RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 CD109Q6YHK3 1445 aa13.31□□□□□ -0.28
COL6A4P1-201ENST00000446690 UNC13BO14795 1591 aa13.3□□□□□ -0.28
COL6A4P1-201ENST00000446690 KIF3BO15066 747 aa13.3□□□□□ -0.28
COL6A4P1-201ENST00000446690 ZFYVE16Q7Z3T8 1539 aa13.29□□□□□ -0.28
COL6A4P1-201ENST00000446690 POLR3GLQ9BT43 218 aa13.28□□□□□ -0.28
COL6A4P1-201ENST00000446690 CARD11Q9BXL7 1154 aa13.28□□□□□ -0.28
COL6A4P1-201ENST00000446690 PLA2R1Q13018 1463 aa13.27□□□□□ -0.28
COL6A4P1-201ENST00000446690 ATP7AQ04656 1500 aa13.27□□□□□ -0.29
COL6A4P1-201ENST00000446690 SPATA31E1Q6ZUB1 1445 aa13.26□□□□□ -0.29
COL6A4P1-201ENST00000446690 USP47Q96K76 1375 aa13.26□□□□□ -0.29
COL6A4P1-201ENST00000446690 CCDC7Q96M83 1385 aa13.26□□□□□ -0.29
COL6A4P1-201ENST00000446690 IQGAP3Q86VI3 1631 aa13.26□□□□□ -0.29
COL6A4P1-201ENST00000446690 UHRF1BP1Q6BDS2 1440 aa13.25□□□□□ -0.29
COL6A4P1-201ENST00000446690 KANK1Q14678 1352 aa13.25□□□□□ -0.29
COL6A4P1-201ENST00000446690 DHX29Q7Z478 1369 aaKnown RBP13.25□□□□□ -0.29
COL6A4P1-201ENST00000446690 KIF7Q2M1P5 1343 aa13.25□□□□□ -0.29
COL6A4P1-201ENST00000446690 MAGI2Q86UL8 1455 aa13.24□□□□□ -0.29
COL6A4P1-201ENST00000446690 CCER2I3L3R5 266 aa13.24□□□□□ -0.29
COL6A4P1-201ENST00000446690 ZNF518AQ6AHZ1 1483 aa13.23□□□□□ -0.29
COL6A4P1-201ENST00000446690 RAPGEF3O95398 923 aa13.23□□□□□ -0.29
COL6A4P1-201ENST00000446690 ROCK2O75116 1388 aaKnown RBP13.23□□□□□ -0.29
COL6A4P1-201ENST00000446690 INO80Q9ULG1 1556 aaPredicted RBP13.22□□□□□ -0.29
COL6A4P1-201ENST00000446690 RALGAPBQ86X10 1494 aa13.21□□□□□ -0.3
COL6A4P1-201ENST00000446690 ST20-MTHFSA0A0A6YYL1 179 aa13.21□□□□□ -0.3
COL6A4P1-201ENST00000446690 CNTLNQ9NXG0 1405 aa13.2□□□□□ -0.3
COL6A4P1-201ENST00000446690 NBPF1Q3BBV0 1214 aa13.2□□□□□ -0.3
COL6A4P1-201ENST00000446690 CNGB1Q14028 1251 aaPredicted RBP13.19□□□□□ -0.3
COL6A4P1-201ENST00000446690 GGT6Q6P531 493 aa13.19□□□□□ -0.3
COL6A4P1-201ENST00000446690 POGZQ7Z3K3 1410 aa13.19□□□□□ -0.3
COL6A4P1-201ENST00000446690 PRAG1Q86YV5 1406 aa13.18□□□□□ -0.3
COL6A4P1-201ENST00000446690 A2MP01023 1474 aa13.18□□□□□ -0.3
COL6A4P1-201ENST00000446690 ATP10AO60312 1499 aa13.18□□□□□ -0.3
COL6A4P1-201ENST00000446690 FAM69CQ0P6D2 419 aa13.18□□□□□ -0.3
COL6A4P1-201ENST00000446690 KIDINS220Q9ULH0 1771 aa13.16□□□□□ -0.3
COL6A4P1-201ENST00000446690 KDM5CP41229 1560 aa13.16□□□□□ -0.3
COL6A4P1-201ENST00000446690 CFAP74Q9C0B2 1584 aa13.16□□□□□ -0.3
COL6A4P1-201ENST00000446690 RIMBP3CA6NJZ7 1639 aa13.16□□□□□ -0.3
COL6A4P1-201ENST00000446690 RIMBP3BA6NNM3 1639 aa13.16□□□□□ -0.3
COL6A4P1-201ENST00000446690 RIMBP3Q9UFD9 1639 aa13.16□□□□□ -0.3
COL6A4P1-201ENST00000446690 E9PCH4 1651 aa13.16□□□□□ -0.3
COL6A4P1-201ENST00000446690 DEPDC5O75140 1603 aa13.14□□□□□ -0.31
COL6A4P1-201ENST00000446690 NEO1Q92859 1461 aa13.14□□□□□ -0.31
COL6A4P1-201ENST00000446690 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
COL6A4P1-201ENST00000446690 MLH3Q9UHC1 1453 aa13.14□□□□□ -0.31
COL6A4P1-201ENST00000446690 PTPRTO14522 1441 aa13.13□□□□□ -0.31
COL6A4P1-201ENST00000446690 BCORL1Q5H9F3 1711 aa13.13□□□□□ -0.31
COL6A4P1-201ENST00000446690 WASHC2CQ9Y4E1 1318 aa13.12□□□□□ -0.31
COL6A4P1-201ENST00000446690 EIF2AK4Q9P2K8 1649 aaKnown RBP13.12□□□□□ -0.31
COL6A4P1-201ENST00000446690 ARID4BQ4LE39 1312 aaPredicted RBP13.12□□□□□ -0.31
COL6A4P1-201ENST00000446690 CHGAP10645 457 aaKnown RBP13.12□□□□□ -0.31
COL6A4P1-201ENST00000446690 TRPM2O94759 1503 aa13.11□□□□□ -0.31
COL6A4P1-201ENST00000446690 PRDM15P57071 1507 aaPredicted RBP13.11□□□□□ -0.31
COL6A4P1-201ENST00000446690 TET3O43151 1660 aa13.11□□□□□ -0.31
COL6A4P1-201ENST00000446690 VWDEQ8N2E2 1590 aa13.11□□□□□ -0.31
COL6A4P1-201ENST00000446690 CCDC184Q52MB2 194 aa13.11□□□□□ -0.31
COL6A4P1-201ENST00000446690 HECW2Q9P2P5 1572 aa13.1□□□□□ -0.31
COL6A4P1-201ENST00000446690 MROH1Q8NDA8 1641 aa13.1□□□□□ -0.31
COL6A4P1-201ENST00000446690 TRPM1Q7Z4N2 1603 aa13.1□□□□□ -0.31
COL6A4P1-201ENST00000446690 CLTCL1P53675 1640 aa13.08□□□□□ -0.31
COL6A4P1-201ENST00000446690 MRS2Q9HD23 443 aa13.08□□□□□ -0.31
COL6A4P1-201ENST00000446690 SPHKAPQ2M3C7 1700 aa13.08□□□□□ -0.31
COL6A4P1-201ENST00000446690 FRMPD1Q5SYB0 1578 aa13.07□□□□□ -0.32
COL6A4P1-201ENST00000446690 UGGT1Q9NYU2 1555 aa13.07□□□□□ -0.32
COL6A4P1-201ENST00000446690 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
COL6A4P1-201ENST00000446690 FAM9BQ8IZU0 186 aa13.07□□□□□ -0.32
COL6A4P1-201ENST00000446690 MAP3K4Q9Y6R4 1608 aa13.07□□□□□ -0.32
COL6A4P1-201ENST00000446690 HNRNPUQ00839 825 aaKnown RBP eCLIP13.07□□□□□ -0.32
COL6A4P1-201ENST00000446690 ABCA6Q8N139 1617 aa13.06□□□□□ -0.32
COL6A4P1-201ENST00000446690 POLR1AO95602 1720 aaPredicted RBP13.06□□□□□ -0.32
COL6A4P1-201ENST00000446690 EFCAB6Q5THR3 1501 aa13.06□□□□□ -0.32
COL6A4P1-201ENST00000446690 STAC3Q96MF2 364 aa13.06□□□□□ -0.32
COL6A4P1-201ENST00000446690 YEATS2Q9ULM3 1422 aa13.06□□□□□ -0.32
COL6A4P1-201ENST00000446690 GLI2P10070 1586 aa13.05□□□□□ -0.32
COL6A4P1-201ENST00000446690 TESK2Q96S53 571 aa13.05□□□□□ -0.32
COL6A4P1-201ENST00000446690 TMF1P82094 1093 aa13.04□□□□□ -0.32
COL6A4P1-201ENST00000446690 PPRC1Q5VV67 1664 aaKnown RBP13.04□□□□□ -0.32
COL6A4P1-201ENST00000446690 NPATQ14207 1427 aa13.04□□□□□ -0.32
COL6A4P1-201ENST00000446690 CEP152O94986 1710 aa13.04□□□□□ -0.32
COL6A4P1-201ENST00000446690 LMTK2Q8IWU2 1503 aa13.03□□□□□ -0.32
COL6A4P1-201ENST00000446690 RNF17Q9BXT8 1623 aaKnown RBP13.03□□□□□ -0.32
COL6A4P1-201ENST00000446690 CFAP70Q5T0N1 1121 aa13.03□□□□□ -0.32
COL6A4P1-201ENST00000446690 ADGRF5Q8IZF2 1346 aa13.03□□□□□ -0.32
COL6A4P1-201ENST00000446690 DIP2CQ9Y2E4 1556 aa13.02□□□□□ -0.33
COL6A4P1-201ENST00000446690 DISP3Q9P2K9 1392 aa13.02□□□□□ -0.33
COL6A4P1-201ENST00000446690 DIP2BQ9P265 1576 aa13.02□□□□□ -0.33
COL6A4P1-201ENST00000446690 MADDQ8WXG6 1647 aa13.01□□□□□ -0.33
COL6A4P1-201ENST00000446690 RICTORQ6R327 1708 aa13□□□□□ -0.33
COL6A4P1-201ENST00000446690 ABCC3O15438 1527 aa13□□□□□ -0.33
COL6A4P1-201ENST00000446690 TSPOAP1O95153 1857 aa13□□□□□ -0.33
COL6A4P1-201ENST00000446690 NUTM2DQ5VT03 806 aaPredicted RBP12.99□□□□□ -0.33
COL6A4P1-201ENST00000446690 LAMC1P11047 1609 aa12.98□□□□□ -0.33
COL6A4P1-201ENST00000446690 PANK3Q9H999 370 aa12.98□□□□□ -0.33
COL6A4P1-201ENST00000446690 CFAP65Q6ZU64 1925 aaKnown RBP12.98□□□□□ -0.33
COL6A4P1-201ENST00000446690 TMC1Q8TDI8 760 aa12.97□□□□□ -0.33
COL6A4P1-201ENST00000446690 NOS1P29475 1434 aa12.97□□□□□ -0.33
COL6A4P1-201ENST00000446690 SCAF11Q99590 1463 aaKnown RBP12.97□□□□□ -0.33
COL6A4P1-201ENST00000446690 COL17A1Q9UMD9 1497 aaPredicted RBP12.97□□□□□ -0.33
COL6A4P1-201ENST00000446690 MLECQ14165 292 aa12.96□□□□□ -0.33
COL6A4P1-201ENST00000446690 SENP3Q9H4L4 574 aaPredicted RBP12.96□□□□□ -0.33
COL6A4P1-201ENST00000446690 KIF1BO60333 1816 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms