RNA–Protein interactions for RNA: ENST00000445770.3

LINC01949-201, Transcript of long intergenic non-protein coding RNA 1949, humanhuman

TSL 1 (best) BASIC

Gene LINC01949, Length 2,721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01949-201ENST00000445770 PREX2Q70Z35 1606 aa13.55□□□□□ -0.24
LINC01949-201ENST00000445770 TRAPPC8Q9Y2L5 1435 aa13.55□□□□□ -0.24
LINC01949-201ENST00000445770 SALL2Q9Y467 1007 aaPredicted RBP13.55□□□□□ -0.24
LINC01949-201ENST00000445770 SHANK2Q9UPX8 1470 aa13.54□□□□□ -0.24
LINC01949-201ENST00000445770 ROCK2O75116 1388 aaKnown RBP13.54□□□□□ -0.24
LINC01949-201ENST00000445770 ABCC2Q92887 1545 aa13.54□□□□□ -0.24
LINC01949-201ENST00000445770 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.24
LINC01949-201ENST00000445770 PLA2R1Q13018 1463 aa13.52□□□□□ -0.25
LINC01949-201ENST00000445770 DHX29Q7Z478 1369 aaKnown RBP13.51□□□□□ -0.25
LINC01949-201ENST00000445770 SHROOM2Q13796 1616 aa13.51□□□□□ -0.25
LINC01949-201ENST00000445770 ZCCHC11Q5TAX3 1644 aaKnown RBP13.5□□□□□ -0.25
LINC01949-201ENST00000445770 EFCAB2Q5VUJ9 269 aa13.49□□□□□ -0.25
LINC01949-201ENST00000445770 PIAS4Q8N2W9 510 aaPredicted RBP13.49□□□□□ -0.25
LINC01949-201ENST00000445770 ARHGEF5Q12774 1597 aa13.49□□□□□ -0.25
LINC01949-201ENST00000445770 KDM5CP41229 1560 aa13.49□□□□□ -0.25
LINC01949-201ENST00000445770 SPAG9O60271 1321 aaKnown RBP13.47□□□□□ -0.25
LINC01949-201ENST00000445770 RALGAPBQ86X10 1494 aa13.46□□□□□ -0.25
LINC01949-201ENST00000445770 CC2D1BQ5T0F9 858 aaKnown RBP13.46□□□□□ -0.25
LINC01949-201ENST00000445770 MYO5CQ9NQX4 1742 aa13.46□□□□□ -0.25
LINC01949-201ENST00000445770 PLCH2O75038 1416 aa13.46□□□□□ -0.26
LINC01949-201ENST00000445770 A2MP01023 1474 aa13.45□□□□□ -0.26
LINC01949-201ENST00000445770 CLASP1Q7Z460 1538 aa13.45□□□□□ -0.26
LINC01949-201ENST00000445770 KIF3BO15066 747 aa13.44□□□□□ -0.26
LINC01949-201ENST00000445770 TMC1Q8TDI8 760 aa13.44□□□□□ -0.26
LINC01949-201ENST00000445770 RSPH4AQ5TD94 716 aa13.44□□□□□ -0.26
LINC01949-201ENST00000445770 KDM5DQ9BY66 1539 aa13.43□□□□□ -0.26
LINC01949-201ENST00000445770 UHRF1BP1Q6BDS2 1440 aa13.43□□□□□ -0.26
LINC01949-201ENST00000445770 PRAG1Q86YV5 1406 aa13.43□□□□□ -0.26
LINC01949-201ENST00000445770 B4GALNT3Q6L9W6 998 aa13.43□□□□□ -0.26
LINC01949-201ENST00000445770 DISP3Q9P2K9 1392 aa13.43□□□□□ -0.26
LINC01949-201ENST00000445770 SCAPERQ9BY12 1400 aa13.42□□□□□ -0.26
LINC01949-201ENST00000445770 ABCC1P33527 1531 aa13.39□□□□□ -0.27
LINC01949-201ENST00000445770 ZBED9Q6R2W3 1325 aa13.39□□□□□ -0.27
LINC01949-201ENST00000445770 CHGAP10645 457 aaKnown RBP13.38□□□□□ -0.27
LINC01949-201ENST00000445770 PNISRQ8TF01 805 aaKnown RBP13.38□□□□□ -0.27
LINC01949-201ENST00000445770 TESK2Q96S53 571 aa13.38□□□□□ -0.27
LINC01949-201ENST00000445770 FANCAO15360 1455 aa13.38□□□□□ -0.27
LINC01949-201ENST00000445770 PANK3Q9H999 370 aa13.37□□□□□ -0.27
LINC01949-201ENST00000445770 NUTM2DQ5VT03 806 aaPredicted RBP13.37□□□□□ -0.27
LINC01949-201ENST00000445770 DUOX2Q9NRD8 1548 aa13.37□□□□□ -0.27
LINC01949-201ENST00000445770 UGGT1Q9NYU2 1555 aa13.37□□□□□ -0.27
LINC01949-201ENST00000445770 POLR1AO95602 1720 aaPredicted RBP13.36□□□□□ -0.27
LINC01949-201ENST00000445770 UNC13BO14795 1591 aa13.36□□□□□ -0.27
LINC01949-201ENST00000445770 WDR7Q9Y4E6 1490 aa13.35□□□□□ -0.27
LINC01949-201ENST00000445770 ASXL2Q76L83 1435 aa13.35□□□□□ -0.27
LINC01949-201ENST00000445770 GGT6Q6P531 493 aa13.35□□□□□ -0.27
LINC01949-201ENST00000445770 TRPM1Q7Z4N2 1603 aa13.34□□□□□ -0.27
LINC01949-201ENST00000445770 PLXNC1O60486 1568 aa13.34□□□□□ -0.27
LINC01949-201ENST00000445770 RBM19Q9Y4C8 960 aaKnown RBP13.33□□□□□ -0.27
LINC01949-201ENST00000445770 ADGRL1O94910 1474 aa13.33□□□□□ -0.27
LINC01949-201ENST00000445770 MAST1Q9Y2H9 1570 aa13.33□□□□□ -0.28
LINC01949-201ENST00000445770 IQGAP3Q86VI3 1631 aa13.33□□□□□ -0.28
LINC01949-201ENST00000445770 ERBINQ96RT1 1412 aa13.33□□□□□ -0.28
LINC01949-201ENST00000445770 ZFYVE16Q7Z3T8 1539 aa13.33□□□□□ -0.28
LINC01949-201ENST00000445770 RAPGEF3O95398 923 aa13.33□□□□□ -0.28
LINC01949-201ENST00000445770 UHRF1BP1LA0JNW5 1464 aa13.32□□□□□ -0.28
LINC01949-201ENST00000445770 CFAP65Q6ZU64 1925 aaKnown RBP13.32□□□□□ -0.28
LINC01949-201ENST00000445770 CFAP70Q5T0N1 1121 aa13.32□□□□□ -0.28
LINC01949-201ENST00000445770 PER1O15534 1290 aaPredicted RBP13.31□□□□□ -0.28
LINC01949-201ENST00000445770 MYBBP1AQ9BQG0 1328 aaKnown RBP13.31□□□□□ -0.28
LINC01949-201ENST00000445770 CDCA7LQ96GN5 454 aa13.31□□□□□ -0.28
LINC01949-201ENST00000445770 ATP10AO60312 1499 aa13.31□□□□□ -0.28
LINC01949-201ENST00000445770 E9PCH4 1651 aa13.3□□□□□ -0.28
LINC01949-201ENST00000445770 OSCARQ8IYS5 282 aa13.3□□□□□ -0.28
LINC01949-201ENST00000445770 ADGRF5Q8IZF2 1346 aa13.3□□□□□ -0.28
LINC01949-201ENST00000445770 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
LINC01949-201ENST00000445770 KTN1Q86UP2 1357 aaKnown RBP13.28□□□□□ -0.28
LINC01949-201ENST00000445770 TMF1P82094 1093 aa13.28□□□□□ -0.28
LINC01949-201ENST00000445770 ATP7AQ04656 1500 aa13.28□□□□□ -0.28
LINC01949-201ENST00000445770 MAGI2Q86UL8 1455 aa13.27□□□□□ -0.28
LINC01949-201ENST00000445770 ARID4BQ4LE39 1312 aaPredicted RBP13.27□□□□□ -0.28
LINC01949-201ENST00000445770 NUDCQ9Y266 331 aa13.27□□□□□ -0.29
LINC01949-201ENST00000445770 COL17A1Q9UMD9 1497 aaPredicted RBP13.26□□□□□ -0.29
LINC01949-201ENST00000445770 CLTCL1P53675 1640 aa13.26□□□□□ -0.29
LINC01949-201ENST00000445770 GPRASP1Q5JY77 1395 aa13.25□□□□□ -0.29
LINC01949-201ENST00000445770 RALBP1Q15311 655 aa13.25□□□□□ -0.29
LINC01949-201ENST00000445770 TMEM132EQ6IEE7 984 aa13.25□□□□□ -0.29
LINC01949-201ENST00000445770 NLRP13Q86W25 1043 aa13.25□□□□□ -0.29
LINC01949-201ENST00000445770 PPP4R2Q9NY27 417 aa13.25□□□□□ -0.29
LINC01949-201ENST00000445770 PRDM15P57071 1507 aaPredicted RBP13.24□□□□□ -0.29
LINC01949-201ENST00000445770 CYB5RLQ6IPT4 315 aa13.24□□□□□ -0.29
LINC01949-201ENST00000445770 PLIN1O60240 522 aa13.24□□□□□ -0.29
LINC01949-201ENST00000445770 PARD3Q8TEW0 1356 aa13.23□□□□□ -0.29
LINC01949-201ENST00000445770 TNNT2P45379 298 aaPredicted RBP13.23□□□□□ -0.29
LINC01949-201ENST00000445770 SAFB2Q14151 953 aaKnown RBP eCLIP13.23□□□□□ -0.29
LINC01949-201ENST00000445770 KANK1Q14678 1352 aa13.23□□□□□ -0.29
LINC01949-201ENST00000445770 TRAK1Q9UPV9 953 aa13.23□□□□□ -0.29
LINC01949-201ENST00000445770 BRD4O60885 1362 aaPredicted RBP13.22□□□□□ -0.29
LINC01949-201ENST00000445770 CCDC146Q8IYE0 955 aa13.21□□□□□ -0.29
LINC01949-201ENST00000445770 CD109Q6YHK3 1445 aa13.21□□□□□ -0.29
LINC01949-201ENST00000445770 SMG6Q86US8 1419 aaKnown RBP13.21□□□□□ -0.29
LINC01949-201ENST00000445770 ABCA9Q8IUA7 1624 aa13.21□□□□□ -0.29
LINC01949-201ENST00000445770 SKAP1Q86WV1 359 aa13.21□□□□□ -0.29
LINC01949-201ENST00000445770 KNSTRNQ9Y448 316 aa13.21□□□□□ -0.29
LINC01949-201ENST00000445770 LRPPRCP42704 1394 aaKnown RBP13.21□□□□□ -0.3
LINC01949-201ENST00000445770 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
LINC01949-201ENST00000445770 ADAMTS8Q9UP79 889 aa13.2□□□□□ -0.3
LINC01949-201ENST00000445770 MADDQ8WXG6 1647 aa13.2□□□□□ -0.3
LINC01949-201ENST00000445770 INO80Q9ULG1 1556 aaPredicted RBP13.2□□□□□ -0.3
LINC01949-201ENST00000445770 TRPM2O94759 1503 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms