000450169 HOMEZQ8IX15 550 aa11.04□□□□□ -0.64
LSM5-208ENST00000450169 EFCAB5A4FU69 1503 aa11.03□□□□□ -0.64
LSM5-208ENST00000450169 ADAMTS12P58397 1594 aa11.03□□□□□ -0.64
LSM5-208ENST00000450169 RIOK3O14730 519 aaKnown RBP11.03□□□□□ -0.64
LSM5-208ENST00000450169 MAP7D2Q96T17 732 aa11.03□□□□□ -0.64
LSM5-208ENST00000450169 MCM4P33991 863 aa11.02□□□□□ -0.64
LSM5-208ENST00000450169 RALBP1Q15311 655 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms