RNA–Protein interactions for RNA: ENST00000449469.5

SNHG17-207, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,138 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-207ENST00000449469 CDC42BPBQ9Y5S2 1711 aa22.83■■□□□ 1.24
SNHG17-207ENST00000449469 PNISRQ8TF01 805 aaKnown RBP22.82■■□□□ 1.24
SNHG17-207ENST00000449469 LRPPRCP42704 1394 aaKnown RBP22.82■■□□□ 1.24
SNHG17-207ENST00000449469 TMC1Q8TDI8 760 aa22.8■■□□□ 1.24
SNHG17-207ENST00000449469 MYBBP1AQ9BQG0 1328 aaKnown RBP22.8■■□□□ 1.24
SNHG17-207ENST00000449469 TRPM1Q7Z4N2 1603 aa22.8■■□□□ 1.24
SNHG17-207ENST00000449469 PLEKHH2Q8IVE3 1493 aa22.79■■□□□ 1.24
SNHG17-207ENST00000449469 PLXNC1O60486 1568 aa22.79■■□□□ 1.24
SNHG17-207ENST00000449469 CCDC144AA2RUR9 1427 aa22.78■■□□□ 1.24
SNHG17-207ENST00000449469 PRAG1Q86YV5 1406 aa22.78■■□□□ 1.24
SNHG17-207ENST00000449469 GPRASP1Q5JY77 1395 aa22.77■■□□□ 1.24
SNHG17-207ENST00000449469 MSH5O43196 834 aa22.76■■□□□ 1.23
SNHG17-207ENST00000449469 POLR3GLQ9BT43 218 aa22.76■■□□□ 1.23
SNHG17-207ENST00000449469 B4GALNT3Q6L9W6 998 aa22.76■■□□□ 1.23
SNHG17-207ENST00000449469 EIF2AK4Q9P2K8 1649 aaKnown RBP22.76■■□□□ 1.23
SNHG17-207ENST00000449469 HNRNPMP52272 730 aaKnown RBP eCLIP22.75■■□□□ 1.233e-11■■■■□ 26.2
SNHG17-207ENST00000449469 ST20-MTHFSA0A0A6YYL1 179 aa22.75■■□□□ 1.23
SNHG17-207ENST00000449469 DCAF11Q8TEB1 546 aa22.75■■□□□ 1.23
SNHG17-207ENST00000449469 INSRP06213 1382 aa22.74■■□□□ 1.23
SNHG17-207ENST00000449469 IQGAP3Q86VI3 1631 aa22.74■■□□□ 1.23
SNHG17-207ENST00000449469 ZMYM4Q5VZL5 1548 aa22.73■■□□□ 1.23
SNHG17-207ENST00000449469 ERICH6Q7L0X2 663 aa22.73■■□□□ 1.23
SNHG17-207ENST00000449469 WASHC2CQ9Y4E1 1318 aa22.72■■□□□ 1.23
SNHG17-207ENST00000449469 ATP10AO60312 1499 aa22.72■■□□□ 1.23
SNHG17-207ENST00000449469 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
SNHG17-207ENST00000449469 SYCP2Q9BX26 1530 aa22.71■■□□□ 1.23
SNHG17-207ENST00000449469 MYT1LQ9UL68 1186 aa22.7■■□□□ 1.23
SNHG17-207ENST00000449469 PRDM15P57071 1507 aaPredicted RBP22.7■■□□□ 1.22
SNHG17-207ENST00000449469 ARHGAP5Q13017 1502 aa22.69■■□□□ 1.22
SNHG17-207ENST00000449469 PARD3Q8TEW0 1356 aa22.69■■□□□ 1.22
SNHG17-207ENST00000449469 MAGI2Q86UL8 1455 aa22.69■■□□□ 1.22
SNHG17-207ENST00000449469 MYO5CQ9NQX4 1742 aa22.68■■□□□ 1.22
SNHG17-207ENST00000449469 COL17A1Q9UMD9 1497 aaPredicted RBP22.68■■□□□ 1.22
SNHG17-207ENST00000449469 NLRP13Q86W25 1043 aa22.68■■□□□ 1.22
SNHG17-207ENST00000449469 KDM2AQ9Y2K7 1162 aa22.68■■□□□ 1.22
SNHG17-207ENST00000449469 DUOX2Q9NRD8 1548 aa22.68■■□□□ 1.22
SNHG17-207ENST00000449469 TTC37Q6PGP7 1564 aa22.67■■□□□ 1.22
SNHG17-207ENST00000449469 ERBINQ96RT1 1412 aa22.67■■□□□ 1.22
SNHG17-207ENST00000449469 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.66■■□□□ 1.22
SNHG17-207ENST00000449469 PDE3BQ13370 1112 aa22.66■■□□□ 1.22
SNHG17-207ENST00000449469 A2MP01023 1474 aa22.65■■□□□ 1.22
SNHG17-207ENST00000449469 PLA2R1Q13018 1463 aa22.64■■□□□ 1.22
SNHG17-207ENST00000449469 ABCC2Q92887 1545 aa22.64■■□□□ 1.22
SNHG17-207ENST00000449469 CCDC136Q96JN2 1154 aa22.64■■□□□ 1.22
SNHG17-207ENST00000449469 CHD1O14646 1710 aa22.6■■□□□ 1.21
SNHG17-207ENST00000449469 RNF17Q9BXT8 1623 aaKnown RBP22.59■■□□□ 1.21
SNHG17-207ENST00000449469 PER1O15534 1290 aaPredicted RBP22.55■■□□□ 1.2
SNHG17-207ENST00000449469 CNGB1Q14028 1251 aaPredicted RBP22.55■■□□□ 1.2
SNHG17-207ENST00000449469 RRP1P56182 461 aaKnown RBP22.54■■□□□ 1.2
SNHG17-207ENST00000449469 BLMP54132 1417 aaPredicted RBP22.53■■□□□ 1.2
SNHG17-207ENST00000449469 STAC3Q96MF2 364 aa22.53■■□□□ 1.2
SNHG17-207ENST00000449469 PLCH2O75038 1416 aa22.53■■□□□ 1.2
SNHG17-207ENST00000449469 TMF1P82094 1093 aa22.52■■□□□ 1.2
SNHG17-207ENST00000449469 TESK2Q96S53 571 aa22.52■■□□□ 1.2
SNHG17-207ENST00000449469 UHRF1BP1LA0JNW5 1464 aa22.5■■□□□ 1.19
SNHG17-207ENST00000449469 ABCC1P33527 1531 aa22.5■■□□□ 1.19
SNHG17-207ENST00000449469 RCAN3Q9UKA8 241 aa22.5■■□□□ 1.19
SNHG17-207ENST00000449469 ARAP3Q8WWN8 1544 aa22.5■■□□□ 1.19
SNHG17-207ENST00000449469 NBPF1Q3BBV0 1214 aa22.49■■□□□ 1.19
SNHG17-207ENST00000449469 NOP58Q9Y2X3 529 aaKnown RBP22.49■■□□□ 1.19
SNHG17-207ENST00000449469 DISP3Q9P2K9 1392 aa22.48■■□□□ 1.19
SNHG17-207ENST00000449469 ANP32AP39687 249 aaKnown RBP22.48■■□□□ 1.19
SNHG17-207ENST00000449469 RGL3Q3MIN7 710 aa22.47■■□□□ 1.19
SNHG17-207ENST00000449469 RTEL1-TNFRSF6BF6WH68 1400 aa22.46■■□□□ 1.19
SNHG17-207ENST00000449469 EFCAB2Q5VUJ9 269 aa22.45■■□□□ 1.18
SNHG17-207ENST00000449469 TRPM2O94759 1503 aa22.45■■□□□ 1.18
SNHG17-207ENST00000449469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.45■■□□□ 1.182e-6■□□□□ 8.3
SNHG17-207ENST00000449469 IQGAP1P46940 1657 aa22.44■■□□□ 1.18
SNHG17-207ENST00000449469 MADDQ8WXG6 1647 aa22.44■■□□□ 1.18
SNHG17-207ENST00000449469 ZCCHC11Q5TAX3 1644 aaKnown RBP22.43■■□□□ 1.18
SNHG17-207ENST00000449469 NEURL4Q96JN8 1562 aa22.43■■□□□ 1.18
SNHG17-207ENST00000449469 TCERG1O14776 1098 aaKnown RBP22.42■■□□□ 1.18
SNHG17-207ENST00000449469 SCAPERQ9BY12 1400 aa22.42■■□□□ 1.18
SNHG17-207ENST00000449469 SPHKAPQ2M3C7 1700 aa22.41■■□□□ 1.18
SNHG17-207ENST00000449469 SYNMO15061 1565 aa22.41■■□□□ 1.18
SNHG17-207ENST00000449469 CDCA8Q53HL2 280 aa22.41■■□□□ 1.18
SNHG17-207ENST00000449469 CEP152O94986 1710 aa22.41■■□□□ 1.18
SNHG17-207ENST00000449469 DEPDC5O75140 1603 aa22.4■■□□□ 1.18
SNHG17-207ENST00000449469 IPO9Q96P70 1041 aaKnown RBP22.4■■□□□ 1.18
SNHG17-207ENST00000449469 PANK3Q9H999 370 aa22.4■■□□□ 1.18
SNHG17-207ENST00000449469 PTPRTO14522 1441 aa22.39■■□□□ 1.17
SNHG17-207ENST00000449469 MS4A1P11836 297 aa22.38■■□□□ 1.17
SNHG17-207ENST00000449469 WDR7Q9Y4E6 1490 aa22.37■■□□□ 1.17
SNHG17-207ENST00000449469 KIAA1210Q9ULL0 1709 aa22.37■■□□□ 1.17
SNHG17-207ENST00000449469 SCAF11Q99590 1463 aaKnown RBP22.36■■□□□ 1.17
SNHG17-207ENST00000449469 ZFYVE16Q7Z3T8 1539 aa22.36■■□□□ 1.17
SNHG17-207ENST00000449469 ERCC6L2Q5T890 1561 aa22.36■■□□□ 1.17
SNHG17-207ENST00000449469 TET3O43151 1660 aa22.36■■□□□ 1.17
SNHG17-207ENST00000449469 SLC24A1O60721 1099 aa22.35■■□□□ 1.17
SNHG17-207ENST00000449469 BCL11AQ9H165 835 aa22.35■■□□□ 1.17
SNHG17-207ENST00000449469 NPC1L1Q9UHC9 1359 aa22.35■■□□□ 1.17
SNHG17-207ENST00000449469 CLASP1Q7Z460 1538 aa22.35■■□□□ 1.17
SNHG17-207ENST00000449469 CC2D1BQ5T0F9 858 aaKnown RBP22.34■■□□□ 1.17
SNHG17-207ENST00000449469 EXOC6Q8TAG9 804 aa22.34■■□□□ 1.17
SNHG17-207ENST00000449469 EIF3AQ14152 1382 aaKnown RBP22.34■■□□□ 1.17
SNHG17-207ENST00000449469 TRAPPC8Q9Y2L5 1435 aa22.34■■□□□ 1.17
SNHG17-207ENST00000449469 SPAG9O60271 1321 aaKnown RBP22.31■■□□□ 1.16
SNHG17-207ENST00000449469 VWDEQ8N2E2 1590 aa22.31■■□□□ 1.16
SNHG17-207ENST00000449469 PIK3C2GO75747 1445 aa22.31■■□□□ 1.16
SNHG17-207ENST00000449469 KNSTRNQ9Y448 316 aa22.3■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 137.5 ms