RNA–Protein interactions for RNA: ENST00000449901.6

PKM-204, Transcript of pyruvate kinase M1/2, humanhuman

TSL 2 BASIC

Gene PKM, Length 2,526 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-204ENST00000449901 ARHGAP5Q13017 1502 aa31.78■■■□□ 2.68
PKM-204ENST00000449901 ARHGEF5Q12774 1597 aa31.76■■■□□ 2.67
PKM-204ENST00000449901 SHANK2Q9UPX8 1470 aa31.75■■■□□ 2.67
PKM-204ENST00000449901 USP47Q96K76 1375 aa31.75■■■□□ 2.67
PKM-204ENST00000449901 ANO8Q9HCE9 1232 aaPredicted RBP31.74■■■□□ 2.67
PKM-204ENST00000449901 C9orf84Q5VXU9 1444 aa31.73■■■□□ 2.67
PKM-204ENST00000449901 WDR7Q9Y4E6 1490 aa31.71■■■□□ 2.67
PKM-204ENST00000449901 ANKRD30AQ9BXX3 1397 aa31.71■■■□□ 2.67
PKM-204ENST00000449901 NPM2Q86SE8 214 aaKnown RBP31.71■■■□□ 2.67
PKM-204ENST00000449901 TMC1Q8TDI8 760 aa31.7■■■□□ 2.67
PKM-204ENST00000449901 PLCH2O75038 1416 aa31.7■■■□□ 2.66
PKM-204ENST00000449901 SYCP2Q9BX26 1530 aa31.7■■■□□ 2.66
PKM-204ENST00000449901 IL27Q8NEV9 243 aa31.69■■■□□ 2.66
PKM-204ENST00000449901 CCDC141Q6ZP82 1450 aa31.68■■■□□ 2.66
PKM-204ENST00000449901 PZPP20742 1482 aa31.67■■■□□ 2.66
PKM-204ENST00000449901 EXOC6Q8TAG9 804 aa31.67■■■□□ 2.66
PKM-204ENST00000449901 ZNF326Q5BKZ1 582 aaKnown RBP31.67■■■□□ 2.66
PKM-204ENST00000449901 TSPY4P0CV99 314 aa31.66■■■□□ 2.66
PKM-204ENST00000449901 TSPY10P0CW01 314 aa31.66■■■□□ 2.66
PKM-204ENST00000449901 KDM5CP41229 1560 aa31.66■■■□□ 2.66
PKM-204ENST00000449901 RRP1P56182 461 aaKnown RBP31.65■■■□□ 2.66
PKM-204ENST00000449901 LRPPRCP42704 1394 aaKnown RBP31.64■■■□□ 2.66
PKM-204ENST00000449901 ASXL2Q76L83 1435 aa31.63■■■□□ 2.65
PKM-204ENST00000449901 ARID4BQ4LE39 1312 aaPredicted RBP31.63■■■□□ 2.65
PKM-204ENST00000449901 TCERG1O14776 1098 aaKnown RBP31.62■■■□□ 2.65
PKM-204ENST00000449901 PDE4AP27815 886 aa31.62■■■□□ 2.65
PKM-204ENST00000449901 SALL2Q9Y467 1007 aaPredicted RBP31.61■■■□□ 2.65
PKM-204ENST00000449901 LAS1LQ9Y4W2 734 aaKnown RBP31.61■■■□□ 2.65
PKM-204ENST00000449901 ARHGEF12Q9NZN5 1544 aa31.6■■■□□ 2.65
PKM-204ENST00000449901 KIAA1107Q9UPP5 1409 aa31.6■■■□□ 2.65
PKM-204ENST00000449901 RSPH4AQ5TD94 716 aa31.59■■■□□ 2.65
PKM-204ENST00000449901 ANKRD50Q9ULJ7 1429 aa31.59■■■□□ 2.65
PKM-204ENST00000449901 PLEKHH2Q8IVE3 1493 aa31.58■■■□□ 2.65
PKM-204ENST00000449901 EFCAB2Q5VUJ9 269 aa31.57■■■□□ 2.64
PKM-204ENST00000449901 NEFMP07197 916 aa31.56■■■□□ 2.64
PKM-204ENST00000449901 BACH2Q9BYV9 841 aa31.56■■■□□ 2.64
PKM-204ENST00000449901 KIF15Q9NS87 1388 aa31.55■■■□□ 2.64
PKM-204ENST00000449901 ROCK2O75116 1388 aaKnown RBP31.54■■■□□ 2.64
PKM-204ENST00000449901 ABCA9Q8IUA7 1624 aa31.54■■■□□ 2.64
PKM-204ENST00000449901 RCAN3Q9UKA8 241 aa31.53■■■□□ 2.64
PKM-204ENST00000449901 ABCC1P33527 1531 aa31.53■■■□□ 2.64
PKM-204ENST00000449901 ARAP3Q8WWN8 1544 aa31.53■■■□□ 2.64
PKM-204ENST00000449901 MAST1Q9Y2H9 1570 aa31.52■■■□□ 2.64
PKM-204ENST00000449901 RTN4Q9NQC3 1192 aaKnown RBP31.52■■■□□ 2.64
PKM-204ENST00000449901 NPM1P06748 294 aaKnown RBP eCLIP31.52■■■□□ 2.64
PKM-204ENST00000449901 BRD4O60885 1362 aaPredicted RBP31.52■■■□□ 2.64
PKM-204ENST00000449901 USP35Q9P2H5 1018 aa31.5■■■□□ 2.63
PKM-204ENST00000449901 MYBBP1AQ9BQG0 1328 aaKnown RBP31.49■■■□□ 2.63
PKM-204ENST00000449901 MS4A1P11836 297 aa31.47■■■□□ 2.63
PKM-204ENST00000449901 PKD2Q13563 968 aa31.46■■■□□ 2.63
PKM-204ENST00000449901 TRAPPC8Q9Y2L5 1435 aa31.45■■■□□ 2.63
PKM-204ENST00000449901 RALGAPBQ86X10 1494 aa31.44■■■□□ 2.62
PKM-204ENST00000449901 UHRF1BP1Q6BDS2 1440 aa31.43■■■□□ 2.62
PKM-204ENST00000449901 RALBP1Q15311 655 aa31.43■■■□□ 2.62
PKM-204ENST00000449901 CARD11Q9BXL7 1154 aa31.43■■■□□ 2.62
PKM-204ENST00000449901 WASHC2CQ9Y4E1 1318 aa31.43■■■□□ 2.62
PKM-204ENST00000449901 FANCAO15360 1455 aa31.42■■■□□ 2.62
PKM-204ENST00000449901 PLXNC1O60486 1568 aa31.41■■■□□ 2.62
PKM-204ENST00000449901 PPM1GO15355 546 aaPredicted RBP31.4■■■□□ 2.62
PKM-204ENST00000449901 ST20-MTHFSA0A0A6YYL1 179 aa31.39■■■□□ 2.62
PKM-204ENST00000449901 RIMBP3CA6NJZ7 1639 aa31.39■■■□□ 2.62
PKM-204ENST00000449901 RIMBP3BA6NNM3 1639 aa31.39■■■□□ 2.62
PKM-204ENST00000449901 RIMBP3Q9UFD9 1639 aa31.39■■■□□ 2.62
PKM-204ENST00000449901 KTN1Q86UP2 1357 aaKnown RBP31.39■■■□□ 2.61
PKM-204ENST00000449901 NUP155O75694 1391 aa31.38■■■□□ 2.61
PKM-204ENST00000449901 E9PCH4 1651 aa31.37■■■□□ 2.61
PKM-204ENST00000449901 SKAP1Q86WV1 359 aa31.37■■■□□ 2.61
PKM-204ENST00000449901 CYB5RLQ6IPT4 315 aa31.36■■■□□ 2.61
PKM-204ENST00000449901 CDCA7LQ96GN5 454 aa31.36■■■□□ 2.61
PKM-204ENST00000449901 KDM5DQ9BY66 1539 aa31.35■■■□□ 2.61
PKM-204ENST00000449901 AFAP1Q8N556 730 aa31.34■■■□□ 2.61
PKM-204ENST00000449901 PDE3BQ13370 1112 aa31.34■■■□□ 2.61
PKM-204ENST00000449901 PLIN1O60240 522 aa31.32■■■□□ 2.6
PKM-204ENST00000449901 DUOX2Q9NRD8 1548 aa31.29■■■□□ 2.6
PKM-204ENST00000449901 ADGRL1O94910 1474 aa31.29■■■□□ 2.6
PKM-204ENST00000449901 NLRP13Q86W25 1043 aa31.29■■■□□ 2.6
PKM-204ENST00000449901 KDM2AQ9Y2K7 1162 aa31.28■■■□□ 2.6
PKM-204ENST00000449901 SPAG9O60271 1321 aaKnown RBP31.27■■■□□ 2.6
PKM-204ENST00000449901 SCAPERQ9BY12 1400 aa31.26■■■□□ 2.6
PKM-204ENST00000449901 ZFYVE16Q7Z3T8 1539 aa31.26■■■□□ 2.6
PKM-204ENST00000449901 CD109Q6YHK3 1445 aa31.26■■■□□ 2.59
PKM-204ENST00000449901 PARD3Q8TEW0 1356 aa31.26■■■□□ 2.59
PKM-204ENST00000449901 CRBNQ96SW2 442 aa31.25■■■□□ 2.59
PKM-204ENST00000449901 RTEL1-TNFRSF6BF6WH68 1400 aa31.24■■■□□ 2.59
PKM-204ENST00000449901 UNC13BO14795 1591 aa31.24■■■□□ 2.59
PKM-204ENST00000449901 DDRGK1Q96HY6 314 aa31.23■■■□□ 2.59
PKM-204ENST00000449901 FAM135AQ9P2D6 1515 aa31.22■■■□□ 2.59
PKM-204ENST00000449901 ERBINQ96RT1 1412 aa31.21■■■□□ 2.59
PKM-204ENST00000449901 ZBTB4Q9P1Z0 1013 aaPredicted RBP31.21■■■□□ 2.59
PKM-204ENST00000449901 BRPF3Q9ULD4 1205 aa31.21■■■□□ 2.59
PKM-204ENST00000449901 INO80Q9ULG1 1556 aaPredicted RBP31.19■■■□□ 2.58
PKM-204ENST00000449901 GSE1Q14687 1217 aa31.19■■■□□ 2.58
PKM-204ENST00000449901 NFKBIBQ15653 356 aa31.18■■■□□ 2.58
PKM-204ENST00000449901 DCAF11Q8TEB1 546 aa31.18■■■□□ 2.58
PKM-204ENST00000449901 SLC4A3P48751 1232 aa31.17■■■□□ 2.58
PKM-204ENST00000449901 ATP7AQ04656 1500 aa31.17■■■□□ 2.58
PKM-204ENST00000449901 PER1O15534 1290 aaPredicted RBP31.16■■■□□ 2.58
PKM-204ENST00000449901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.16■■■□□ 2.583e-16■□□□□ 9.7
PKM-204ENST00000449901 MAGI2Q86UL8 1455 aa31.13■■■□□ 2.57
PKM-204ENST00000449901 CFAP74Q9C0B2 1584 aa31.12■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms