RNA–Protein interactions for RNA: ENST00000446916.2

ATRN-202, Transcript of attractin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATRN, Length 3,921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRN-202ENST00000446916 ZBTB7CA1YPR0 619 aa19.08■□□□□ 0.64
ATRN-202ENST00000446916 SRPK2P78362 688 aaKnown RBP19.07■□□□□ 0.64
ATRN-202ENST00000446916 ARID3AQ99856 593 aa19.07■□□□□ 0.64
ATRN-202ENST00000446916 ABCC5O15440 1437 aa19.07■□□□□ 0.64
ATRN-202ENST00000446916 CTTNBP2Q8WZ74 1663 aa19.06■□□□□ 0.64
ATRN-202ENST00000446916 SOX12O15370 315 aa19.05■□□□□ 0.64
ATRN-202ENST00000446916 DISP1Q96F81 1524 aa19.05■□□□□ 0.64
ATRN-202ENST00000446916 NUTM2FA1L443 756 aa19.05■□□□□ 0.64
ATRN-202ENST00000446916 NEUROD2Q15784 382 aa19.04■□□□□ 0.64
ATRN-202ENST00000446916 RGS3P49796 1198 aa19.04■□□□□ 0.64
ATRN-202ENST00000446916 NBPF8Q3BBV2 869 aa19.04■□□□□ 0.64
ATRN-202ENST00000446916 PBRM1Q86U86 1689 aa19.03■□□□□ 0.64
ATRN-202ENST00000446916 A0A0U1RQG5 324 aaPredicted RBP19.03■□□□□ 0.64
ATRN-202ENST00000446916 CAMSAP2Q08AD1 1489 aa19.03■□□□□ 0.64
ATRN-202ENST00000446916 CCER2I3L3R5 266 aa19.03■□□□□ 0.64
ATRN-202ENST00000446916 CCDC184Q52MB2 194 aa19.03■□□□□ 0.64
ATRN-202ENST00000446916 CDCA8Q53HL2 280 aa19.03■□□□□ 0.64
ATRN-202ENST00000446916 MAP3K1Q13233 1512 aa19.02■□□□□ 0.64
ATRN-202ENST00000446916 PTPN23Q9H3S7 1636 aa19.02■□□□□ 0.64
ATRN-202ENST00000446916 UGGT2Q9NYU1 1516 aa19.01■□□□□ 0.63
ATRN-202ENST00000446916 NUP160Q12769 1436 aa19.01■□□□□ 0.63
ATRN-202ENST00000446916 KIAA0556O60303 1618 aa19■□□□□ 0.63
ATRN-202ENST00000446916 SKAP1Q86WV1 359 aa19■□□□□ 0.63
ATRN-202ENST00000446916 NBPF1Q3BBV0 1214 aa18.99■□□□□ 0.63
ATRN-202ENST00000446916 GPATCH8Q9UKJ3 1502 aaKnown RBP18.99■□□□□ 0.63
ATRN-202ENST00000446916 RAPGEF6Q8TEU7 1601 aa18.98■□□□□ 0.63
ATRN-202ENST00000446916 LMOD2Q6P5Q4 547 aa18.98■□□□□ 0.63
ATRN-202ENST00000446916 SPRYD3Q8NCJ5 442 aa18.98■□□□□ 0.63
ATRN-202ENST00000446916 USP47Q96K76 1375 aa18.97■□□□□ 0.63
ATRN-202ENST00000446916 TMEM132EQ6IEE7 984 aa18.97■□□□□ 0.63
ATRN-202ENST00000446916 CEP170Q5SW79 1584 aa18.96■□□□□ 0.63
ATRN-202ENST00000446916 CD109Q6YHK3 1445 aa18.96■□□□□ 0.63
ATRN-202ENST00000446916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.95■□□□□ 0.621e-6■■■■■ 32.9
ATRN-202ENST00000446916 NCOA1Q15788 1441 aa18.95■□□□□ 0.62
ATRN-202ENST00000446916 GSE1Q14687 1217 aa18.94■□□□□ 0.62
ATRN-202ENST00000446916 FRAT1Q92837 279 aaPredicted RBP18.94■□□□□ 0.62
ATRN-202ENST00000446916 CFAP70Q5T0N1 1121 aa18.92■□□□□ 0.62
ATRN-202ENST00000446916 KIF14Q15058 1648 aa18.91■□□□□ 0.62
ATRN-202ENST00000446916 GZF1Q9H116 711 aaPredicted RBP18.91■□□□□ 0.62
ATRN-202ENST00000446916 AMER1Q5JTC6 1135 aaPredicted RBP18.91■□□□□ 0.62
ATRN-202ENST00000446916 CCDC141Q6ZP82 1450 aa18.9■□□□□ 0.62
ATRN-202ENST00000446916 KIAA1107Q9UPP5 1409 aa18.89■□□□□ 0.61
ATRN-202ENST00000446916 U2SURPO15042 1029 aaKnown RBP18.88■□□□□ 0.61
ATRN-202ENST00000446916 PANK3Q9H999 370 aa18.88■□□□□ 0.61
ATRN-202ENST00000446916 HSP90AA1P07900 732 aaKnown RBP18.88■□□□□ 0.61
ATRN-202ENST00000446916 WDR97A6NE52 1622 aa18.87■□□□□ 0.61
ATRN-202ENST00000446916 PODXL2Q9NZ53 605 aa18.87■□□□□ 0.61
ATRN-202ENST00000446916 WASHC2AQ641Q2 1341 aa18.87■□□□□ 0.61
ATRN-202ENST00000446916 MINK1Q8N4C8 1332 aaPredicted RBP18.87■□□□□ 0.61
ATRN-202ENST00000446916 ASXL2Q76L83 1435 aa18.87■□□□□ 0.61
ATRN-202ENST00000446916 AKNAQ7Z591 1439 aa18.87■□□□□ 0.61
ATRN-202ENST00000446916 ADGRL1O94910 1474 aa18.86■□□□□ 0.61
ATRN-202ENST00000446916 TPRNQ4KMQ1 711 aa18.86■□□□□ 0.61
ATRN-202ENST00000446916 KIF7Q2M1P5 1343 aa18.86■□□□□ 0.61
ATRN-202ENST00000446916 PLEKHH2Q8IVE3 1493 aa18.86■□□□□ 0.61
ATRN-202ENST00000446916 C11orf95C9JLR9 678 aaPredicted RBP18.86■□□□□ 0.61
ATRN-202ENST00000446916 ROCK1Q13464 1354 aa18.86■□□□□ 0.61
ATRN-202ENST00000446916 MAGI3Q5TCQ9 1506 aa18.85■□□□□ 0.61
ATRN-202ENST00000446916 MORC1Q86VD1 984 aa18.85■□□□□ 0.61
ATRN-202ENST00000446916 PDE4AP27815 886 aa18.85■□□□□ 0.61
ATRN-202ENST00000446916 HDGFP51858 240 aaKnown RBP18.85■□□□□ 0.61
ATRN-202ENST00000446916 SLKQ9H2G2 1235 aaPredicted RBP18.84■□□□□ 0.61
ATRN-202ENST00000446916 FANCAO15360 1455 aa18.84■□□□□ 0.61
ATRN-202ENST00000446916 VGFO15240 615 aaPredicted RBP18.84■□□□□ 0.61
ATRN-202ENST00000446916 ZMYND15Q9H091 742 aa18.83■□□□□ 0.6
ATRN-202ENST00000446916 NFKBIBQ15653 356 aa18.82■□□□□ 0.6
ATRN-202ENST00000446916 SAMD9Q5K651 1589 aa18.81■□□□□ 0.6
ATRN-202ENST00000446916 HSP90AA2PQ14568 343 aaPredicted RBP18.81■□□□□ 0.6
ATRN-202ENST00000446916 EXOC6Q8TAG9 804 aa18.81■□□□□ 0.6
ATRN-202ENST00000446916 ANKRD30BQ9BXX2 1392 aa18.81■□□□□ 0.6
ATRN-202ENST00000446916 CFAP53Q96M91 514 aa18.8■□□□□ 0.6
ATRN-202ENST00000446916 PRKRIP1Q9H875 184 aaPredicted RBP18.8■□□□□ 0.6
ATRN-202ENST00000446916 PLIN1O60240 522 aa18.8■□□□□ 0.6
ATRN-202ENST00000446916 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.8■□□□□ 0.66e-7■■■□□ 18.9
ATRN-202ENST00000446916 KTN1Q86UP2 1357 aaKnown RBP18.79■□□□□ 0.6
ATRN-202ENST00000446916 TRAPPC8Q9Y2L5 1435 aa18.79■□□□□ 0.6
ATRN-202ENST00000446916 FBXO31Q5XUX0 539 aaPredicted RBP18.79■□□□□ 0.6
ATRN-202ENST00000446916 EID1Q9Y6B2 187 aa18.78■□□□□ 0.6
ATRN-202ENST00000446916 FRAT2O75474 233 aaPredicted RBP18.77■□□□□ 0.6
ATRN-202ENST00000446916 RSPH6AQ9H0K4 717 aa18.77■□□□□ 0.6
ATRN-202ENST00000446916 SYCP2Q9BX26 1530 aa18.76■□□□□ 0.59
ATRN-202ENST00000446916 CCDC7Q96M83 1385 aa18.76■□□□□ 0.59
ATRN-202ENST00000446916 PNNQ9H307 717 aaKnown RBP18.76■□□□□ 0.59
ATRN-202ENST00000446916 CFAP43Q8NDM7 1665 aa18.75■□□□□ 0.59
ATRN-202ENST00000446916 PLCH2O75038 1416 aa18.75■□□□□ 0.59
ATRN-202ENST00000446916 A0A0G2JS52 829 aa18.74■□□□□ 0.59
ATRN-202ENST00000446916 CEBPAP49715 358 aaPredicted RBP18.74■□□□□ 0.59
ATRN-202ENST00000446916 CCDC146Q8IYE0 955 aa18.74■□□□□ 0.59
ATRN-202ENST00000446916 ERCC6L2Q5T890 1561 aa18.74■□□□□ 0.59
ATRN-202ENST00000446916 EIF3AQ14152 1382 aaKnown RBP18.73■□□□□ 0.59
ATRN-202ENST00000446916 DDRGK1Q96HY6 314 aa18.72■□□□□ 0.59
ATRN-202ENST00000446916 HDGFL2Q7Z4V5 671 aaPredicted RBP18.71■□□□□ 0.59
ATRN-202ENST00000446916 UPF2Q9HAU5 1272 aaKnown RBP18.71■□□□□ 0.59
ATRN-202ENST00000446916 WDR7Q9Y4E6 1490 aa18.71■□□□□ 0.59
ATRN-202ENST00000446916 CABP2Q9NPB3 220 aa18.7■□□□□ 0.58
ATRN-202ENST00000446916 MAPKBP1O60336 1514 aa18.7■□□□□ 0.58
ATRN-202ENST00000446916 HAP1P54257 671 aaPredicted RBP18.69■□□□□ 0.58
ATRN-202ENST00000446916 TRIM44Q96DX7 344 aaPredicted RBP18.69■□□□□ 0.58
ATRN-202ENST00000446916 U2AF1L5P0DN76 240 aaPredicted RBP18.69■□□□□ 0.58
ATRN-202ENST00000446916 U2AF1Q01081 240 aaKnown RBP eCLIP18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms