RNA–Protein interactions for RNA: ENST00000449544.5

HCG18-238, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 4,262 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-238ENST00000449544 AMPHP49418 695 aa11.44□□□□□ -0.58
HCG18-238ENST00000449544 EIF4G2P78344 907 aaKnown RBP eCLIP11.44□□□□□ -0.58
HCG18-238ENST00000449544 FAM135AQ9P2D6 1515 aa11.44□□□□□ -0.58
HCG18-238ENST00000449544 STRN4Q9NRL3 753 aa11.44□□□□□ -0.58
HCG18-238ENST00000449544 TSPOAP1O95153 1857 aa11.44□□□□□ -0.58
HCG18-238ENST00000449544 TERF2IPQ9NYB0 399 aa11.44□□□□□ -0.58
HCG18-238ENST00000449544 PBRM1Q86U86 1689 aa11.43□□□□□ -0.58
HCG18-238ENST00000449544 ZMYM3Q14202 1370 aa11.43□□□□□ -0.58
HCG18-238ENST00000449544 IDI1Q13907 227 aa11.43□□□□□ -0.58
HCG18-238ENST00000449544 CFAP53Q96M91 514 aa11.43□□□□□ -0.58
HCG18-238ENST00000449544 TMF1P82094 1093 aa11.43□□□□□ -0.58
HCG18-238ENST00000449544 SYTL4Q96C24 671 aaPredicted RBP11.43□□□□□ -0.58
HCG18-238ENST00000449544 KIF14Q15058 1648 aa11.43□□□□□ -0.58
HCG18-238ENST00000449544 XPCQ01831 940 aaPredicted RBP11.42□□□□□ -0.58
HCG18-238ENST00000449544 TMEM132EQ6IEE7 984 aa11.42□□□□□ -0.58
HCG18-238ENST00000449544 DHX57Q6P158 1386 aaKnown RBP11.42□□□□□ -0.58
HCG18-238ENST00000449544 PRDM11Q9NQV5 511 aa11.42□□□□□ -0.58
HCG18-238ENST00000449544 UGGT2Q9NYU1 1516 aa11.42□□□□□ -0.58
HCG18-238ENST00000449544 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.42□□□□□ -0.581e-6■■■■□ 21.3
HCG18-238ENST00000449544 SIN3AQ96ST3 1273 aa11.42□□□□□ -0.58
HCG18-238ENST00000449544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.42□□□□□ -0.58
HCG18-238ENST00000449544 AMOTL2Q9Y2J4 779 aa11.41□□□□□ -0.58
HCG18-238ENST00000449544 CNTLNQ9NXG0 1405 aa11.41□□□□□ -0.58
HCG18-238ENST00000449544 KIF21BO75037 1637 aa11.41□□□□□ -0.58
HCG18-238ENST00000449544 BCL11AQ9H165 835 aa11.41□□□□□ -0.58
HCG18-238ENST00000449544 DHX29Q7Z478 1369 aaKnown RBP11.41□□□□□ -0.58
HCG18-238ENST00000449544 PDE3BQ13370 1112 aa11.41□□□□□ -0.58
HCG18-238ENST00000449544 NUTM2GQ5VZR2 741 aa11.41□□□□□ -0.58
HCG18-238ENST00000449544 PMFBP1Q8TBY8 1022 aa11.4□□□□□ -0.58
HCG18-238ENST00000449544 ATP10AO60312 1499 aa11.4□□□□□ -0.58
HCG18-238ENST00000449544 FGD6Q6ZV73 1430 aa11.4□□□□□ -0.58
HCG18-238ENST00000449544 CCDC141Q6ZP82 1450 aa11.4□□□□□ -0.58
HCG18-238ENST00000449544 SETD5Q9C0A6 1442 aa11.4□□□□□ -0.58
HCG18-238ENST00000449544 CERKQ8TCT0 537 aa11.4□□□□□ -0.59
HCG18-238ENST00000449544 ZNF330Q9Y3S2 320 aaPredicted RBP11.39□□□□□ -0.59
HCG18-238ENST00000449544 ABCA5Q8WWZ7 1642 aa11.39□□□□□ -0.59
HCG18-238ENST00000449544 C8orf37Q96NL8 207 aa11.39□□□□□ -0.59
HCG18-238ENST00000449544 PPP1R1BQ9UD71 204 aaPredicted RBP11.39□□□□□ -0.59
HCG18-238ENST00000449544 KIAA0556O60303 1618 aa11.38□□□□□ -0.59
HCG18-238ENST00000449544 NEO1Q92859 1461 aa11.38□□□□□ -0.59
HCG18-238ENST00000449544 FOXO3O43524 673 aa11.37□□□□□ -0.59
HCG18-238ENST00000449544 NUDCQ9Y266 331 aa11.37□□□□□ -0.59
HCG18-238ENST00000449544 A2MP01023 1474 aa11.37□□□□□ -0.59
HCG18-238ENST00000449544 ANP32CO43423 234 aa11.37□□□□□ -0.59
HCG18-238ENST00000449544 NLRP6P59044 892 aa11.37□□□□□ -0.59
HCG18-238ENST00000449544 NUP153P49790 1475 aaKnown RBP11.36□□□□□ -0.59
HCG18-238ENST00000449544 LRRC9Q6ZRR7 1453 aa11.36□□□□□ -0.59
HCG18-238ENST00000449544 EIF3AQ14152 1382 aaKnown RBP11.36□□□□□ -0.59
HCG18-238ENST00000449544 ABTB2Q8N961 1025 aa11.36□□□□□ -0.59
HCG18-238ENST00000449544 NLRP2Q9NX02 1062 aa11.36□□□□□ -0.59
HCG18-238ENST00000449544 U2SURPO15042 1029 aaKnown RBP11.36□□□□□ -0.59
HCG18-238ENST00000449544 WDR43Q15061 677 aaKnown RBP eCLIP11.36□□□□□ -0.59
HCG18-238ENST00000449544 DISP1Q96F81 1524 aa11.36□□□□□ -0.59
HCG18-238ENST00000449544 ZBTB47Q9UFB7 747 aaPredicted RBP11.35□□□□□ -0.59
HCG18-238ENST00000449544 RAPGEF6Q8TEU7 1601 aa11.35□□□□□ -0.59
HCG18-238ENST00000449544 UHRF1BP1LA0JNW5 1464 aa11.35□□□□□ -0.59
HCG18-238ENST00000449544 EHBP1L1Q8N3D4 1523 aa11.35□□□□□ -0.59
HCG18-238ENST00000449544 ERCC6L2Q5T890 1561 aa11.35□□□□□ -0.59
HCG18-238ENST00000449544 ROCK2O75116 1388 aaKnown RBP11.35□□□□□ -0.59
HCG18-238ENST00000449544 MIA2Q96PC5 1412 aa11.35□□□□□ -0.59
HCG18-238ENST00000449544 EVC2Q86UK5 1308 aa11.34□□□□□ -0.59
HCG18-238ENST00000449544 TRAPPC8Q9Y2L5 1435 aa11.34□□□□□ -0.59
HCG18-238ENST00000449544 TMX4Q9H1E5 349 aaPredicted RBP11.33□□□□□ -0.6
HCG18-238ENST00000449544 PELP1Q8IZL8 1130 aaKnown RBP11.33□□□□□ -0.6
HCG18-238ENST00000449544 C19orf44Q9H6X5 657 aa11.33□□□□□ -0.6
HCG18-238ENST00000449544 CANXP27824 592 aaKnown RBP11.33□□□□□ -0.6
HCG18-238ENST00000449544 PRAM1Q96QH2 718 aa11.33□□□□□ -0.6
HCG18-238ENST00000449544 MORC1Q86VD1 984 aa11.32□□□□□ -0.6
HCG18-238ENST00000449544 CFAP70Q5T0N1 1121 aa11.32□□□□□ -0.6
HCG18-238ENST00000449544 TOM1L2Q6ZVM7 507 aa11.32□□□□□ -0.6
HCG18-238ENST00000449544 LRRC59Q96AG4 307 aaKnown RBP11.32□□□□□ -0.6
HCG18-238ENST00000449544 COG3Q96JB2 828 aa11.32□□□□□ -0.6
HCG18-238ENST00000449544 KDM5BQ9UGL1 1544 aa11.31□□□□□ -0.6
HCG18-238ENST00000449544 NLRP13Q86W25 1043 aa11.3□□□□□ -0.6
HCG18-238ENST00000449544 STAC3Q96MF2 364 aa11.3□□□□□ -0.6
HCG18-238ENST00000449544 ZC3H6P61129 1189 aaKnown RBP11.3□□□□□ -0.6
HCG18-238ENST00000449544 MAPK8IP3Q9UPT6 1336 aa11.3□□□□□ -0.6
HCG18-238ENST00000449544 YEATS2Q9ULM3 1422 aa11.3□□□□□ -0.6
HCG18-238ENST00000449544 ZFYVE16Q7Z3T8 1539 aa11.29□□□□□ -0.6
HCG18-238ENST00000449544 RAPGEF4Q8WZA2 1011 aa11.29□□□□□ -0.6
HCG18-238ENST00000449544 RAB3GAP2Q9H2M9 1393 aa11.29□□□□□ -0.6
HCG18-238ENST00000449544 YTHDC1Q96MU7 727 aaKnown RBP11.29□□□□□ -0.6
HCG18-238ENST00000449544 RPGRIP1LQ68CZ1 1315 aa11.29□□□□□ -0.6
HCG18-238ENST00000449544 ZNF335Q9H4Z2 1342 aaPredicted RBP11.28□□□□□ -0.6
HCG18-238ENST00000449544 GTF2E1P29083 439 aaPredicted RBP11.28□□□□□ -0.6
HCG18-238ENST00000449544 RTF1Q92541 710 aaKnown RBP11.28□□□□□ -0.6
HCG18-238ENST00000449544 LRPPRCP42704 1394 aaKnown RBP11.28□□□□□ -0.6
HCG18-238ENST00000449544 KDM4FA0A1W2PPD8 638 aa11.28□□□□□ -0.6
HCG18-238ENST00000449544 SALL2Q9Y467 1007 aaPredicted RBP11.27□□□□□ -0.6
HCG18-238ENST00000449544 L3MBTL2Q969R5 705 aa11.27□□□□□ -0.61
HCG18-238ENST00000449544 PHF8Q9UPP1 1060 aa11.27□□□□□ -0.61
HCG18-238ENST00000449544 CENPJQ9HC77 1338 aaPredicted RBP11.27□□□□□ -0.61
HCG18-238ENST00000449544 KCNA6P17658 529 aa11.26□□□□□ -0.61
HCG18-238ENST00000449544 FBXO41Q8TF61 875 aa11.26□□□□□ -0.61
HCG18-238ENST00000449544 SLAIN2Q9P270 581 aa11.26□□□□□ -0.61
HCG18-238ENST00000449544 GPATCH8Q9UKJ3 1502 aaKnown RBP11.26□□□□□ -0.61
HCG18-238ENST00000449544 NPHP3Q7Z494 1330 aa11.26□□□□□ -0.61
HCG18-238ENST00000449544 CAMSAP2Q08AD1 1489 aa11.26□□□□□ -0.61
HCG18-238ENST00000449544 KIAA1107Q9UPP5 1409 aa11.25□□□□□ -0.61
HCG18-238ENST00000449544 KRT28Q7Z3Y7 464 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms