RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 TCERG1O14776 1098 aaKnown RBP11.63□□□□□ -0.55
SMC6-207ENST00000448223 DNMBPQ6XZF7 1577 aa11.63□□□□□ -0.55
SMC6-207ENST00000448223 NOC3LQ8WTT2 800 aaKnown RBP11.62□□□□□ -0.55
SMC6-207ENST00000448223 CDCA7LQ96GN5 454 aa11.62□□□□□ -0.55
SMC6-207ENST00000448223 EHBP1L1Q8N3D4 1523 aa11.62□□□□□ -0.55
SMC6-207ENST00000448223 USP47Q96K76 1375 aa11.62□□□□□ -0.55
SMC6-207ENST00000448223 MTERF4Q7Z6M4 381 aaKnown RBP11.61□□□□□ -0.55
SMC6-207ENST00000448223 CC2D2AQ9P2K1 1620 aa11.59□□□□□ -0.55
SMC6-207ENST00000448223 SNAPC4Q5SXM2 1469 aa11.59□□□□□ -0.55
SMC6-207ENST00000448223 CCDC146Q8IYE0 955 aa11.59□□□□□ -0.55
SMC6-207ENST00000448223 KNSTRNQ9Y448 316 aa11.59□□□□□ -0.55
SMC6-207ENST00000448223 SYAP1Q96A49 352 aaPredicted RBP11.58□□□□□ -0.56
SMC6-207ENST00000448223 ROCK2O75116 1388 aaKnown RBP11.58□□□□□ -0.56
SMC6-207ENST00000448223 CDK13Q14004 1512 aaKnown RBP11.58□□□□□ -0.56
SMC6-207ENST00000448223 FRAT1Q92837 279 aaPredicted RBP11.58□□□□□ -0.56
SMC6-207ENST00000448223 CUL7Q14999 1698 aa11.58□□□□□ -0.56
SMC6-207ENST00000448223 HTATSF1O43719 755 aaKnown RBP11.58□□□□□ -0.56
SMC6-207ENST00000448223 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.58□□□□□ -0.56
SMC6-207ENST00000448223 FAM43AQ8N2R8 423 aa11.58□□□□□ -0.56
SMC6-207ENST00000448223 NOM1Q5C9Z4 860 aaKnown RBP11.57□□□□□ -0.56
SMC6-207ENST00000448223 CCDC66A2RUB6 948 aa11.57□□□□□ -0.56
SMC6-207ENST00000448223 TEX35Q5T0J7 233 aa11.57□□□□□ -0.56
SMC6-207ENST00000448223 NCOA1Q15788 1441 aa11.56□□□□□ -0.56
SMC6-207ENST00000448223 CTTNBP2Q8WZ74 1663 aa11.56□□□□□ -0.56
SMC6-207ENST00000448223 FTSJ3Q8IY81 847 aaKnown RBP11.56□□□□□ -0.56
SMC6-207ENST00000448223 GRIN2BQ13224 1484 aa11.55□□□□□ -0.56
SMC6-207ENST00000448223 CALD1Q05682 793 aaKnown RBP11.55□□□□□ -0.56
SMC6-207ENST00000448223 PDE4AP27815 886 aa11.55□□□□□ -0.56
SMC6-207ENST00000448223 IL27Q8NEV9 243 aa11.55□□□□□ -0.56
SMC6-207ENST00000448223 PANK3Q9H999 370 aa11.55□□□□□ -0.56
SMC6-207ENST00000448223 PRDM2Q13029 1718 aa11.55□□□□□ -0.56
SMC6-207ENST00000448223 RRP1P56182 461 aaKnown RBP11.54□□□□□ -0.56
SMC6-207ENST00000448223 NBPF1Q3BBV0 1214 aa11.54□□□□□ -0.56
SMC6-207ENST00000448223 RRP9O43818 475 aaKnown RBP11.54□□□□□ -0.56
SMC6-207ENST00000448223 CSPP1Q1MSJ5 1256 aa11.54□□□□□ -0.56
SMC6-207ENST00000448223 CRBNQ96SW2 442 aa11.54□□□□□ -0.56
SMC6-207ENST00000448223 GPS2Q13227 327 aa11.54□□□□□ -0.56
SMC6-207ENST00000448223 TPM2P07951 284 aa11.53□□□□□ -0.56
SMC6-207ENST00000448223 ANKRD30BQ9BXX2 1392 aa11.53□□□□□ -0.56
SMC6-207ENST00000448223 EPRSP07814 1512 aaKnown RBP11.53□□□□□ -0.56
SMC6-207ENST00000448223 UGGT2Q9NYU1 1516 aa11.52□□□□□ -0.56
SMC6-207ENST00000448223 KTN1Q86UP2 1357 aaKnown RBP11.52□□□□□ -0.56
SMC6-207ENST00000448223 NLRP13Q86W25 1043 aa11.52□□□□□ -0.57
SMC6-207ENST00000448223 DAPK1P53355 1430 aa11.52□□□□□ -0.57
SMC6-207ENST00000448223 PNISRQ8TF01 805 aaKnown RBP11.52□□□□□ -0.57
SMC6-207ENST00000448223 URB2Q14146 1524 aaKnown RBP11.51□□□□□ -0.57
SMC6-207ENST00000448223 JPH4Q96JJ6 628 aa11.51□□□□□ -0.57
SMC6-207ENST00000448223 HECW1Q76N89 1606 aa11.51□□□□□ -0.57
SMC6-207ENST00000448223 SMG6Q86US8 1419 aaKnown RBP11.51□□□□□ -0.57
SMC6-207ENST00000448223 DDX11L8A8MPP1 907 aa11.51□□□□□ -0.57
SMC6-207ENST00000448223 ANKRD30AQ9BXX3 1397 aa11.51□□□□□ -0.57
SMC6-207ENST00000448223 MIA2Q96PC5 1412 aa11.5□□□□□ -0.57
SMC6-207ENST00000448223 TMF1P82094 1093 aa11.5□□□□□ -0.57
SMC6-207ENST00000448223 SAFB2Q14151 953 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMC6-207ENST00000448223 KIF15Q9NS87 1388 aa11.5□□□□□ -0.57
SMC6-207ENST00000448223 MYBBP1AQ9BQG0 1328 aaKnown RBP11.5□□□□□ -0.57
SMC6-207ENST00000448223 RALBP1Q15311 655 aa11.49□□□□□ -0.57
SMC6-207ENST00000448223 KDM6BO15054 1643 aa11.49□□□□□ -0.57
SMC6-207ENST00000448223 RPRD2Q5VT52 1461 aaKnown RBP11.48□□□□□ -0.57
SMC6-207ENST00000448223 RRP7AQ9Y3A4 280 aaKnown RBP11.48□□□□□ -0.57
SMC6-207ENST00000448223 MAGI3Q5TCQ9 1506 aa11.48□□□□□ -0.57
SMC6-207ENST00000448223 CLUAP1Q96AJ1 413 aa11.48□□□□□ -0.57
SMC6-207ENST00000448223 BCL2L13Q9BXK5 485 aa11.48□□□□□ -0.57
SMC6-207ENST00000448223 PRG4Q92954 1404 aaPredicted RBP11.48□□□□□ -0.57
SMC6-207ENST00000448223 ABCC5O15440 1437 aa11.48□□□□□ -0.57
SMC6-207ENST00000448223 THOC2Q8NI27 1593 aaKnown RBP11.47□□□□□ -0.57
SMC6-207ENST00000448223 NUTM2DQ5VT03 806 aaPredicted RBP11.46□□□□□ -0.57
SMC6-207ENST00000448223 CWC15Q9P013 229 aaKnown RBP11.46□□□□□ -0.57
SMC6-207ENST00000448223 BRPF3Q9ULD4 1205 aa11.46□□□□□ -0.57
SMC6-207ENST00000448223 CFAP44Q96MT7 982 aa11.46□□□□□ -0.57
SMC6-207ENST00000448223 ZMYND15Q9H091 742 aa11.46□□□□□ -0.58
SMC6-207ENST00000448223 PATL2C9JE40 543 aaKnown RBP11.46□□□□□ -0.58
SMC6-207ENST00000448223 PHF14O94880 888 aa11.45□□□□□ -0.58
SMC6-207ENST00000448223 MS4A1P11836 297 aa11.45□□□□□ -0.58
SMC6-207ENST00000448223 SKOR2Q2VWA4 1001 aaPredicted RBP11.45□□□□□ -0.58
SMC6-207ENST00000448223 CHMP4BQ9H444 224 aaKnown RBP11.45□□□□□ -0.58
SMC6-207ENST00000448223 FGD1P98174 961 aa11.45□□□□□ -0.58
SMC6-207ENST00000448223 ADAMTS8Q9UP79 889 aa11.45□□□□□ -0.58
SMC6-207ENST00000448223 R3HCC1Q9Y3T6 440 aaKnown RBP11.45□□□□□ -0.58
SMC6-207ENST00000448223 MCCP23508 829 aa11.45□□□□□ -0.58
SMC6-207ENST00000448223 TCOF1Q13428 1488 aaKnown RBP11.44□□□□□ -0.58
SMC6-207ENST00000448223 C20orf194Q5TEA3 1177 aa11.44□□□□□ -0.58
SMC6-207ENST00000448223 TAF3Q5VWG9 929 aa11.44□□□□□ -0.58
SMC6-207ENST00000448223 KDM5BQ9UGL1 1544 aa11.44□□□□□ -0.58
SMC6-207ENST00000448223 ROCK1Q13464 1354 aa11.43□□□□□ -0.58
SMC6-207ENST00000448223 KIAA1107Q9UPP5 1409 aa11.43□□□□□ -0.58
SMC6-207ENST00000448223 IQGAP2Q13576 1575 aa11.43□□□□□ -0.58
SMC6-207ENST00000448223 APAF1O14727 1248 aa11.43□□□□□ -0.58
SMC6-207ENST00000448223 TPM4P67936 248 aa11.43□□□□□ -0.58
SMC6-207ENST00000448223 SAMD9Q5K651 1589 aa11.43□□□□□ -0.58
SMC6-207ENST00000448223 TAF7LQ5H9L4 462 aa11.43□□□□□ -0.58
SMC6-207ENST00000448223 RDXP35241 583 aaKnown RBP11.43□□□□□ -0.58
SMC6-207ENST00000448223 ERCC6Q03468 1493 aa11.42□□□□□ -0.58
SMC6-207ENST00000448223 MAPK8IP2Q13387 824 aaPredicted RBP11.42□□□□□ -0.58
SMC6-207ENST00000448223 ANKRD50Q9ULJ7 1429 aa11.42□□□□□ -0.58
SMC6-207ENST00000448223 DDX49Q9Y6V7 483 aaKnown RBP11.42□□□□□ -0.58
SMC6-207ENST00000448223 LAMC3Q9Y6N6 1575 aa11.41□□□□□ -0.58
SMC6-207ENST00000448223 RBM10P98175 930 aaKnown RBP11.41□□□□□ -0.58
SMC6-207ENST00000448223 KCNJ4P48050 445 aa11.41□□□□□ -0.58
SMC6-207ENST00000448223 DENND4BO75064 1496 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms