RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-210ENST00000449058 ERICH6BQ5W0A0 696 aa23.19■■□□□ 1.3
TOM1-210ENST00000449058 TRPM1Q7Z4N2 1603 aa23.18■■□□□ 1.3
TOM1-210ENST00000449058 DCAF11Q8TEB1 546 aa23.18■■□□□ 1.3
TOM1-210ENST00000449058 E9PCH4 1651 aa23.17■■□□□ 1.3
TOM1-210ENST00000449058 PLA2R1Q13018 1463 aa23.16■■□□□ 1.3
TOM1-210ENST00000449058 KDM2AQ9Y2K7 1162 aa23.16■■□□□ 1.3
TOM1-210ENST00000449058 CCDC144AA2RUR9 1427 aa23.16■■□□□ 1.3
TOM1-210ENST00000449058 POLR3GLQ9BT43 218 aa23.14■■□□□ 1.3
TOM1-210ENST00000449058 PRAG1Q86YV5 1406 aa23.14■■□□□ 1.3
TOM1-210ENST00000449058 DUOX2Q9NRD8 1548 aa23.14■■□□□ 1.3
TOM1-210ENST00000449058 ZCCHC11Q5TAX3 1644 aaKnown RBP23.14■■□□□ 1.3
TOM1-210ENST00000449058 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
TOM1-210ENST00000449058 MAGI2Q86UL8 1455 aa23.13■■□□□ 1.29
TOM1-210ENST00000449058 ST20-MTHFSA0A0A6YYL1 179 aa23.13■■□□□ 1.29
TOM1-210ENST00000449058 UHRF1BP1LA0JNW5 1464 aa23.12■■□□□ 1.29
TOM1-210ENST00000449058 IRX6P78412 446 aaPredicted RBP23.12■■□□□ 1.29
TOM1-210ENST00000449058 PLCH2O75038 1416 aa23.11■■□□□ 1.29
TOM1-210ENST00000449058 LAMC1P11047 1609 aa23.1■■□□□ 1.29
TOM1-210ENST00000449058 ERBINQ96RT1 1412 aa23.09■■□□□ 1.29
TOM1-210ENST00000449058 ATP10AO60312 1499 aa23.09■■□□□ 1.29
TOM1-210ENST00000449058 A2MP01023 1474 aa23.09■■□□□ 1.29
TOM1-210ENST00000449058 GPRASP1Q5JY77 1395 aa23.07■■□□□ 1.28
TOM1-210ENST00000449058 ABCC1P33527 1531 aa23.07■■□□□ 1.28
TOM1-210ENST00000449058 KTN1Q86UP2 1357 aaKnown RBP23.07■■□□□ 1.28
TOM1-210ENST00000449058 SMG6Q86US8 1419 aaKnown RBP23.06■■□□□ 1.28
TOM1-210ENST00000449058 RBM19Q9Y4C8 960 aaKnown RBP23.06■■□□□ 1.28
TOM1-210ENST00000449058 PPP4R2Q9NY27 417 aa23.04■■□□□ 1.28
TOM1-210ENST00000449058 PNISRQ8TF01 805 aaKnown RBP23.04■■□□□ 1.28
TOM1-210ENST00000449058 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.04■■□□□ 1.28
TOM1-210ENST00000449058 EIF2AK4Q9P2K8 1649 aaKnown RBP23.03■■□□□ 1.28
TOM1-210ENST00000449058 PRDM15P57071 1507 aaPredicted RBP23.03■■□□□ 1.28
TOM1-210ENST00000449058 EFCAB2Q5VUJ9 269 aa23.02■■□□□ 1.28
TOM1-210ENST00000449058 CNGB1Q14028 1251 aaPredicted RBP23■■□□□ 1.27
TOM1-210ENST00000449058 ARAP3Q8WWN8 1544 aa22.99■■□□□ 1.27
TOM1-210ENST00000449058 BRD4O60885 1362 aaPredicted RBP22.99■■□□□ 1.27
TOM1-210ENST00000449058 LRPPRCP42704 1394 aaKnown RBP22.99■■□□□ 1.27
TOM1-210ENST00000449058 RALBP1Q15311 655 aa22.99■■□□□ 1.27
TOM1-210ENST00000449058 RGL3Q3MIN7 710 aa22.99■■□□□ 1.27
TOM1-210ENST00000449058 TRAPPC8Q9Y2L5 1435 aa22.98■■□□□ 1.27
TOM1-210ENST00000449058 MYBBP1AQ9BQG0 1328 aaKnown RBP22.98■■□□□ 1.27
TOM1-210ENST00000449058 NBPF1Q3BBV0 1214 aa22.98■■□□□ 1.27
TOM1-210ENST00000449058 TMC1Q8TDI8 760 aa22.98■■□□□ 1.27
TOM1-210ENST00000449058 COL17A1Q9UMD9 1497 aaPredicted RBP22.97■■□□□ 1.27
TOM1-210ENST00000449058 RNF17Q9BXT8 1623 aaKnown RBP22.96■■□□□ 1.27
TOM1-210ENST00000449058 NUDCQ9Y266 331 aa22.96■■□□□ 1.27
TOM1-210ENST00000449058 RTEL1-TNFRSF6BF6WH68 1400 aa22.94■■□□□ 1.26
TOM1-210ENST00000449058 RNF123Q5XPI4 1314 aa22.93■■□□□ 1.26
TOM1-210ENST00000449058 PARD3Q8TEW0 1356 aa22.92■■□□□ 1.26
TOM1-210ENST00000449058 ZFYVE16Q7Z3T8 1539 aa22.92■■□□□ 1.26
TOM1-210ENST00000449058 TESK2Q96S53 571 aa22.91■■□□□ 1.26
TOM1-210ENST00000449058 DEPDC5O75140 1603 aa22.9■■□□□ 1.26
TOM1-210ENST00000449058 PER1O15534 1290 aaPredicted RBP22.89■■□□□ 1.26
TOM1-210ENST00000449058 ANP32EQ9BTT0 268 aa22.88■■□□□ 1.25
TOM1-210ENST00000449058 DISP3Q9P2K9 1392 aa22.88■■□□□ 1.25
TOM1-210ENST00000449058 TRPM2O94759 1503 aa22.88■■□□□ 1.25
TOM1-210ENST00000449058 SPAG9O60271 1321 aaKnown RBP22.87■■□□□ 1.25
TOM1-210ENST00000449058 MADDQ8WXG6 1647 aa22.87■■□□□ 1.25
TOM1-210ENST00000449058 CEP152O94986 1710 aa22.87■■□□□ 1.25
TOM1-210ENST00000449058 SPHKAPQ2M3C7 1700 aa22.86■■□□□ 1.25
TOM1-210ENST00000449058 ABCA9Q8IUA7 1624 aa22.86■■□□□ 1.25
TOM1-210ENST00000449058 WASHC2CQ9Y4E1 1318 aa22.85■■□□□ 1.25
TOM1-210ENST00000449058 NLRP13Q86W25 1043 aa22.85■■□□□ 1.25
TOM1-210ENST00000449058 B4GALNT3Q6L9W6 998 aa22.84■■□□□ 1.25
TOM1-210ENST00000449058 INO80Q9ULG1 1556 aaPredicted RBP22.84■■□□□ 1.25
TOM1-210ENST00000449058 WDR7Q9Y4E6 1490 aa22.84■■□□□ 1.25
TOM1-210ENST00000449058 IQGAP1P46940 1657 aa22.84■■□□□ 1.25
TOM1-210ENST00000449058 PTPRTO14522 1441 aa22.84■■□□□ 1.25
TOM1-210ENST00000449058 TET3O43151 1660 aa22.83■■□□□ 1.25
TOM1-210ENST00000449058 AFAP1Q8N556 730 aa22.82■■□□□ 1.24
TOM1-210ENST00000449058 VWDEQ8N2E2 1590 aa22.81■■□□□ 1.24
TOM1-210ENST00000449058 ATP7AQ04656 1500 aa22.81■■□□□ 1.24
TOM1-210ENST00000449058 CLTCL1P53675 1640 aa22.8■■□□□ 1.24
TOM1-210ENST00000449058 TMF1P82094 1093 aa22.79■■□□□ 1.24
TOM1-210ENST00000449058 FANCIQ9NVI1 1328 aa22.79■■□□□ 1.24
TOM1-210ENST00000449058 FANCAO15360 1455 aa22.78■■□□□ 1.24
TOM1-210ENST00000449058 ZMYM4Q5VZL5 1548 aa22.77■■□□□ 1.24
TOM1-210ENST00000449058 STAC3Q96MF2 364 aa22.76■■□□□ 1.23
TOM1-210ENST00000449058 INSRP06213 1382 aa22.76■■□□□ 1.23
TOM1-210ENST00000449058 PANK3Q9H999 370 aa22.75■■□□□ 1.23
TOM1-210ENST00000449058 NEURL4Q96JN8 1562 aa22.75■■□□□ 1.23
TOM1-210ENST00000449058 SENP3-EIF4A1A0A087X0R7 540 aa22.75■■□□□ 1.23
TOM1-210ENST00000449058 SCAPERQ9BY12 1400 aa22.74■■□□□ 1.23
TOM1-210ENST00000449058 KIAA1210Q9ULL0 1709 aa22.72■■□□□ 1.23
TOM1-210ENST00000449058 MROH1Q8NDA8 1641 aa22.72■■□□□ 1.23
TOM1-210ENST00000449058 KANK1Q14678 1352 aa22.71■■□□□ 1.23
TOM1-210ENST00000449058 ADGRL1O94910 1474 aa22.71■■□□□ 1.23
TOM1-210ENST00000449058 SCAF11Q99590 1463 aaKnown RBP22.7■■□□□ 1.22
TOM1-210ENST00000449058 BLMP54132 1417 aaPredicted RBP22.7■■□□□ 1.22
TOM1-210ENST00000449058 CC2D1BQ5T0F9 858 aaKnown RBP22.7■■□□□ 1.22
TOM1-210ENST00000449058 PDE3BQ13370 1112 aa22.69■■□□□ 1.22
TOM1-210ENST00000449058 MSH5O43196 834 aa22.69■■□□□ 1.22
TOM1-210ENST00000449058 SYNMO15061 1565 aa22.68■■□□□ 1.22
TOM1-210ENST00000449058 ASXL2Q76L83 1435 aa22.65■■□□□ 1.22
TOM1-210ENST00000449058 CCDC136Q96JN2 1154 aa22.64■■□□□ 1.22
TOM1-210ENST00000449058 KIDINS220Q9ULH0 1771 aa22.64■■□□□ 1.21
TOM1-210ENST00000449058 KIF3BO15066 747 aa22.64■■□□□ 1.21
TOM1-210ENST00000449058 MYOM1P52179 1685 aa22.63■■□□□ 1.21
TOM1-210ENST00000449058 RRP1P56182 461 aaKnown RBP22.63■■□□□ 1.21
TOM1-210ENST00000449058 EFCAB6Q5THR3 1501 aa22.63■■□□□ 1.21
TOM1-210ENST00000449058 KIF1BO60333 1816 aa22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms