RNA–Protein interactions for RNA: ENST00000448136.5

SNHG16-201, Transcript of small nucleolar RNA host gene 16, humanhuman

TSL 1 (best) BASIC

Gene SNHG16, Length 3,607 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG16-201ENST00000448136 SEC24BO95487 1268 aa13.23□□□□□ -0.29
SNHG16-201ENST00000448136 NAP1L5Q96NT1 182 aaPredicted RBP13.23□□□□□ -0.29
SNHG16-201ENST00000448136 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
SNHG16-201ENST00000448136 CC2D2AQ9P2K1 1620 aa13.22□□□□□ -0.29
SNHG16-201ENST00000448136 CUL7Q14999 1698 aa13.22□□□□□ -0.29
SNHG16-201ENST00000448136 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.29
SNHG16-201ENST00000448136 PER1O15534 1290 aaPredicted RBP13.2□□□□□ -0.3
SNHG16-201ENST00000448136 KIF15Q9NS87 1388 aa13.2□□□□□ -0.3
SNHG16-201ENST00000448136 NBPF1Q3BBV0 1214 aa13.2□□□□□ -0.3
SNHG16-201ENST00000448136 DNAJC5BQ9UF47 199 aa13.2□□□□□ -0.3
SNHG16-201ENST00000448136 BRD4O60885 1362 aaPredicted RBP13.19□□□□□ -0.3
SNHG16-201ENST00000448136 RSPH6AQ9H0K4 717 aa13.19□□□□□ -0.3
SNHG16-201ENST00000448136 LAMC3Q9Y6N6 1575 aa13.19□□□□□ -0.3
SNHG16-201ENST00000448136 DDRGK1Q96HY6 314 aa13.18□□□□□ -0.3
SNHG16-201ENST00000448136 ZNF777Q9ULD5 760 aaPredicted RBP13.18□□□□□ -0.3
SNHG16-201ENST00000448136 USP19O94966 1318 aa13.18□□□□□ -0.3
SNHG16-201ENST00000448136 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
SNHG16-201ENST00000448136 KIF14Q15058 1648 aa13.17□□□□□ -0.3
SNHG16-201ENST00000448136 SPINK5Q9NQ38 1064 aaPredicted RBP13.17□□□□□ -0.3
SNHG16-201ENST00000448136 E9PCH4 1651 aa13.17□□□□□ -0.3
SNHG16-201ENST00000448136 KIAA0586Q9BVV6 1533 aa13.17□□□□□ -0.3
SNHG16-201ENST00000448136 DNMT1P26358 1616 aaKnown RBP13.16□□□□□ -0.3
SNHG16-201ENST00000448136 PLEKHH1Q9ULM0 1364 aa13.16□□□□□ -0.3
SNHG16-201ENST00000448136 PANK2Q9BZ23 570 aa13.15□□□□□ -0.3
SNHG16-201ENST00000448136 ADAMTS8Q9UP79 889 aa13.15□□□□□ -0.3
SNHG16-201ENST00000448136 PARD3Q8TEW0 1356 aa13.15□□□□□ -0.3
SNHG16-201ENST00000448136 FAM43AQ8N2R8 423 aa13.15□□□□□ -0.3
SNHG16-201ENST00000448136 GAPVD1Q14C86 1478 aa13.14□□□□□ -0.31
SNHG16-201ENST00000448136 KIAA1107Q9UPP5 1409 aa13.14□□□□□ -0.31
SNHG16-201ENST00000448136 ROCK1Q13464 1354 aa13.14□□□□□ -0.31
SNHG16-201ENST00000448136 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
SNHG16-201ENST00000448136 IGHDP01880 384 aa13.14□□□□□ -0.31
SNHG16-201ENST00000448136 NLRP13Q86W25 1043 aa13.13□□□□□ -0.31
SNHG16-201ENST00000448136 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
SNHG16-201ENST00000448136 RALBP1Q15311 655 aa13.12□□□□□ -0.31
SNHG16-201ENST00000448136 DISP3Q9P2K9 1392 aa13.12□□□□□ -0.31
SNHG16-201ENST00000448136 WDR62O43379 1518 aa13.12□□□□□ -0.31
SNHG16-201ENST00000448136 PRG4Q92954 1404 aaPredicted RBP13.12□□□□□ -0.31
SNHG16-201ENST00000448136 RALGAPBQ86X10 1494 aa13.11□□□□□ -0.31
SNHG16-201ENST00000448136 FAM161AQ3B820 660 aa13.11□□□□□ -0.31
SNHG16-201ENST00000448136 DUSP27Q5VZP5 1158 aa13.11□□□□□ -0.31
SNHG16-201ENST00000448136 ZNF608Q9ULD9 1512 aaPredicted RBP13.11□□□□□ -0.31
SNHG16-201ENST00000448136 BCAR3O75815 825 aa13.11□□□□□ -0.31
SNHG16-201ENST00000448136 RGL3Q3MIN7 710 aa13.11□□□□□ -0.31
SNHG16-201ENST00000448136 ARID3AQ99856 593 aa13.11□□□□□ -0.31
SNHG16-201ENST00000448136 PDS5BQ9NTI5 1447 aa13.1□□□□□ -0.31
SNHG16-201ENST00000448136 PANK3Q9H999 370 aa13.1□□□□□ -0.31
SNHG16-201ENST00000448136 HSP90AA2PQ14568 343 aaPredicted RBP13.08□□□□□ -0.31
SNHG16-201ENST00000448136 UHRF1BP1Q6BDS2 1440 aa13.08□□□□□ -0.32
SNHG16-201ENST00000448136 CCDC146Q8IYE0 955 aa13.08□□□□□ -0.32
SNHG16-201ENST00000448136 CAMSAP2Q08AD1 1489 aa13.08□□□□□ -0.32
SNHG16-201ENST00000448136 BLMP54132 1417 aaPredicted RBP13.08□□□□□ -0.32
SNHG16-201ENST00000448136 KTN1Q86UP2 1357 aaKnown RBP13.08□□□□□ -0.32
SNHG16-201ENST00000448136 ZBTB22O15209 634 aa13.07□□□□□ -0.32
SNHG16-201ENST00000448136 ROCK2O75116 1388 aaKnown RBP13.07□□□□□ -0.32
SNHG16-201ENST00000448136 PDE3BQ13370 1112 aa13.07□□□□□ -0.32
SNHG16-201ENST00000448136 NUP155O75694 1391 aa13.07□□□□□ -0.32
SNHG16-201ENST00000448136 NUP153P49790 1475 aaKnown RBP13.06□□□□□ -0.32
SNHG16-201ENST00000448136 PNNQ9H307 717 aaKnown RBP13.06□□□□□ -0.32
SNHG16-201ENST00000448136 TESK2Q96S53 571 aa13.06□□□□□ -0.32
SNHG16-201ENST00000448136 TNNQ9UQP3 1299 aa13.06□□□□□ -0.32
SNHG16-201ENST00000448136 CENPQQ7L2Z9 268 aaPredicted RBP13.05□□□□□ -0.32
SNHG16-201ENST00000448136 CFDP1Q9UEE9 299 aaPredicted RBP13.05□□□□□ -0.32
SNHG16-201ENST00000448136 XRCC6P12956 609 aaKnown RBP eCLIP13.04□□□□□ -0.324e-12■■■■■ 34.4
SNHG16-201ENST00000448136 ZMYM4Q5VZL5 1548 aa13.04□□□□□ -0.32
SNHG16-201ENST00000448136 GLIPR1L2Q4G1C9 344 aa13.03□□□□□ -0.32
SNHG16-201ENST00000448136 NLRP1Q9C000 1473 aa13.02□□□□□ -0.32
SNHG16-201ENST00000448136 HSP90AA1P07900 732 aaKnown RBP13.02□□□□□ -0.32
SNHG16-201ENST00000448136 ZNF521Q96K83 1311 aa13.02□□□□□ -0.32
SNHG16-201ENST00000448136 ANTXR1Q9H6X2 564 aa13.02□□□□□ -0.33
SNHG16-201ENST00000448136 ANKRD50Q9ULJ7 1429 aa13.02□□□□□ -0.33
SNHG16-201ENST00000448136 IQGAP2Q13576 1575 aa13.02□□□□□ -0.33
SNHG16-201ENST00000448136 A0A0U1RQG5 324 aaPredicted RBP13.01□□□□□ -0.33
SNHG16-201ENST00000448136 GPATCH8Q9UKJ3 1502 aaKnown RBP13.01□□□□□ -0.33
SNHG16-201ENST00000448136 KIF21AQ7Z4S6 1674 aa13□□□□□ -0.33
SNHG16-201ENST00000448136 PANK1Q8TE04 598 aa13□□□□□ -0.33
SNHG16-201ENST00000448136 MAGI2Q86UL8 1455 aa12.99□□□□□ -0.33
SNHG16-201ENST00000448136 KDM5DQ9BY66 1539 aa12.99□□□□□ -0.33
SNHG16-201ENST00000448136 DISP1Q96F81 1524 aa12.99□□□□□ -0.33
SNHG16-201ENST00000448136 ERBB4Q15303 1308 aa12.98□□□□□ -0.33
SNHG16-201ENST00000448136 TRPM1Q7Z4N2 1603 aa12.98□□□□□ -0.33
SNHG16-201ENST00000448136 HNRNPMP52272 730 aaKnown RBP eCLIP12.98□□□□□ -0.33
SNHG16-201ENST00000448136 PPP2R1AP30153 589 aa12.97□□□□□ -0.33
SNHG16-201ENST00000448136 PLB1Q6P1J6 1458 aa12.97□□□□□ -0.33
SNHG16-201ENST00000448136 PRAG1Q86YV5 1406 aa12.97□□□□□ -0.33
SNHG16-201ENST00000448136 SLFN5Q08AF3 891 aa12.97□□□□□ -0.33
SNHG16-201ENST00000448136 COG6Q9Y2V7 657 aa12.97□□□□□ -0.33
SNHG16-201ENST00000448136 CEP170Q5SW79 1584 aa12.96□□□□□ -0.33
SNHG16-201ENST00000448136 ZBTB7CA1YPR0 619 aa12.96□□□□□ -0.33
SNHG16-201ENST00000448136 APAF1O14727 1248 aa12.96□□□□□ -0.33
SNHG16-201ENST00000448136 ADGBQ8N7X0 1667 aa12.96□□□□□ -0.33
SNHG16-201ENST00000448136 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.33
SNHG16-201ENST00000448136 GOLGA6L3A6NEY3 463 aa12.96□□□□□ -0.34
SNHG16-201ENST00000448136 TBC1D2Q9BYX2 928 aa12.96□□□□□ -0.34
SNHG16-201ENST00000448136 RBM10P98175 930 aaKnown RBP12.95□□□□□ -0.34
SNHG16-201ENST00000448136 CROCC2H7BZ55 1655 aa12.95□□□□□ -0.34
SNHG16-201ENST00000448136 COL17A1Q9UMD9 1497 aaPredicted RBP12.95□□□□□ -0.34
SNHG16-201ENST00000448136 VIRMAQ69YN4 1812 aaKnown RBP12.94□□□□□ -0.34
SNHG16-201ENST00000448136 GOLGA2Q08379 1002 aa12.94□□□□□ -0.34
SNHG16-201ENST00000448136 PODXL2Q9NZ53 605 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms