RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 MS4A3Q96HJ5 214 aa13.11□□□□□ -0.31
LINC02549-201ENST00000445346 ATP10AO60312 1499 aa13.1□□□□□ -0.31
LINC02549-201ENST00000445346 CEBPAP49715 358 aaPredicted RBP13.1□□□□□ -0.31
LINC02549-201ENST00000445346 C9orf84Q5VXU9 1444 aa13.09□□□□□ -0.31
LINC02549-201ENST00000445346 FMN1Q68DA7 1419 aa13.09□□□□□ -0.31
LINC02549-201ENST00000445346 FER1L4A9Z1Z3 1794 aa13.08□□□□□ -0.32
LINC02549-201ENST00000445346 MAP3K13O43283 966 aa13.08□□□□□ -0.32
LINC02549-201ENST00000445346 DCAF8Q5TAQ9 597 aa13.08□□□□□ -0.32
LINC02549-201ENST00000445346 AFAP1Q8N556 730 aa13.08□□□□□ -0.32
LINC02549-201ENST00000445346 FAM212AQ96EL1 285 aa13.08□□□□□ -0.32
LINC02549-201ENST00000445346 SIGLEC1Q9BZZ2 1709 aa13.08□□□□□ -0.32
LINC02549-201ENST00000445346 PAK3O75914 559 aaPredicted RBP13.07□□□□□ -0.32
LINC02549-201ENST00000445346 PYGBP11216 843 aa13.07□□□□□ -0.32
LINC02549-201ENST00000445346 ESF1Q9H501 851 aaKnown RBP13.07□□□□□ -0.32
LINC02549-201ENST00000445346 CLIP1P30622 1438 aa13.05□□□□□ -0.32
LINC02549-201ENST00000445346 ARHGEF12Q9NZN5 1544 aa13.05□□□□□ -0.32
LINC02549-201ENST00000445346 ZNF518AQ6AHZ1 1483 aa13.04□□□□□ -0.32
LINC02549-201ENST00000445346 ARHGAP5Q13017 1502 aa13.04□□□□□ -0.32
LINC02549-201ENST00000445346 UHRF1BP1Q6BDS2 1440 aa13.04□□□□□ -0.32
LINC02549-201ENST00000445346 MYO5CQ9NQX4 1742 aa13.03□□□□□ -0.32
LINC02549-201ENST00000445346 TROQ12816 1431 aaPredicted RBP13.03□□□□□ -0.32
LINC02549-201ENST00000445346 KIF14Q15058 1648 aa13.02□□□□□ -0.33
LINC02549-201ENST00000445346 ARHGAP35Q9NRY4 1499 aa13.01□□□□□ -0.33
LINC02549-201ENST00000445346 PREX1Q8TCU6 1659 aa13.01□□□□□ -0.33
LINC02549-201ENST00000445346 PKD2Q13563 968 aa13□□□□□ -0.33
LINC02549-201ENST00000445346 DISP3Q9P2K9 1392 aa12.99□□□□□ -0.33
LINC02549-201ENST00000445346 IFNL1Q8IU54 200 aa12.99□□□□□ -0.33
LINC02549-201ENST00000445346 CIZ1Q9ULV3 898 aaPredicted RBP12.99□□□□□ -0.33
LINC02549-201ENST00000445346 KDM5CP41229 1560 aa12.97□□□□□ -0.33
LINC02549-201ENST00000445346 RNF25Q96BH1 459 aaPredicted RBP12.96□□□□□ -0.33
LINC02549-201ENST00000445346 ZNF777Q9ULD5 760 aaPredicted RBP12.96□□□□□ -0.33
LINC02549-201ENST00000445346 MLH3Q9UHC1 1453 aa12.96□□□□□ -0.34
LINC02549-201ENST00000445346 SETD1BQ9UPS6 1966 aaKnown RBP12.96□□□□□ -0.34
LINC02549-201ENST00000445346 GSE1Q14687 1217 aa12.95□□□□□ -0.34
LINC02549-201ENST00000445346 PCDHB8Q9UN66 801 aa12.95□□□□□ -0.34
LINC02549-201ENST00000445346 PCDHB13Q9Y5F0 798 aa12.95□□□□□ -0.34
LINC02549-201ENST00000445346 TRAPPC8Q9Y2L5 1435 aa12.95□□□□□ -0.34
LINC02549-201ENST00000445346 DIP2CQ9Y2E4 1556 aa12.94□□□□□ -0.34
LINC02549-201ENST00000445346 PELP1Q8IZL8 1130 aaKnown RBP12.94□□□□□ -0.34
LINC02549-201ENST00000445346 PTPRTO14522 1441 aa12.94□□□□□ -0.34
LINC02549-201ENST00000445346 STRCQ7RTU9 1775 aa12.93□□□□□ -0.34
LINC02549-201ENST00000445346 ILDR2Q71H61 639 aa12.92□□□□□ -0.34
LINC02549-201ENST00000445346 REREQ9P2R6 1566 aa12.92□□□□□ -0.34
LINC02549-201ENST00000445346 AGLP35573 1532 aa12.92□□□□□ -0.34
LINC02549-201ENST00000445346 CCDC18Q5T9S5 1454 aa12.91□□□□□ -0.34
LINC02549-201ENST00000445346 CNTLNQ9NXG0 1405 aa12.91□□□□□ -0.34
LINC02549-201ENST00000445346 ABCA6Q8N139 1617 aa12.91□□□□□ -0.34
LINC02549-201ENST00000445346 CDC42BPBQ9Y5S2 1711 aa12.91□□□□□ -0.34
LINC02549-201ENST00000445346 C3P01024 1663 aa12.9□□□□□ -0.34
LINC02549-201ENST00000445346 CASKIN1Q8WXD9 1431 aa12.9□□□□□ -0.34
LINC02549-201ENST00000445346 ABCC1P33527 1531 aa12.9□□□□□ -0.34
LINC02549-201ENST00000445346 SOCS7O14512 581 aa12.9□□□□□ -0.34
LINC02549-201ENST00000445346 SPAG9O60271 1321 aaKnown RBP12.89□□□□□ -0.35
LINC02549-201ENST00000445346 CHRM1P11229 460 aaPredicted RBP12.89□□□□□ -0.35
LINC02549-201ENST00000445346 HNRNPMP52272 730 aaKnown RBP eCLIP12.89□□□□□ -0.35
LINC02549-201ENST00000445346 BMP2KQ9NSY1 1161 aaPredicted RBP12.89□□□□□ -0.35
LINC02549-201ENST00000445346 PREX2Q70Z35 1606 aa12.88□□□□□ -0.35
LINC02549-201ENST00000445346 ZMYM3Q14202 1370 aa12.88□□□□□ -0.35
LINC02549-201ENST00000445346 LRRIQ1Q96JM4 1722 aa12.88□□□□□ -0.35
LINC02549-201ENST00000445346 NCOA1Q15788 1441 aa12.88□□□□□ -0.35
LINC02549-201ENST00000445346 NCKAP5LQ9HCH0 1330 aa12.87□□□□□ -0.35
LINC02549-201ENST00000445346 ITSN2Q9NZM3 1697 aa12.86□□□□□ -0.35
LINC02549-201ENST00000445346 GGT6Q6P531 493 aa12.86□□□□□ -0.35
LINC02549-201ENST00000445346 CFDP1Q9UEE9 299 aaPredicted RBP12.86□□□□□ -0.35
LINC02549-201ENST00000445346 KIDINS220Q9ULH0 1771 aa12.85□□□□□ -0.35
LINC02549-201ENST00000445346 ATMINO43313 823 aaPredicted RBP12.85□□□□□ -0.35
LINC02549-201ENST00000445346 NPATQ14207 1427 aa12.85□□□□□ -0.35
LINC02549-201ENST00000445346 CLCN6P51797 869 aa12.84□□□□□ -0.35
LINC02549-201ENST00000445346 ATN1P54259 1190 aaPredicted RBP12.84□□□□□ -0.35
LINC02549-201ENST00000445346 SGIP1Q9BQI5 828 aa12.84□□□□□ -0.35
LINC02549-201ENST00000445346 CAMSAP1Q5T5Y3 1602 aa12.84□□□□□ -0.35
LINC02549-201ENST00000445346 SAMD9LQ8IVG5 1584 aa12.83□□□□□ -0.36
LINC02549-201ENST00000445346 UBAP1LF5GYI3 381 aa12.83□□□□□ -0.36
LINC02549-201ENST00000445346 ASTLQ6HA08 431 aaPredicted RBP12.83□□□□□ -0.36
LINC02549-201ENST00000445346 LTBP4Q8N2S1 1624 aa12.83□□□□□ -0.36
LINC02549-201ENST00000445346 IQSEC2Q5JU85 1478 aa12.83□□□□□ -0.36
LINC02549-201ENST00000445346 ZNF335Q9H4Z2 1342 aaPredicted RBP12.83□□□□□ -0.36
LINC02549-201ENST00000445346 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.36
LINC02549-201ENST00000445346 FYCO1Q9BQS8 1478 aa12.82□□□□□ -0.36
LINC02549-201ENST00000445346 GPATCH8Q9UKJ3 1502 aaKnown RBP12.82□□□□□ -0.36
LINC02549-201ENST00000445346 CDC42BPAQ5VT25 1732 aa12.82□□□□□ -0.36
LINC02549-201ENST00000445346 CCNB3Q8WWL7 1395 aa12.81□□□□□ -0.36
LINC02549-201ENST00000445346 SPATA31D1Q6ZQQ2 1576 aa12.81□□□□□ -0.36
LINC02549-201ENST00000445346 TTLL13PA6NNM8 815 aa12.81□□□□□ -0.36
LINC02549-201ENST00000445346 RGL2O15211 777 aa12.81□□□□□ -0.36
LINC02549-201ENST00000445346 A2MP01023 1474 aa12.8□□□□□ -0.36
LINC02549-201ENST00000445346 PLEKHH2Q8IVE3 1493 aa12.8□□□□□ -0.36
LINC02549-201ENST00000445346 SUPT6HQ7KZ85 1726 aaKnown RBP12.8□□□□□ -0.36
LINC02549-201ENST00000445346 KIAA1107Q9UPP5 1409 aa12.79□□□□□ -0.36
LINC02549-201ENST00000445346 MROH2AA6NES4 1674 aa12.79□□□□□ -0.36
LINC02549-201ENST00000445346 MTUS2Q5JR59 1369 aa12.79□□□□□ -0.36
LINC02549-201ENST00000445346 ATP7AQ04656 1500 aa12.78□□□□□ -0.36
LINC02549-201ENST00000445346 TIE1P35590 1138 aa12.77□□□□□ -0.37
LINC02549-201ENST00000445346 DCBLD2Q96PD2 775 aa12.77□□□□□ -0.37
LINC02549-201ENST00000445346 PTPRKQ15262 1439 aa12.77□□□□□ -0.37
LINC02549-201ENST00000445346 CLTCQ00610 1675 aaKnown RBP12.77□□□□□ -0.37
LINC02549-201ENST00000445346 PLA2R1Q13018 1463 aa12.76□□□□□ -0.37
LINC02549-201ENST00000445346 POTEFA5A3E0 1075 aa12.75□□□□□ -0.37
LINC02549-201ENST00000445346 ECM2O94769 699 aaPredicted RBP12.75□□□□□ -0.37
LINC02549-201ENST00000445346 ZNF644Q9H582 1327 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms